Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-244 849.0 446 100.0
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-232 809.3 446 92.2
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.6e-218 761.1 390 93.1
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.7e-178 628.2 354 85.9
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 6.8e-137 491.5 372 62.9
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 1.9e-134 483.4 389 63.2
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 3.2e-134 482.6 366 62.8
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 7.1e-134 481.5 378 62.7
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 6.6e-132 474.9 397 61.5
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.6e-130 470.3 393 61.1
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 2.3e-124 449.9 216 94.9
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-122 443.4 401 56.9
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-121 439.5 397 56.7
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-121 438.7 401 57.1
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 6.9e-121 438.3 401 56.9
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-119 432.6 394 57.1
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 4.9e-119 432.2 401 56.1
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.4e-119 431.8 396 57.1
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-118 430.3 383 59.3
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 3.2e-118 429.5 386 57.3
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 3.2e-118 429.5 391 56.3
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.4e-118 428.7 380 58.9
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-114 417.5 388 55.7
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.4e-112 409.5 385 55.6
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-109 400.2 395 52.7
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-107 392.5 421 50.4
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-107 392.5 421 50.4
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.5e-104 382.5 336 57.4
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-101 373.2 380 50.8
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-99 367.9 336 57.1
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.7e-99 365.5 336 56.8
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 7.4e-99 365.2 389 50.9
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.0e-97 359.4 358 52.0
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-96 357.8 336 55.7
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-95 354.8 380 50.3
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 6.5e-95 352.1 343 54.2
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-89 332.8 381 49.1
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-84 318.2 350 48.6
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-84 317.4 395 44.8
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 1.8e-73 280.8 254 55.9
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 2.4e-73 280.4 400 41.8
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 8.2e-66 255.4 380 39.5
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-65 253.4 417 37.4
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 2.0e-64 250.8 415 37.8
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.5e-62 242.7 378 42.6
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.5e-62 242.7 378 42.6
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-60 238.0 378 42.1
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.0e-60 236.9 374 42.2
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.0e-60 236.9 327 44.0
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-59 234.2 170 62.4
FvH4_5g09162 Fragaria vesca HOM05D006732 ORTHO05D005682 9.8e-59 231.9 173 82.1
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-58 231.1 377 41.9
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.9e-56 222.6 162 61.7
FAN26G3406 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-55 221.9 200 57.5
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 1.3e-55 221.5 402 37.1
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 2.2e-55 220.7 189 56.1
FAN08G2174 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.0e-52 209.9 101 94.1
FAN23G0993 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.5e-51 205.7 163 61.3
RcHm_v2.0_Chr2g0090141 Rosa chinensis HOM05D006732 ORTHO05D005682 4.1e-49 199.9 163 58.3
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-47 194.5 351 35.9
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.2e-46 189.9 330 41.8
