Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G0634 Fragaria x ananassa HOM05D003548 ORTHO05D029492 1.8e-93 345.9 174 100.0
FAN04G1462 Fragaria x ananassa HOM05D003548 ORTHO05D004066 6.5e-51 204.5 107 95.3
FAN13G0102 Fragaria x ananassa HOM05D003548 ORTHO05D004066 1.6e-49 199.9 107 93.5
FAN08G0160 Fragaria x ananassa HOM05D025012 ORTHO05D017939 2.1e-49 199.5 202 59.4
FAN18G1037 Fragaria x ananassa HOM05D003548 ORTHO05D004066 4.7e-49 198.4 107 92.5
FAN04G2241 Fragaria x ananassa HOM05D003548 ORTHO05D004066 1.0e-48 197.2 106 92.5
FvH4_5g03650 Fragaria vesca HOM05D003548 ORTHO05D004066 1.4e-48 196.8 107 91.6
FAN13G1218 Fragaria x ananassa HOM05D003548 ORTHO05D004066 3.1e-45 185.7 106 89.6
RcHm_v2.0_Chr7g0196091 Rosa chinensis HOM05D003548 ORTHO05D004066 1.1e-26 124.0 82 81.7
Prupe.5G110700 Prunus persica HOM05D003548 ORTHO05D004066 1.4e-21 107.1 116 52.6
FAN18G3076 Fragaria x ananassa HOM05D025012 ORTHO05D017939 2.0e-20 103.2 57 87.7
MD06G1096100 Malus domestica HOM05D003548 ORTHO05D004066 2.7e-20 102.8 117 53.8
MD14G1116300 Malus domestica HOM05D003548 ORTHO05D004066 1.6e-17 93.6 117 52.1
Duzib205G0585 Durio zibethinus HOM05D003548 ORTHO05D004066 3.4e-15 85.9 126 45.2
Haze_08718 Corylus avellana HOM05D003548 ORTHO05D004066 9.8e-15 84.3 118 46.6
Thecc.03G289200 Theobroma cacao HOM05D003548 ORTHO05D004066 1.7e-14 83.6 126 44.4
Cfa012267 Carpinus fangiana HOM05D003548 ORTHO05D004066 8.3e-14 81.3 117 46.2
Duzib068G0600 Durio zibethinus HOM05D003548 ORTHO05D004066 3.2e-13 79.3 126 42.9
Atru.chr9.2080 Acer truncatum HOM05D003548 ORTHO05D004066 4.1e-13 79.0 122 45.9
Manes.02G014900 Manihot esculenta HOM05D003548 ORTHO05D004066 1.6e-12 77.0 129 42.6
Lj4g0009292 Lotus japonicus HOM05D003548 ORTHO05D004066 6.0e-12 75.1 124 42.7
Glyma.05G213300 Glycine max HOM05D003548 ORTHO05D004066 1.0e-11 74.3 136 39.0
Peaxi162Scf00102g01614 Petunia axillaris HOM05D003548 ORTHO05D004066 1.0e-11 74.3 119 40.3
Ciclev10019140m.g Citrus clementina HOM05D003548 ORTHO05D004066 1.7e-11 73.6 129 42.6
Gohir.A02G103700 Gossypium hirsutum HOM05D003548 ORTHO05D004066 1.7e-11 73.6 126 44.4
Gohir.A09G191100 Gossypium hirsutum HOM05D003548 ORTHO05D004066 1.7e-11 73.6 127 43.3
Gohir.D03G080200 Gossypium hirsutum HOM05D003548 ORTHO05D004066 3.0e-11 72.8 126 42.9
Gorai.003G083700 Gossypium raimondii HOM05D003548 ORTHO05D004066 3.9e-11 72.4 126 42.9
VMungo0251G1700 Vigna mungo HOM05D003548 ORTHO05D004066 3.9e-11 72.4 133 39.8
Glyma.08G019800 Glycine max HOM05D003548 ORTHO05D004066 1.1e-10 70.9 136 39.7
Potri.001G097200 Populus trichocarpa HOM05D003548 ORTHO05D004066 1.1e-10 70.9 129 38.8
