Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.1e-128 461.8 235 100.0
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 6.2e-121 437.6 235 95.7
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.5e-116 421.8 233 92.3
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.2e-110 402.5 262 82.1
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 1.2e-105 386.7 242 83.5
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 9.3e-93 344.0 240 72.9
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 4.0e-88 328.6 238 71.0
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 4.0e-88 328.6 241 71.4
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 6.9e-88 327.8 235 71.9
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 2.0e-87 326.2 243 69.5
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 3.4e-87 325.5 243 70.4
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 1.3e-86 323.6 231 72.3
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 1.3e-86 323.6 234 70.9
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 2.9e-86 322.4 232 71.1
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 3.8e-86 322.0 236 70.3
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 3.8e-86 322.0 241 71.0
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 1.1e-85 320.5 236 69.1
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 1.4e-85 320.1 236 70.8
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.9e-85 319.7 235 68.1
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 4.2e-85 318.5 239 66.9
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 5.5e-85 318.2 239 69.0
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.1e-84 316.2 235 68.5
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 2.1e-84 316.2 240 67.9
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 2.7e-84 315.8 240 69.2
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 7.9e-84 314.3 235 68.5
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 7.9e-84 314.3 231 67.5
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 1.0e-83 313.9 236 68.6
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.0e-83 313.9 232 69.0
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 1.3e-83 313.5 234 67.9
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 1.8e-83 313.2 230 68.7
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 2.3e-83 312.8 229 69.0
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.3e-83 312.8 241 65.1
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 2.3e-83 312.8 239 66.9
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 2.3e-83 312.8 236 67.4
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 2.3e-83 312.8 234 67.9
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 3.0e-83 312.4 231 67.1
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 6.7e-83 311.2 227 69.2
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 6.7e-83 311.2 227 69.2
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 8.7e-83 310.8 239 67.8
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 1.1e-82 310.5 235 68.5
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 1.9e-82 309.7 236 68.2
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 1.9e-82 309.7 227 69.6
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 2.5e-82 309.3 237 67.9
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 2.5e-82 309.3 241 65.1
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 3.3e-82 308.9 235 67.2
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 3.3e-82 308.9 238 66.4
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 5.6e-82 308.1 231 66.2
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 7.4e-82 307.8 249 65.1
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 7.4e-82 307.8 236 66.9
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 9.6e-82 307.4 235 66.8
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 1.3e-81 307.0 243 66.7
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 4.8e-81 305.1 242 65.7
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 8.1e-81 304.3 239 66.5
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 1.4e-80 303.5 230 66.5
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 1.4e-80 303.5 231 68.4
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 1.8e-80 303.1 230 67.4
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 2.4e-80 302.8 231 67.1
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 4.0e-80 302.0 239 66.9
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 9.0e-80 300.8 231 66.7
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 9.0e-80 300.8 248 64.9
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 9.0e-80 300.8 237 65.0
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 9.0e-80 300.8 251 61.4
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 1.2e-79 300.4 231 66.2
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 1.5e-79 300.1 243 64.6
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 4.5e-79 298.5 243 63.8
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 4.5e-79 298.5 243 63.8
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 4.5e-79 298.5 275 60.0
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 1.0e-78 297.4 279 59.5
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 6.5e-78 294.7 236 64.8
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 8.4e-78 294.3 224 67.9
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 1.4e-77 293.5 240 63.8
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 1.9e-77 293.1 236 63.6
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 3.2e-77 292.4 232 61.6
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 2.7e-76 289.3 226 65.0
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 2.7e-76 289.3 231 63.6
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 2.7e-76 289.3 244 62.3
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 7.9e-76 287.7 230 63.9
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 7.9e-76 287.7 288 54.9
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 1.3e-75 287.0 246 63.0
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 3.9e-75 285.4 229 63.8
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 1.1e-74 283.9 184 73.4
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 4.3e-74 282.0 239 61.5
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.3e-73 280.4 306 53.3
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 2.1e-73 279.6 236 63.1
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 2.8e-73 279.3 227 63.9
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 1.5e-71 273.5 201 70.6
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 2.9e-70 269.2 237 57.4
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 3.2e-69 265.8 190 68.9
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 4.6e-68 261.9 238 57.1
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 1.5e-66 256.9 232 56.5
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 3.3e-66 255.8 234 59.4
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 3.3e-66 255.8 239 57.3
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 1.2e-63 247.3 192 66.1
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 2.0e-63 246.5 169 72.2
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 5.0e-62 241.9 187 64.2
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 1.2e-60 237.3 186 62.9
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 1.6e-60 236.9 197 57.9
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.7e-60 236.1 193 63.7
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 2.0e-58 229.9 381 39.4
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 4.1e-56 222.2 230 53.9
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 1.4e-53 213.8 203 54.7
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 9.4e-45 184.5 155 63.9
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 2.1e-44 183.3 149 65.1
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 2.1e-44 183.3 158 62.0
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 2.7e-44 183.0 189 49.2
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 8.8e-43 177.9 95 94.7
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 1.4e-35 154.1 165 54.5
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 1.5e-34 150.6 140 59.3
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 1.5e-34 150.6 140 59.3
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 3.7e-33 146.0 224 38.4
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 1.3e-30 137.5 137 56.9
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 2.2e-30 136.7 202 38.6
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 3.7e-25 119.4 156 48.1
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 3.1e-24 116.3 156 47.4
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 7.3e-21 105.1 86 60.5
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 3.6e-20 102.8 108 56.5
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 6.1e-20 102.1 160 39.4
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 8.0e-20 101.7 59 76.3
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 1.7e-17 94.0 93 58.1
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 3.5e-15 86.3 102 50.0
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 2.9e-09 66.6 47 63.8
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 4.9e-09 65.9 76 46.1


User provided reference genes

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