Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G0833 Fragaria x ananassa HOM05D005661 ORTHO05D203111 5.6e-59 230.7 114 100.0
FAN08G1519 Fragaria x ananassa HOM05D005661 ORTHO05D210776 1.3e-20 103.2 87 66.7
FAN08G1685 Fragaria x ananassa HOM05D005661 ORTHO05D007997 2.1e-13 79.3 65 69.2
FvH4_5g27480 Fragaria vesca HOM05D005661 ORTHO05D007997 6.0e-13 77.8 66 68.2
RcHm_v2.0_Chr7g0218881 Rosa chinensis HOM05D005661 ORTHO05D007997 6.0e-13 77.8 66 68.2
FAN04G2212 Fragaria x ananassa HOM05D005661 ORTHO05D007997 1.8e-12 76.3 66 68.2
Prupe.1G586600 Prunus persica HOM05D005661 ORTHO05D007997 3.9e-12 75.1 68 66.2
FAN13G1518 Fragaria x ananassa HOM05D005661 ORTHO05D007997 6.7e-12 74.3 63 68.3
FAN08G3692 Fragaria x ananassa HOM05D005661 ORTHO05D208506 8.7e-12 73.9 52 76.9
CAN.G1379.8 Capsicum annuum HOM05D005661 ORTHO05D007997 1.5e-11 73.2 69 60.9
SGA_v2.0_scaffold131G34439 Striga asiatica HOM05D005661 ORTHO05D007997 3.3e-11 72.0 66 62.1
Nitab4.5_0006159g0030 Nicotiana tabacum HOM05D005661 ORTHO05D007997 7.4e-11 70.9 68 60.3
Solyc01g102820.4 Solanum lycopersicum HOM05D005661 ORTHO05D007997 7.4e-11 70.9 68 60.3
Sopen01g045220 Solanum pennellii HOM05D005661 ORTHO05D007997 7.4e-11 70.9 68 60.3
MD08G1249400 Malus domestica HOM05D005661 ORTHO05D007997 9.6e-11 70.5 70 62.9
PGSC0003DMG401018218 Solanum tuberosum HOM05D005661 ORTHO05D007997 9.6e-11 70.5 68 60.3
arahy.Tifrunner.gnm1.ann1.FQN863 Arachis hypogaea HOM05D005661 ORTHO05D007997 2.1e-10 69.3 64 67.2
Medtr4g134540 Medicago truncatula HOM05D005661 ORTHO05D007997 2.1e-10 69.3 65 66.2
Nitab4.5_0001085g0130 Nicotiana tabacum HOM05D005661 ORTHO05D007997 2.1e-10 69.3 68 58.8
Atru.chr6.139 Acer truncatum HOM05D005661 ORTHO05D007997 3.6e-10 68.6 63 63.5
MSTRG.20341 Avicennia marina HOM05D005661 ORTHO05D007997 3.6e-10 68.6 62 64.5
Lsat_1_v5_gn_9_124861 Lactuca sativa HOM05D005661 ORTHO05D007997 3.6e-10 68.6 68 63.2
Oeu000159.1 Olea europaea HOM05D005661 ORTHO05D007997 3.6e-10 68.6 62 64.5
Ah.02g128470 Amaranthus hybridus HOM05D005661 ORTHO05D007997 4.8e-10 68.2 77 55.8
arahy.Tifrunner.gnm1.ann1.PPAS6H Arachis hypogaea HOM05D005661 ORTHO05D007997 4.8e-10 68.2 64 65.6
CSS0021874 Camellia sinensis var. sinensis HOM05D005661 ORTHO05D007997 4.8e-10 68.2 63 65.1
Cpa.g.sc173.2 Carica papaya HOM05D005661 ORTHO05D007997 6.2e-10 67.8 66 60.6
HanXRQChr09g0249911 Helianthus annuus HOM05D005661 ORTHO05D007997 6.2e-10 67.8 38 86.8
Psat0s2555g0200 Pisum sativum HOM05D005661 ORTHO05D007997 8.1e-10 67.4 61 65.6
Dinv38445 Davidia involucrata HOM05D005661 ORTHO05D007997 1.1e-09 67.0 63 65.1
Peaxi162Scf00194g01045 Petunia axillaris HOM05D005661 ORTHO05D007997 1.1e-09 67.0 62 64.5
Rhsim11G0115300 Rhododendron simsii HOM05D005661 ORTHO05D007997 1.1e-09 67.0 69 59.4
MD15G1444200 Malus domestica HOM05D005661 ORTHO05D007997 1.4e-09 66.6 67 62.7
QL02p103676 Quercus lobata HOM05D005661 ORTHO05D007997 1.4e-09 66.6 82 52.4
vmacro01624 Vaccinium macrocarpon HOM05D005661 ORTHO05D007997 1.4e-09 66.6 63 65.1
Actinidia11729 Actinidia chinensis HOM05D005661 ORTHO05D007997 1.8e-09 66.2 63 65.1