Sabra01G0072500 Salix brachista HOM05D003548 ORTHO05D004066 1.5e-10 70.5 127 37.8
CiPaw.11G126900 Carya illinoinensis HOM05D003548 ORTHO05D004066 1.9e-10 70.1 126 39.7
Potri.003G134200 Populus trichocarpa HOM05D003548 ORTHO05D004066 2.5e-10 69.7 129 36.4
GSVIVG01019448001 Vitis vinifera HOM05D003548 ORTHO05D004066 2.5e-10 69.7 120 40.0
Gohir.D09G185600 Gossypium hirsutum HOM05D003548 ORTHO05D004066 3.3e-10 69.3 127 40.9
Gorai.006G208300 Gossypium raimondii HOM05D003548 ORTHO05D004066 3.3e-10 69.3 127 40.9
Nitab4.5_0005339g0010 Nicotiana tabacum HOM05D003548 ORTHO05D004066 3.3e-10 69.3 122 41.0
Ca_10964_v3 Cicer arietinum L. HOM05D003548 ORTHO05D004066 4.3e-10 68.9 128 40.6
TAR636G0920 Trochodendron aralioides HOM05D003548 ORTHO05D004066 4.3e-10 68.9 138 34.8
CSS0034195 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 5.6e-10 68.6 129 38.0
Dinv37570 Davidia involucrata HOM05D003548 ORTHO05D004066 9.5e-10 67.8 131 39.7
arahy.Tifrunner.gnm1.ann1.36D870 Arachis hypogaea HOM05D003548 ORTHO05D004066 1.2e-09 67.4 126 38.9
arahy.Tifrunner.gnm1.ann1.59PT6M Arachis hypogaea HOM05D003548 ORTHO05D004066 1.2e-09 67.4 125 37.6
Sopen08g030060 Solanum pennellii HOM05D003548 ORTHO05D004066 1.2e-09 67.4 122 41.8
ClCG01G002150 Citrullus lanatus HOM05D003548 ORTHO05D004066 1.6e-09 67.0 121 38.0
Sopen08g004030 Solanum pennellii HOM05D003548 ORTHO05D004066 1.6e-09 67.0 114 41.2
TWI81G0889 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 1.6e-09 67.0 108 38.9
Hma1.2p1_0216F.1_g091270 Hydrangea macrophylla HOM05D003548 ORTHO05D004066 2.8e-09 66.2 116 40.5
FvH4_1g04890 Fragaria vesca HOM05D011168 ORTHO05D029492 3.6e-09 65.9 31 93.5
Solyc08g008180.3 Solanum lycopersicum HOM05D003548 ORTHO05D004066 3.6e-09 65.9 114 38.6
PGSC0003DMG400028194 Solanum tuberosum HOM05D003548 ORTHO05D004066 3.6e-09 65.9 121 39.7
Duzib084G0464 Durio zibethinus HOM05D003548 ORTHO05D004066 4.7e-09 65.5 103 42.7
FvH4_6g38430 Fragaria vesca HOM05D011168 ORTHO05D012372 4.7e-09 65.5 30 96.7
Peaxi162Scf00074g00156 Petunia axillaris HOM05D003548 ORTHO05D004066 4.7e-09 65.5 121 40.5
Hma1.2p1_0142F.1_g064160 Hydrangea macrophylla HOM05D003548 ORTHO05D004066 8.0e-09 64.7 120 38.3
FAN19G0295 Fragaria x ananassa HOM05D011168 ORTHO05D029492 1.1e-08 64.3 30 93.3
TWI15G1126 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 1.1e-08 64.3 105 41.0
FAN17G0299 Fragaria x ananassa HOM05D025012 ORTHO05D017939 1.8e-08 63.5 37 83.8
MELO3C005727.2 Cucumis melo HOM05D003548 ORTHO05D004066 2.3e-08 63.2 121 37.2
Dinv38885 Davidia involucrata HOM05D003548 ORTHO05D004066 3.1e-08 62.8 130 43.1
Lalb_Chr16g0390341 Lupinus albus HOM05D003548 ORTHO05D004066 3.1e-08 62.8 128 39.8