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-44 185.3 402 33.6
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.8e-44 182.6 205 51.7
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-42 177.6 346 37.9
RcHm_v2.0_Chr2g0089871 Rosa chinensis HOM05D006732 ORTHO05D005682 2.9e-42 177.2 140 57.9
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 6.3e-42 176.0 264 40.5
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-39 168.3 364 37.6
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-38 165.2 382 32.2
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.3e-38 162.5 333 35.4
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 3.1e-36 157.1 378 33.1
FvH4_1g07301 Fragaria vesca HOM05D006732 ORTHO05D005682 8.3e-34 149.1 105 63.8
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 2.4e-33 147.5 402 33.1
FAN23G1684 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.3e-30 137.1 179 40.2
FAN28G1694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-29 134.4 170 42.4
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 1.1e-28 132.1 423 28.4
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 1.1e-28 132.1 423 28.4
FAN23G1145 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-27 128.6 67 85.1
FAN19G1906 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-27 127.5 147 44.9
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 1.7e-26 124.8 337 32.6
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.3e-26 122.5 327 32.1
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 8.3e-26 122.5 341 31.4
FAN26G3385 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.1e-25 119.4 134 46.3
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 1.3e-23 115.2 269 33.8
FAN23G2570 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-23 114.8 83 62.7
FAN19G3146 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-22 110.9 196 37.8
FvH4_6g50450 Fragaria vesca HOM05D008398 ORTHO05D005682 3.3e-22 110.5 361 29.1
FAN19G2055 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-22 110.2 79 68.4
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 5.6e-22 109.8 217 34.1
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 5.6e-22 109.8 336 32.1
FAN23G1506 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-21 108.6 72 69.4
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 2.8e-21 107.5 236 34.3
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-21 107.1 185 34.6
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 8.1e-21 105.9 219 37.0
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-20 105.1 171 42.7
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 3.1e-20 104.0 438 25.6
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 4.0e-20 103.6 375 29.6
FAN06G1115 Fragaria x ananassa HOM05D010677 ORTHO05D012678 5.2e-20 103.2 294 26.5
FAN06G1601 Fragaria x ananassa HOM05D010677 ORTHO05D012678 5.2e-20 103.2 294 26.5
FvH4_7g27001 Fragaria vesca HOM05D010677 ORTHO05D012678 8.9e-20 102.4 436 25.5
FAN03G2148 Fragaria x ananassa HOM05D018501 ORTHO05D020617 1.2e-19 102.1 313 30.7
RcHm_v2.0_Chr1g0380941 Rosa chinensis HOM05D006732 ORTHO05D005682 1.5e-19 101.7 350 28.3
FvH4_7g31320 Fragaria vesca HOM05D010677 ORTHO05D012678 2.0e-19 101.3 315 27.9
FAN18G3618 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.0e-19 101.3 354 28.2
FAN28G2349 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-19 101.3 116 46.6
FAN28G2648 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-19 101.3 116 46.6
FAN28G1562 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.4e-19 100.5 79 60.8
RcHm_v2.0_Chr1g0337091 Rosa chinensis HOM05D010677 ORTHO05D012678 4.4e-19 100.1 359 27.0
FvH4_3g43023 Fragaria vesca HOM05D015758 ORTHO05D022659 7.6e-19 99.4 223 32.3
QL02p081954 Quercus lobata HOM05D006732 ORTHO05D005682 9.9e-19 99.0 363 25.9
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.7e-18 98.2 291 30.6
FAN10G1111 Fragaria x ananassa HOM05D000122 ORTHO05D000139 3.7e-18 97.1 300 27.3
FAN04G2845 Fragaria x ananassa HOM05D010677 ORTHO05D012678 4.9e-18 96.7 418 25.4
FvH4_6g52510 Fragaria vesca HOM05D013417 ORTHO05D022618 6.4e-18 96.3 347 29.7
FvH4_7g04500 Fragaria vesca HOM05D018501 ORTHO05D020617 6.4e-18 96.3 324 30.2
FAN06G4869 Fragaria x ananassa HOM05D018501 ORTHO05D020617 6.4e-18 96.3 340 29.7
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.4e-18 96.3 283 31.4
FAN06G1563 Fragaria x ananassa HOM05D018501 ORTHO05D020617 2.4e-17 94.4 340 29.4
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 5.4e-17 93.2 245 33.5
FvH4_7g31670 Fragaria vesca HOM05D010677 ORTHO05D012678 5.4e-17 93.2 209 33.0