TPR.G5996 Trifolium pratense HOM05D005661 ORTHO05D007997 1.8e-09 66.2 80 52.5
Aqoxy1G02010 Aquilegia oxysepala HOM05D005661 ORTHO05D007997 2.4e-09 65.9 99 49.5
AT2G02500 Arabidopsis thaliana HOM05D005661 ORTHO05D007997 2.4e-09 65.9 65 55.4
MSTRG.16459 Avicennia marina HOM05D005661 ORTHO05D007997 2.4e-09 65.9 38 81.6
A02p32920 Brassica napus HOM05D005661 ORTHO05D007997 2.4e-09 65.9 61 55.7
Ciclev10002035m.g Citrus clementina HOM05D005661 ORTHO05D007997 2.4e-09 65.9 63 60.3
arahy.Tifrunner.gnm1.ann1.H0NKK3 Arachis hypogaea HOM05D005661 ORTHO05D007997 3.1e-09 65.5 74 55.4
CARHR145060 Cardamine hirsuta HOM05D005661 ORTHO05D007997 3.1e-09 65.5 64 57.8
Cc02_g23630 Coffea canephora HOM05D005661 ORTHO05D007997 3.1e-09 65.5 69 52.2
DCAR_001732 Daucus carota HOM05D005661 ORTHO05D007997 3.1e-09 65.5 38 84.2
DCAR_031998 Daucus carota HOM05D005661 ORTHO05D007997 3.1e-09 65.5 54 63.0
CsaV3_3G006740 Cucumis sativus L. HOM05D005661 ORTHO05D007997 4.0e-09 65.1 63 65.1
HanXRQChr05g0153021 Helianthus annuus HOM05D005661 ORTHO05D007997 4.0e-09 65.1 64 62.5
Lj5A292T55 Lonicera japonica HOM05D005661 ORTHO05D007997 4.0e-09 65.1 37 86.5
GSVIVG01023131001 Vitis vinifera HOM05D005661 ORTHO05D007997 4.0e-09 65.1 76 52.6
CiPaw.06G177000 Carya illinoinensis HOM05D005661 ORTHO05D007997 5.3e-09 64.7 66 60.6
Dinv29650 Davidia involucrata HOM05D005661 ORTHO05D007997 5.3e-09 64.7 53 64.2
ECA246G0516 Erigeron canadensis HOM05D005661 ORTHO05D007997 5.3e-09 64.7 61 63.9
MBI06_g17067_MAGBIO Magnolia biondii HOM05D005661 ORTHO05D007997 5.3e-09 64.7 66 62.1
PGR142G1782 Punica granatum HOM05D005661 ORTHO05D007997 5.3e-09 64.7 63 61.9
AL5G11770 Arabidopsis lyrata HOM05D005661 ORTHO05D007997 6.9e-09 64.3 65 53.8
ClCG10G007530 Citrullus lanatus HOM05D005661 ORTHO05D007997 6.9e-09 64.3 63 61.9
Eucgr.I02806 Eucalyptus grandis HOM05D005661 ORTHO05D007997 6.9e-09 64.3 38 84.2
Thhalv10004647m.g Eutrema salsugineum HOM05D005661 ORTHO05D007997 6.9e-09 64.3 65 53.8
Lj4g0018255 Lotus japonicus HOM05D005661 ORTHO05D007997 6.9e-09 64.3 38 81.6
Manes.14G166900 Manihot esculenta HOM05D005661 ORTHO05D007997 6.9e-09 64.3 63 61.9
PSO210G4998 Papaver somniferum HOM05D005661 ORTHO05D007997 6.9e-09 64.3 61 63.9
Aa31LG2G7610 Aethionema arabicum HOM05D005661 ORTHO05D007997 9.0e-09 63.9 60 58.3
Nn5g27134 Nelumbo nucifera HOM05D005661 ORTHO05D007997 9.0e-09 63.9 38 81.6
EL10Ac6g13962 Beta vulgaris HOM05D005661 ORTHO05D007997 1.2e-08 63.5 63 60.3
Carub.0005s0153 Capsella rubella HOM05D005661 ORTHO05D007997 1.2e-08 63.5 65 53.8
AUR62032486 Chenopodium quinoa HOM05D005661 ORTHO05D007997 1.2e-08 63.5 64 59.4
MELO3C016431.2 Cucumis melo HOM05D005661 ORTHO05D007997 1.2e-08 63.5 63 63.5
Migut.B00706 Erythranthe guttata HOM05D005661 ORTHO05D007997 1.2e-08 63.5 54 63.0
Lalb_Chr07g0176831 Lupinus albus HOM05D005661 ORTHO05D007997 1.2e-08 63.5 64 60.9
Cfa004424 Carpinus fangiana HOM05D005661 ORTHO05D007997 1.5e-08 63.2 64 59.4
Manes.14G146200 Manihot esculenta HOM05D005661 ORTHO05D007997 1.5e-08 63.2 63 60.3
Potri.004G230200 Populus trichocarpa HOM05D005661 ORTHO05D007997 1.5e-08 63.2 63 60.3
