Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 0.0e+00 1347.0 688 100.0
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 0.0e+00 1248.4 691 94.2
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 0.0e+00 1247.3 704 92.3
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 0.0e+00 1234.9 691 93.8
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 0.0e+00 1230.3 688 92.4
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 0.0e+00 1194.1 702 89.2
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 0.0e+00 1180.2 679 90.6
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 0.0e+00 1077.4 700 81.4
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 2.1e-222 776.2 719 60.6
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 7.9e-209 731.1 720 59.0
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 1.3e-203 713.8 596 65.9
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 9.5e-154 548.1 670 50.4
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 3.9e-139 499.6 691 48.2
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 3.9e-139 499.6 706 44.8
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 2.1e-137 493.8 670 46.6
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 1.4e-133 481.1 676 47.6
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 1.1e-130 471.5 671 44.7
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 2.5e-130 470.3 675 46.2
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 7.3e-130 468.8 670 44.9
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 2.8e-129 466.8 681 44.8
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 1.8e-128 464.2 668 44.3
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 3.1e-128 463.4 679 45.1
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 6.8e-128 462.2 639 44.8
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.3e-123 448.0 627 45.8
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 1.3e-123 448.0 627 45.8
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 4.3e-122 443.0 627 45.6
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 3.1e-120 436.8 577 47.8
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 2.6e-119 433.7 659 44.6
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 4.6e-116 422.9 636 43.4
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 1.0e-115 421.8 637 43.6
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 3.9e-115 419.9 627 44.5
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 3.9e-115 419.9 665 43.9
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 1.1e-114 418.3 715 41.3
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 5.6e-114 416.0 714 40.2
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 2.0e-111 407.5 673 42.5
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 4.9e-110 402.9 628 43.5
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 9.3e-109 398.7 560 47.1
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 2.1e-108 397.5 631 41.8
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 2.7e-108 397.1 655 41.8
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 3.5e-108 396.7 723 40.1
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 1.0e-107 395.2 652 41.7
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 1.3e-107 394.8 640 42.5
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 1.8e-107 394.4 665 40.8
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 7.4e-106 389.0 635 41.4
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 2.8e-105 387.1 616 42.2
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 3.7e-105 386.7 674 39.6
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 8.1e-105 385.6 616 42.2
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 2.4e-104 384.0 678 40.6
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 3.1e-104 383.6 638 41.7
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 4.0e-104 383.3 605 42.6
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 1.2e-103 381.7 672 40.6
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 2.0e-103 380.9 620 41.1
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 2.1e-100 370.9 714 39.5
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 7.4e-98 362.5 675 39.6
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 2.8e-97 360.5 655 41.1
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 2.0e-95 354.4 613 39.3
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 1.7e-94 351.3 622 39.1
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 1.1e-93 348.6 673 38.8
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 1.9e-93 347.8 698 37.5
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 3.9e-91 340.1 641 38.4
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 2.4e-88 330.9 653 36.8
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 4.1e-88 330.1 700 36.4
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 1.0e-86 325.5 632 37.8
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 3.8e-86 323.6 668 36.1
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 7.2e-85 319.3 367 52.6
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 1.6e-84 318.2 632 37.2
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 2.1e-84 317.8 445 44.7
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 1.8e-83 314.7 588 39.3
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 3.0e-83 313.9 607 38.9
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 7.4e-82 309.3 447 43.4
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 2.2e-81 307.8 611 38.0
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 4.1e-80 303.5 552 39.5
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 5.3e-80 303.1 573 37.3
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 9.1e-80 302.4 768 33.6
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 3.4e-79 300.4 611 37.5
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 1.9e-77 294.7 566 37.3
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 1.9e-77 294.7 620 35.8
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 9.4e-77 292.4 682 34.6
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 9.4e-77 292.4 443 40.9
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 2.7e-76 290.8 593 36.1
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 3.6e-68 263.8 701 33.4
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 5.2e-67 260.0 643 35.1
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 6.7e-67 259.6 641 35.4
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 9.7e-66 255.8 648 34.3
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 8.5e-62 242.7 637 35.5
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 7.2e-61 239.6 585 34.5
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 8.0e-60 236.1 624 34.3
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 4.4e-58 230.3 587 33.6
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 7.5e-58 229.6 689 32.9
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 7.5e-58 229.6 631 32.6
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 9.7e-58 229.2 661 33.1
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 2.2e-57 228.0 483 38.1
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 6.3e-57 226.5 671 32.2
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 4.1e-56 223.8 615 34.5
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 5.3e-56 223.4 592 33.8
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 7.0e-56 223.0 417 40.0
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 1.0e-54 219.2 561 35.3
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 3.8e-54 217.2 506 34.6
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 8.5e-54 216.1 508 34.6
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 8.5e-54 216.1 698 33.2
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 8.5e-54 216.1 646 32.7
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 4.2e-53 213.8 508 34.6
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 5.5e-53 213.4 603 33.5
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 2.1e-52 211.5 547 34.4
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 2.7e-52 211.1 554 34.1
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 2.7e-52 211.1 668 32.9
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 3.6e-52 210.7 640 34.2
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 4.7e-52 210.3 554 34.3
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 4.1e-48 197.2 640 30.5
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 5.4e-48 196.8 527 33.4
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 9.1e-48 196.1 651 30.3
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 2.5e-37 161.4 484 29.5
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 3.6e-36 157.5 656 28.2
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 3.1e-35 154.5 228 43.0
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 1.3e-33 149.1 423 31.4
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 2.9e-25 121.3 190 40.0
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 7.1e-24 116.7 300 31.7
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 2.1e-20 105.1 489 27.2
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 8.9e-11 73.2 135 35.6
Zm00001eb203960 Zea mays HOM05D006267 ORTHO05D007490 2.0e-10 72.0 328 25.3
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 2.9e-09 68.2 217 28.6
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 1.0e-06 59.7 95 40.0
SEGI_39127 Sequoiadendron giganteum HOM05D006267 ORTHO05D007490 8.7e-06 56.6 228 24.1


User provided reference genes

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