Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G0481 Fragaria x ananassa HOM05D002328 ORTHO05D002433 1.2e-101 373.2 190 100.0
FvH4_5g30050 Fragaria vesca HOM05D002328 ORTHO05D002433 4.7e-71 271.6 142 96.5
FAN13G1531 Fragaria x ananassa HOM05D002328 ORTHO05D002433 1.4e-67 260.0 136 96.3
FAN04G0476 Fragaria x ananassa HOM05D002328 ORTHO05D002433 3.1e-62 242.3 136 91.9
RcHm_v2.0_Chr7g0224241 Rosa chinensis HOM05D002328 ORTHO05D002433 2.8e-55 219.2 142 79.6
Prupe.1G207400 Prunus persica HOM05D002328 ORTHO05D002433 1.2e-50 203.8 142 72.5
Haze_01357 Corylus avellana HOM05D002328 ORTHO05D002433 2.0e-29 133.3 143 53.1
Cfa015270 Carpinus fangiana HOM05D002328 ORTHO05D002433 2.9e-28 129.4 142 52.1
Duzib212G0177 Durio zibethinus HOM05D002328 ORTHO05D002433 5.9e-21 105.1 142 44.4
CANSAT56G1496 Cannabis sativa HOM05D002328 ORTHO05D002433 7.7e-21 104.8 143 46.2
CiPaw.01G170300 Carya illinoinensis HOM05D002328 ORTHO05D002433 1.7e-20 103.6 142 45.1
Potri.013G127100 Populus trichocarpa HOM05D002328 ORTHO05D002433 1.7e-20 103.6 142 45.1
Sabra13G0106100 Salix brachista HOM05D002328 ORTHO05D002433 1.7e-20 103.6 141 43.3
Atru.chr4.1423 Acer truncatum HOM05D002328 ORTHO05D002433 5.5e-19 98.6 142 43.7
Thecc.04G165400 Theobroma cacao HOM05D002328 ORTHO05D002433 5.5e-19 98.6 142 40.8
QL10p055924 Quercus lobata HOM05D002328 ORTHO05D002433 9.4e-19 97.8 142 44.4
COL.COLO4_04394 Corchorus olitorius HOM05D002328 ORTHO05D002433 1.6e-18 97.1 142 46.5
Manes.04G035100 Manihot esculenta HOM05D002328 ORTHO05D002433 2.7e-18 96.3 142 47.9
Nn7g36814 Nelumbo nucifera HOM05D002328 ORTHO05D002433 1.4e-17 94.0 142 42.3
Nn7g36180 Nelumbo nucifera HOM05D002328 ORTHO05D002433 1.8e-17 93.6 133 42.1
Duzib151G0293 Durio zibethinus HOM05D002328 ORTHO05D002433 8.8e-17 91.3 135 41.5
Cpa.g.sc9.369 Carica papaya HOM05D002328 ORTHO05D002433 9.7e-16 87.8 141 41.1
Dinv33207 Davidia involucrata HOM05D002328 ORTHO05D002433 1.3e-15 87.4 142 40.8
MD17G1177900 Malus domestica HOM05D002328 ORTHO05D002433 1.7e-15 87.0 149 43.0
TWI38G1803 Tripterygium wilfordii HOM05D002328 ORTHO05D002433 6.9e-14 81.6 134 42.5
MD04G1049200 Malus domestica HOM05D002328 ORTHO05D002433 9.1e-14 81.3 148 43.2
GSVIVG01038145001 Vitis vinifera HOM05D002328 ORTHO05D002433 9.1e-14 81.3 89 53.9
Peaxi162Scf00483g00067 Petunia axillaris HOM05D002328 ORTHO05D002433 3.4e-13 79.3 142 38.7
TAR633G2789 Trochodendron aralioides HOM05D002328 ORTHO05D002433 3.4e-13 79.3 113 44.2