Sp2g13750 Schrenkiella parvula HOM05D005661 ORTHO05D007997 1.5e-08 63.2 65 52.3
unitig_21.g20570 Utricularia gibba HOM05D005661 ORTHO05D007997 1.5e-08 63.2 38 78.9
Glyma.17G002400 Glycine max HOM05D005661 ORTHO05D007997 2.0e-08 62.8 68 54.4
Sabra01G0175500 Salix brachista HOM05D005661 ORTHO05D007997 2.0e-08 62.8 61 60.7
Sed0000786 Sechium edule HOM05D005661 ORTHO05D007997 2.0e-08 62.8 60 63.3
Thecc.06G064100 Theobroma cacao HOM05D005661 ORTHO05D007997 2.0e-08 62.8 63 61.9
Actinidia00142 Actinidia chinensis HOM05D005661 ORTHO05D007997 2.6e-08 62.4 38 81.6
BcaB07g30331 Brassica carinata HOM05D005661 ORTHO05D007997 2.6e-08 62.4 37 75.7
SMO367G1090 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 2.6e-08 62.4 40 72.5
TAR628G0241 Trochodendron aralioides HOM05D005661 ORTHO05D007997 2.6e-08 62.4 76 53.9
Gorai.010G134700 Gossypium raimondii HOM05D005661 ORTHO05D007997 3.4e-08 62.0 63 58.7
ATR1089G013 Amborella trichopoda HOM05D005661 ORTHO05D007997 5.8e-08 61.2 38 76.3
Gohir.D06G117100 Gossypium hirsutum HOM05D005661 ORTHO05D007997 5.8e-08 61.2 38 78.9
Phvul.003G090900 Phaseolus vulgaris HOM05D005661 ORTHO05D007997 5.8e-08 61.2 61 59.0
TWI23G0175 Tripterygium wilfordii HOM05D005661 ORTHO05D007997 5.8e-08 61.2 61 59.0
C02p50650 Brassica napus HOM05D005661 ORTHO05D007997 7.6e-08 60.8 61 54.1
Ca_13523_v3 Cicer arietinum L. HOM05D005661 ORTHO05D007997 7.6e-08 60.8 37 78.4
AUR62042241 Chenopodium quinoa HOM05D005661 ORTHO05D007997 9.9e-08 60.5 67 53.7
THA.LOC104801778 Tarenaya hassleriana HOM05D005661 ORTHO05D007997 9.9e-08 60.5 65 52.3
BcaC03g17145 Brassica carinata HOM05D005661 ORTHO05D007997 1.3e-07 60.1 65 50.8
Gohir.A06G112500 Gossypium hirsutum HOM05D005661 ORTHO05D007997 1.3e-07 60.1 63 57.1
Sc09g0007750 Simmondsia chinensis HOM05D005661 ORTHO05D007997 1.3e-07 60.1 61 59.0
BolC2t11148H Brassica oleracea HOM05D005661 ORTHO05D007997 1.7e-07 59.7 61 52.5
BraA02t08315Z Brassica rapa HOM05D005661 ORTHO05D007997 1.7e-07 59.7 61 52.5
CANSAT01G0358 Cannabis sativa HOM05D005661 ORTHO05D007997 1.7e-07 59.7 38 76.3
COL.COLO4_31208 Corchorus olitorius HOM05D005661 ORTHO05D007997 1.7e-07 59.7 37 78.4
Hund15335 Selenicereus undatus HOM05D005661 ORTHO05D007997 1.7e-07 59.7 37 78.4
Zm00001eb365960 Zea mays HOM05D005661 ORTHO05D007997 1.7e-07 59.7 97 40.2
AagrBONN_evm.TU.Sc2ySwM_362.430 Anthoceros agrestis HOM05D005661 ORTHO05D007997 2.2e-07 59.3 38 71.1
CDE04G2298 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 2.9e-07 58.9 38 76.3
VMungo1215G1111 Vigna mungo HOM05D005661 ORTHO05D007997 3.8e-07 58.5 61 55.7
Zm00001eb145390 Zea mays HOM05D005661 ORTHO05D007997 4.9e-07 58.2 76 50.0
Pp3c15_1010 Physcomitrium patens HOM05D005661 ORTHO05D007997 1.1e-06 57.0 38 71.1
Pp3c9_590 Physcomitrium patens HOM05D005661 ORTHO05D007997 1.1e-06 57.0 38 71.1
Mapoly0006s0146 Marchantia polymorpha HOM05D005661 ORTHO05D007997 1.9e-06 56.2 38 73.7
CDE02G0980 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 2.4e-06 55.8 38 73.7
SEGI_39309 Sequoiadendron giganteum HOM05D005661 ORTHO05D007997 4.2e-06 55.1 38 71.1


User provided reference genes

Program Settings