Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 7.9e-124 447.2 240 100.0
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 7.9e-124 447.2 240 100.0
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 9.1e-120 433.7 240 97.1
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.9e-118 428.7 249 93.6
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 7.5e-106 387.5 240 87.9
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.4e-104 383.3 240 82.9
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 7.7e-103 377.5 204 100.0
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 1.5e-101 373.2 237 82.3
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 3.8e-94 348.6 239 77.0
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 1.1e-93 347.1 244 76.6
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 9.5e-93 344.0 241 76.8
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 9.5e-93 344.0 242 75.6
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 3.6e-92 342.0 241 76.3
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 1.8e-91 339.7 242 76.0
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 2.6e-90 335.9 241 75.1
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 3.7e-89 332.0 242 73.6
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 8.3e-89 330.9 243 73.7
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 1.1e-88 330.5 244 73.0
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 1.2e-87 327.0 243 72.4
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 4.6e-87 325.1 242 72.7
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 5.9e-87 324.7 242 71.1
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 6.6e-86 321.2 240 71.2
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 8.6e-86 320.9 241 70.5
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 1.1e-85 320.5 241 71.0
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 1.5e-85 320.1 236 74.2
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 1.5e-85 320.1 244 71.7
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 1.9e-85 319.7 241 73.0
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 5.6e-85 318.2 243 71.6
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 7.3e-85 317.8 240 70.0
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 1.2e-84 317.0 237 72.2
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 2.1e-84 316.2 241 71.4
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 4.7e-84 315.1 241 71.4
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 6.2e-84 314.7 220 74.5
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 6.2e-84 314.7 243 71.2
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 8.0e-84 314.3 243 70.0
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 1.0e-83 313.9 242 68.2
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 1.8e-83 313.2 241 68.5
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 1.8e-83 313.2 245 69.4
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 2.3e-83 312.8 241 70.5
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 4.0e-83 312.0 225 70.2
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 4.0e-83 312.0 240 70.0
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 5.2e-83 311.6 237 68.8
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 6.8e-83 311.2 240 69.2
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 4.4e-82 308.5 225 70.7
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 9.8e-82 307.4 229 71.2
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 8.3e-81 304.3 241 65.6
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 1.4e-80 303.5 240 67.9
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 4.1e-80 302.0 246 65.9
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 5.4e-80 301.6 246 67.9
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.6e-79 300.1 207 74.9
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 1.6e-79 300.1 207 75.4
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 1.6e-79 300.1 231 68.4
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 2.0e-79 299.7 219 72.6
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 2.7e-79 299.3 252 65.9
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 3.5e-79 298.9 246 65.4
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 3.5e-79 298.9 244 66.0
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 6.0e-79 298.1 207 74.4
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 6.0e-79 298.1 247 66.4
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 1.3e-78 297.0 247 66.0
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 5.0e-78 295.0 241 66.0
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 8.6e-78 294.3 241 66.0
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 8.6e-78 294.3 240 66.2
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 1.1e-77 293.9 241 66.4
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 1.5e-77 293.5 241 65.6
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 1.5e-77 293.5 241 66.4
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 3.3e-77 292.4 241 66.4
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 3.3e-77 292.4 241 66.0
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 3.3e-77 292.4 241 66.4
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 3.3e-77 292.4 241 66.4
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 3.3e-77 292.4 241 65.6
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 3.3e-77 292.4 206 72.3
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 4.3e-77 292.0 242 64.5
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 5.6e-77 291.6 242 64.5
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 7.3e-77 291.2 238 65.1
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 9.5e-77 290.8 207 72.5
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 2.1e-76 289.7 241 66.0
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 2.1e-76 289.7 242 65.7
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 3.6e-76 288.9 241 67.2
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 3.6e-76 288.9 243 63.8
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 8.1e-76 287.7 239 66.1
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.4e-75 287.0 241 67.2
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 6.8e-75 284.6 247 62.8
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 1.2e-74 283.9 222 66.2
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 1.2e-74 283.9 243 63.4
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 2.9e-73 279.3 227 67.4
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.9e-72 276.6 237 65.0
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.4e-72 276.2 233 65.7
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 7.1e-72 274.6 221 65.2
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 3.5e-71 272.3 235 63.4
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 6.0e-71 271.6 250 60.0
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 1.7e-70 270.0 242 59.1
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 4.9e-65 251.9 231 58.0
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 4.6e-63 245.4 172 75.0
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 3.9e-62 242.3 190 68.4
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 5.6e-61 238.4 220 58.2
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 1.1e-59 234.2 209 59.8
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 2.4e-59 233.0 248 56.0
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 8.9e-59 231.1 216 56.9
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 2.4e-56 223.0 213 54.9
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 3.4e-50 202.6 227 48.9
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 9.9e-42 174.5 240 48.8
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 1.1e-40 171.0 227 46.3
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 1.0e-38 164.5 183 55.2
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 5.3e-35 152.1 99 80.8
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 2.0e-34 150.2 119 66.4
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 2.5e-29 133.3 247 39.3
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 2.4e-27 126.7 117 63.2
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 2.5e-24 116.7 79 78.5
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 2.6e-18 96.7 207 31.9
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 2.2e-12 77.0 156 31.4
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 3.1e-11 73.2 56 66.1
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 6.9e-11 72.0 52 71.2
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 1.6e-07 60.8 46 71.7


User provided reference genes

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