FAN03G1932 Fragaria x ananassa HOM05D018501 ORTHO05D020617 1.6e-16 91.7 338 28.4
FAN06G3627 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.1e-16 91.3 320 26.2
FvH4_7g31682 Fragaria vesca HOM05D010677 ORTHO05D012678 3.5e-16 90.5 210 31.9
FAN14G4282 Fragaria x ananassa HOM05D013417 ORTHO05D022618 3.5e-16 90.5 360 27.5
FvH4_7g31260 Fragaria vesca HOM05D010677 ORTHO05D012678 6.0e-16 89.7 198 32.3
FAN10G0863 Fragaria x ananassa HOM05D008398 ORTHO05D005682 7.8e-16 89.4 264 28.8
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 7.8e-16 89.4 258 29.8
RcHm_v2.0_Chr1g0337131 Rosa chinensis HOM05D006732 ORTHO05D012678 1.3e-15 88.6 224 32.1
FAN06G0523 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.0e-15 87.4 305 26.9
FAN15G2539 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.0e-15 87.4 327 26.6
FvH4_7g30470 Fragaria vesca HOM05D008398 ORTHO05D046348 8.6e-15 85.9 301 26.2
FAN12G0204 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.6e-15 85.9 106 43.4
FAN06G2579 Fragaria x ananassa HOM05D008398 ORTHO05D029494 1.5e-14 85.1 331 26.3
FvH4_1g04910 Fragaria vesca HOM05D006732 ORTHO05D046085 2.5e-14 84.3 55 72.7
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 5.6e-14 83.2 195 36.4
FvH4_7g12650 Fragaria vesca HOM05D008398 ORTHO05D029494 5.6e-14 83.2 331 26.0
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 5.6e-14 83.2 212 30.7
FAN10G3231 Fragaria x ananassa HOM05D000122 ORTHO05D000139 5.6e-14 83.2 266 28.2
FAN19G2861 Fragaria x ananassa HOM05D006732 ORTHO05D046085 5.6e-14 83.2 52 76.9
FAN01G2094 Fragaria x ananassa HOM05D008398 ORTHO05D029494 7.3e-14 82.8 274 28.5
FAN06G0070 Fragaria x ananassa HOM05D008398 ORTHO05D029494 2.1e-13 81.3 331 25.7
FAN15G3012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 2.8e-13 80.9 287 28.6
FAN19G0291 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.7e-13 80.1 190 34.7
FvH4_4g12220 Fragaria vesca HOM05D013417 ORTHO05D022618 1.1e-12 79.0 311 28.9
FAN19G1354 Fragaria x ananassa HOM05D006732 ORTHO05D035266 1.1e-12 79.0 201 33.3
FvH4_2g38420 Fragaria vesca HOM05D013417 ORTHO05D022618 1.4e-12 78.6 324 27.8
FAN10G3802 Fragaria x ananassa HOM05D008398 ORTHO05D035411 3.1e-12 77.4 249 27.3
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 5.2e-12 76.6 278 27.7
FAN03G0822 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.5e-11 75.1 169 31.4
FvH4_1g04991 Fragaria vesca HOM05D006732 ORTHO05D005682 2.0e-11 74.7 167 37.7
FAN05G1573 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.0e-11 74.7 208 32.7
FAN12G2017 Fragaria x ananassa HOM05D013417 ORTHO05D022618 2.0e-11 74.7 303 28.7
FAN18G2036 Fragaria x ananassa HOM05D013417 ORTHO05D005682 3.4e-11 73.9 272 27.9
FvH4_4g06202 Fragaria vesca HOM05D006732 ORTHO05D005682 5.8e-11 73.2 61 47.5
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 5.8e-11 73.2 136 34.6
FvH4_7g31310 Fragaria vesca HOM05D000122 ORTHO05D012678 9.9e-11 72.4 138 31.2
FAN23G1373 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-10 71.6 48 64.6
FAN01G1167 Fragaria x ananassa HOM05D000122 ORTHO05D000139 2.2e-10 71.2 130 29.2
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 4.9e-10 70.1 217 30.0
FvH4_1g04520 Fragaria vesca HOM05D006732 ORTHO05D005682 8.4e-10 69.3 82 42.7
FAN12G2010 Fragaria x ananassa HOM05D013417 ORTHO05D022618 1.1e-09 68.9 305 28.5
FAN06G5012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.9e-09 68.2 289 24.9
Lj5C264T6 Lonicera japonica HOM05D012292 ORTHO05D012234 2.1e-08 64.7 296 26.7
FAN06G3455 Fragaria x ananassa HOM05D010677 ORTHO05D012678 2.7e-08 64.3 310 24.2
Thecc.03G305700 Theobroma cacao HOM05D017991 ORTHO05D020493 4.6e-08 63.5 218 26.1
Dinv24224 Davidia involucrata HOM05D015193 ORTHO05D005682 6.0e-08 63.2 203 27.6
COL.COLO4_29430 Corchorus olitorius HOM05D035412 ORTHO05D019051 5.1e-07 60.1 199 27.6
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 1.5e-06 58.5 164 28.7
Thecc.06G007100 Theobroma cacao HOM05D038973 ORTHO05D051440 1.5e-06 58.5 208 26.0
Cc06_g12930 Coffea canephora HOM05D015193 ORTHO05D005682 1.9e-06 58.2 183 29.5
FAN12G2497 Fragaria x ananassa HOM05D013417 ORTHO05D005682 2.5e-06 57.8 162 29.6
FAN06G3593 Fragaria x ananassa HOM05D000122 ORTHO05D012678 3.3e-06 57.4 138 27.5
FAN06G4197 Fragaria x ananassa HOM05D000122 ORTHO05D012678 3.3e-06 57.4 138 27.5
FAN12G0321 Fragaria x ananassa HOM05D013417 ORTHO05D005682 4.3e-06 57.0 162 29.6
TWI79G1583 Tripterygium wilfordii HOM05D022892 ORTHO05D014676 5.6e-06 56.6 127 35.4
FvH4_7g28941 Fragaria vesca HOM05D006732 ORTHO05D005682 7.3e-06 56.2 95 40.0


User provided reference genes

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