Sed0003878 Sechium edule HOM05D003548 ORTHO05D004066 3.1e-08 62.8 120 35.0
CSS0019271 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 5.2e-08 62.0 122 37.7
CSS0042414 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 5.2e-08 62.0 122 37.7
CANSAT21G0595 Cannabis sativa HOM05D003548 ORTHO05D004066 5.2e-08 62.0 117 38.5
Cc08_g15520 Coffea canephora HOM05D003548 ORTHO05D004066 5.2e-08 62.0 118 37.3
COL.COLO4_08334 Corchorus olitorius HOM05D003548 ORTHO05D004066 5.2e-08 62.0 93 43.0
ECA233G1322 Erigeron canadensis HOM05D003548 ORTHO05D004066 5.2e-08 62.0 110 41.8
FAN15G3719 Fragaria x ananassa HOM05D011168 ORTHO05D029492 5.2e-08 62.0 30 93.3
CAN.G532.68 Capsicum annuum HOM05D003548 ORTHO05D004066 6.8e-08 61.6 122 38.5
QL02p032544 Quercus lobata HOM05D003548 ORTHO05D004066 6.8e-08 61.6 97 41.2
TWI60G0243 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 6.8e-08 61.6 109 39.4
Nitab4.5_0002944g0150 Nicotiana tabacum HOM05D003548 ORTHO05D004066 8.9e-08 61.2 111 41.4
Sabra03G0096600 Salix brachista HOM05D003548 ORTHO05D004066 1.2e-07 60.8 123 38.2
DCAR_008526 Daucus carota HOM05D003548 ORTHO05D004066 1.5e-07 60.5 124 34.7
Nitab4.5_0007898g0040 Nicotiana tabacum HOM05D000302 ORTHO05D000334 2.0e-07 60.1 121 37.2
PGR031G0552 Punica granatum HOM05D003548 ORTHO05D004066 2.6e-07 59.7 116 39.7
PGSC0003DMG400012172 Solanum tuberosum HOM05D003548 ORTHO05D004066 2.6e-07 59.7 123 38.2
FAN07G1692 Fragaria x ananassa HOM05D025012 ORTHO05D017939 4.4e-07 58.9 31 87.1
Eucgr.E00807 Eucalyptus grandis HOM05D003548 ORTHO05D004066 7.5e-07 58.2 100 38.0
CsaV3_5G002270 Cucumis sativus L. HOM05D003548 ORTHO05D004066 9.8e-07 57.8 121 35.5
Nitab4.5_0000966g0040 Nicotiana tabacum HOM05D000302 ORTHO05D000334 1.7e-06 57.0 122 38.5
CiPaw.12G087100 Carya illinoinensis HOM05D003548 ORTHO05D004066 2.2e-06 56.6 102 39.2
THA.LOC104809354 Tarenaya hassleriana HOM05D003548 ORTHO05D004066 2.2e-06 56.6 104 35.6
Lj2P175T19 Lonicera japonica HOM05D003548 ORTHO05D004066 3.7e-06 55.8 100 41.0
PGR042G3215 Punica granatum HOM05D003548 ORTHO05D004066 3.7e-06 55.8 117 40.2
Solyc08g081760.3 Solanum lycopersicum HOM05D003548 ORTHO05D004066 3.7e-06 55.8 106 41.5
TAR629G2865 Trochodendron aralioides HOM05D003548 ORTHO05D004066 3.7e-06 55.8 134 36.6
SalBow1G7748 Salvia bowleyana HOM05D003548 ORTHO05D004066 4.9e-06 55.5 116 35.3
Phvul.002G294600 Phaseolus vulgaris HOM05D003548 ORTHO05D004066 6.4e-06 55.1 126 34.1
Glyma.01G223400 Glycine max HOM05D003548 ORTHO05D004066 8.3e-06 54.7 99 42.4
Medtr8g099105 Medicago truncatula HOM05D003548 ORTHO05D004066 8.3e-06 54.7 125 35.2


User provided reference genes

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