Hma1.2p1_0108F.1_g051740 Hydrangea macrophylla HOM05D002328 ORTHO05D002433 1.3e-12 77.4 109 42.2
PGR042G1105 Punica granatum HOM05D002328 ORTHO05D002433 1.7e-12 77.0 99 43.4
arahy.Tifrunner.gnm1.ann1.L505QV Arachis hypogaea HOM05D002328 ORTHO05D002433 8.5e-12 74.7 92 48.9
Lalb_Chr16g0384411 Lupinus albus HOM05D002328 ORTHO05D002433 8.5e-12 74.7 100 43.0
Nitab4.5_0000474g0080 Nicotiana tabacum HOM05D002328 ORTHO05D002433 1.1e-11 74.3 141 39.0
Gorai.011G135500 Gossypium raimondii HOM05D002328 ORTHO05D002433 2.5e-11 73.2 142 37.3
arahy.Tifrunner.gnm1.ann1.K6L3AX Arachis hypogaea HOM05D002328 ORTHO05D002433 3.2e-11 72.8 92 47.8
CAN.G316.13 Capsicum annuum HOM05D002328 ORTHO05D002433 3.2e-11 72.8 141 36.2
Ciclev10019728m.g Citrus clementina HOM05D002328 ORTHO05D002433 4.2e-11 72.4 134 38.8
Sabra19G0108200 Salix brachista HOM05D002328 ORTHO05D002433 7.2e-11 71.6 66 60.6
Gohir.A10G144000 Gossypium hirsutum HOM05D002328 ORTHO05D002433 3.6e-10 69.3 90 47.8
Nitab4.5_0000793g0010 Nicotiana tabacum HOM05D002328 ORTHO05D002433 3.6e-10 69.3 144 38.2
PSO339G2753 Papaver somniferum HOM05D002328 ORTHO05D002433 3.6e-10 69.3 142 37.3
Eucgr.L00004 Eucalyptus grandis HOM05D002328 ORTHO05D002433 4.7e-10 68.9 81 50.6
PSO384G5057 Papaver somniferum HOM05D002328 ORTHO05D002433 6.1e-10 68.6 142 36.6
Lalb_Chr05g0218891 Lupinus albus HOM05D002328 ORTHO05D002433 7.9e-10 68.2 100 41.0
Ah.13g073450 Amaranthus hybridus HOM05D002328 ORTHO05D002433 1.8e-09 67.0 94 44.7
Gohir.D10G123000 Gossypium hirsutum HOM05D002328 ORTHO05D002433 1.8e-09 67.0 74 51.4
Rhsim09G0009700 Rhododendron simsii HOM05D002328 ORTHO05D002433 3.0e-09 66.2 142 38.0
AUR62002399 Chenopodium quinoa HOM05D002328 ORTHO05D002433 6.7e-09 65.1 106 38.7
ClCG07G015140 Citrullus lanatus HOM05D002328 ORTHO05D002433 6.7e-09 65.1 77 50.6
Ciclev10027327m.g Citrus clementina HOM05D002328 ORTHO05D002433 6.7e-09 65.1 103 39.8
Cc03_g14160 Coffea canephora HOM05D002328 ORTHO05D002433 6.7e-09 65.1 74 54.1
Lj6A211T19 Lonicera japonica HOM05D002328 ORTHO05D002433 6.7e-09 65.1 70 54.3
Lj6A222T13 Lonicera japonica HOM05D002328 ORTHO05D002433 6.7e-09 65.1 70 54.3
EL10Ac3g06095 Beta vulgaris HOM05D002328 ORTHO05D002433 8.8e-09 64.7 125 37.6
AUR62023788 Chenopodium quinoa HOM05D002328 ORTHO05D002433 8.8e-09 64.7 97 41.2
MELO3C017769.2 Cucumis melo HOM05D002328 ORTHO05D002433 8.8e-09 64.7 74 51.4
Migut.N03064 Erythranthe guttata HOM05D002328 ORTHO05D002433 8.8e-09 64.7 97 43.3
