Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G0942 Fragaria x ananassa HOM05D008921 ORTHO05D010506 4.2e-68 261.2 124 100.0
FAN04G2975 Fragaria x ananassa HOM05D008921 ORTHO05D010506 3.3e-65 251.5 124 96.8
FvH4_5g06300 Fragaria vesca HOM05D008921 ORTHO05D010506 5.6e-65 250.8 124 95.2
FAN18G0512 Fragaria x ananassa HOM05D008921 ORTHO05D010506 5.6e-65 250.8 124 95.2
RcHm_v2.0_Chr7g0192561 Rosa chinensis HOM05D008921 ORTHO05D010506 1.2e-54 216.5 128 84.4
FAN13G1719 Fragaria x ananassa HOM05D008921 ORTHO05D010506 9.0e-47 190.3 105 87.6
Prupe.6G157600 Prunus persica HOM05D008921 ORTHO05D010506 2.0e-33 146.0 117 65.0
Prupe.5G165500 Prunus persica HOM05D008921 ORTHO05D010506 2.6e-30 135.6 120 61.7
Hma1.2p1_0046F.1_g027140 Hydrangea macrophylla HOM05D008921 ORTHO05D010506 1.6e-19 99.8 112 47.3
CSS0048204 Camellia sinensis var. sinensis HOM05D008921 ORTHO05D010506 3.6e-19 98.6 112 49.1
Cfa019218 Carpinus fangiana HOM05D008921 ORTHO05D010506 2.2e-16 89.4 130 40.0
Haze_07588 Corylus avellana HOM05D008921 ORTHO05D010506 2.2e-16 89.4 129 44.2
Cfa019220 Carpinus fangiana HOM05D008921 ORTHO05D010506 3.7e-16 88.6 126 44.4
Sabra12G0061700 Salix brachista HOM05D008921 ORTHO05D010506 1.2e-14 83.6 119 44.5
Potri.012G085800 Populus trichocarpa HOM05D008921 ORTHO05D010506 7.7e-14 80.9 112 42.0
Thecc.03G025900 Theobroma cacao HOM05D008921 ORTHO05D010506 1.2e-11 73.6 136 41.9
Atru.chr9.2579 Acer truncatum HOM05D008921 ORTHO05D010506 1.6e-11 73.2 130 39.2
Cpa.g.sc159.19 Carica papaya HOM05D008921 ORTHO05D010506 8.0e-11 70.9 123 35.8
Lj5g0011006 Lotus japonicus HOM05D010415 ORTHO05D013002 2.3e-10 69.3 110 39.1
Manes.14G060500 Manihot esculenta HOM05D008921 ORTHO05D010506 4.0e-10 68.6 111 36.9
TAR622G0966 Trochodendron aralioides HOM05D008921 ORTHO05D010506 6.8e-10 67.8 132 35.6
COL.COLO4_36759 Corchorus olitorius HOM05D008921 ORTHO05D010506 1.5e-09 66.6 127 36.2
Gorai.003G115500 Gossypium raimondii HOM05D008921 ORTHO05D010506 2.0e-09 66.2 128 38.3
Gohir.D03G109400 Gossypium hirsutum HOM05D008921 ORTHO05D010506 9.8e-09 63.9 128 37.5
Nitab4.5_0000025g0320 Nicotiana tabacum HOM05D012681 ORTHO05D010506 9.8e-09 63.9 117 33.3
Aqoxy5G03744 Aquilegia oxysepala HOM05D008921 ORTHO05D010506 1.3e-08 63.5 117 39.3
Peaxi162Scf00801g00022 Petunia axillaris HOM05D012681 ORTHO05D010506 2.2e-08 62.8 115 36.5
Rhsim08G0177800 Rhododendron simsii HOM05D008921 ORTHO05D010506 2.2e-08 62.8 103 36.9
Nitab4.5_0001566g0030 Nicotiana tabacum HOM05D012681 ORTHO05D010506 1.1e-07 60.5 124 33.9
Glyma.17G084600 Glycine max HOM05D010415 ORTHO05D013002 3.1e-07 58.9 109 35.8
Phvul.003G205100 Phaseolus vulgaris HOM05D010415 ORTHO05D013002 1.2e-06 57.0 109 36.7
Nitab4.5_0001793g0040 Nicotiana tabacum HOM05D012681 ORTHO05D010506 1.6e-06 56.6 108 32.4
Nitab4.5_0010452g0020 Nicotiana tabacum HOM05D016190 ORTHO05D017486 1.6e-06 56.6 130 35.4
Nitab4.5_0010452g0050 Nicotiana tabacum HOM05D012681 ORTHO05D010506 2.0e-06 56.2 125 32.0
Peaxi162Scf00089g00137 Petunia axillaris HOM05D012681 ORTHO05D010506 2.0e-06 56.2 110 33.6
Medtr3g076950 Medicago truncatula HOM05D010415 ORTHO05D013002 2.7e-06 55.8 116 38.8


User provided reference genes

Program Settings