Medtr4g087360 Medicago truncatula HOM05D002328 ORTHO05D002433 8.8e-09 64.7 93 44.1
Solyc03g062900.3 Solanum lycopersicum HOM05D002328 ORTHO05D002433 1.5e-08 63.9 142 35.9
Sc07g0007150 Simmondsia chinensis HOM05D002328 ORTHO05D002433 2.0e-08 63.5 96 44.8
VMungo0251G0850 Vigna mungo HOM05D002328 ORTHO05D002433 3.3e-08 62.8 99 43.4
SalBow6G1888 Salvia bowleyana HOM05D002328 ORTHO05D002433 4.4e-08 62.4 79 48.1
vmacro00694 Vaccinium macrocarpon HOM05D002328 ORTHO05D002433 9.7e-08 61.2 142 35.2
CsaV3_4G002710 Cucumis sativus L. HOM05D002328 ORTHO05D002433 1.3e-07 60.8 77 48.1
Oeu050333.1 Olea europaea HOM05D002328 ORTHO05D002433 1.3e-07 60.8 74 48.6
Phvul.003G296900 Phaseolus vulgaris HOM05D002328 ORTHO05D002433 1.3e-07 60.8 99 42.4
Potri.007G051100 Populus trichocarpa HOM05D002328 ORTHO05D002433 1.7e-07 60.5 133 37.6
SGA_v2.0_scaffold19G08846 Striga asiatica HOM05D002328 ORTHO05D002433 1.7e-07 60.5 90 42.2
Ca_18636_v3 Cicer arietinum L. HOM05D002328 ORTHO05D002433 2.2e-07 60.1 68 52.9
Actinidia27114 Actinidia chinensis HOM05D002328 ORTHO05D002433 6.3e-07 58.5 99 40.4
Sopen03g015180 Solanum pennellii HOM05D002328 ORTHO05D002433 6.3e-07 58.5 143 35.7
Manes.12G109700 Manihot esculenta HOM05D002328 ORTHO05D002433 8.2e-07 58.2 129 37.2
Sabra05G0115600 Salix brachista HOM05D002328 ORTHO05D002433 8.2e-07 58.2 107 37.4
Atru.chr11.1691 Acer truncatum HOM05D002328 ORTHO05D002433 1.4e-06 57.4 93 39.8
Oeu015717.1 Olea europaea HOM05D002328 ORTHO05D002433 1.4e-06 57.4 74 48.6
Hund03204 Selenicereus undatus HOM05D002328 ORTHO05D002433 1.4e-06 57.4 116 37.9
Glyma.02G137800 Glycine max HOM05D002328 ORTHO05D002433 2.4e-06 56.6 66 50.0
TPR.G23547 Trifolium pratense HOM05D002328 ORTHO05D009019 3.1e-06 56.2 73 49.3
BcaB02g07453 Brassica carinata HOM05D002328 ORTHO05D002433 4.1e-06 55.8 123 39.0
Potri.005G144800 Populus trichocarpa HOM05D002328 ORTHO05D002433 4.1e-06 55.8 107 38.3
Dinv43629 Davidia involucrata HOM05D002328 ORTHO05D002433 5.3e-06 55.5 132 31.1
THA.LOC104804014 Tarenaya hassleriana HOM05D002328 ORTHO05D002433 5.3e-06 55.5 141 34.0
CSS0046222 Camellia sinensis var. sinensis HOM05D002328 ORTHO05D002433 7.0e-06 55.1 101 37.6
DCAR_027522 Daucus carota HOM05D002328 ORTHO05D002433 9.1e-06 54.7 134 34.3
QL04p030673 Quercus lobata HOM05D002328 ORTHO05D002433 9.1e-06 54.7 147 32.0
PGSC0003DMG400008716 Solanum tuberosum HOM05D002328 ORTHO05D002433 9.1e-06 54.7 55 54.5


User provided reference genes

Program Settings