Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G0336 Fragaria x ananassa HOM05D005716 ORTHO05D044022 3.1e-37 157.9 78 100.0
FAN17G1884 Fragaria x ananassa HOM05D005716 ORTHO05D007885 3.2e-34 147.9 78 93.6
FAN25G2810 Fragaria x ananassa HOM05D005716 ORTHO05D007885 5.5e-34 147.1 78 93.6
FvH4_3g05780 Fragaria vesca HOM05D005716 ORTHO05D007885 1.2e-33 146.0 76 94.7
FAN11G1575 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.2e-33 146.0 76 94.7
FAN16G2159 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.2e-33 146.0 76 94.7
FAN21G0047 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.2e-33 146.0 76 94.7
FAN23G0273 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.2e-33 146.0 78 92.3
Lalb_Chr07g0188621 Lupinus albus HOM05D005716 ORTHO05D007885 2.7e-33 144.8 76 93.4
RcHm_v2.0_Chr5g0013741 Rosa chinensis HOM05D005716 ORTHO05D007885 2.7e-33 144.8 76 93.4
RcHm_v2.0_Chr5g0013751 Rosa chinensis HOM05D005716 ORTHO05D007885 2.7e-33 144.8 76 93.4
Ca_18267_v3 Cicer arietinum L. HOM05D005716 ORTHO05D007885 3.6e-33 144.4 76 92.1
TAR627G0480 Trochodendron aralioides HOM05D005716 ORTHO05D007885 3.6e-33 144.4 76 92.1
CDE02G4127 Ceratophyllum demersum HOM05D005716 ORTHO05D007885 6.1e-33 143.7 76 93.4
MELO3C002721.2 Cucumis melo HOM05D005716 ORTHO05D007885 6.1e-33 143.7 76 92.1
ECA232G4567 Erigeron canadensis HOM05D005716 ORTHO05D007885 6.1e-33 143.7 76 93.4
HanXRQChr08g0230021 Helianthus annuus HOM05D005716 ORTHO05D007885 6.1e-33 143.7 76 93.4
MD05G1285700 Malus domestica HOM05D005716 ORTHO05D007885 6.1e-33 143.7 76 93.4
Manes.17G068800 Manihot esculenta HOM05D005716 ORTHO05D007885 6.1e-33 143.7 76 93.4
Prupe.4G079000 Prunus persica HOM05D005716 ORTHO05D007885 6.1e-33 143.7 76 93.4
Sc05g0006370 Simmondsia chinensis HOM05D005716 ORTHO05D007885 6.1e-33 143.7 76 93.4
TWI09G0986 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 6.1e-33 143.7 76 93.4
Ciclev10016173m.g Citrus clementina HOM05D005716 ORTHO05D007885 8.0e-33 143.3 76 90.8
Lsat_1_v5_gn_1_96721 Lactuca sativa HOM05D005716 ORTHO05D007885 8.0e-33 143.3 76 92.1
TPR.G4903 Trifolium pratense HOM05D005716 ORTHO05D007885 8.0e-33 143.3 76 90.8
Dinv32271 Davidia involucrata HOM05D005716 ORTHO05D007885 1.0e-32 142.9 76 93.4
Medtr4g096770 Medicago truncatula HOM05D005716 ORTHO05D007885 1.0e-32 142.9 76 90.8
Nn3g20701 Nelumbo nucifera HOM05D005716 ORTHO05D007885 1.0e-32 142.9 76 92.1
PSO017G0333 Papaver somniferum HOM05D005716 ORTHO05D007885 1.0e-32 142.9 76 92.1
PSO017G6742 Papaver somniferum HOM05D005716 ORTHO05D007885 1.0e-32 142.9 76 92.1
SMO353G0068 Selaginella moellendorffii HOM05D005716 ORTHO05D007885 1.0e-32 142.9 76 92.1
ClCG03G007040 Citrullus lanatus HOM05D005716 ORTHO05D007885 1.4e-32 142.5 76 92.1
CsaV3_1G032590 Cucumis sativus L. HOM05D005716 ORTHO05D007885 1.4e-32 142.5 76 92.1
Nitab4.5_0001655g0090 Nicotiana tabacum HOM05D005716 ORTHO05D007885 1.4e-32 142.5 76 92.1
Nitab4.5_0005219g0060 Nicotiana tabacum HOM05D005716 ORTHO05D007885 1.4e-32 142.5 76 92.1
THA.LOC104812667 Tarenaya hassleriana HOM05D005716 ORTHO05D007885 1.4e-32 142.5 76 92.1
TWI53G0431 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 1.4e-32 142.5 76 92.1
Aqoxy4G00105 Aquilegia oxysepala HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 92.1
arahy.Tifrunner.gnm1.ann1.16PV68 Arachis hypogaea HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 90.8
arahy.Tifrunner.gnm1.ann1.MD42KV Arachis hypogaea HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 90.8
CiPaw.09G125500 Carya illinoinensis HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 92.1
COL.COLO4_31094 Corchorus olitorius HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 92.1
Haze_05577 Corylus avellana HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 92.1
DCAR_005122 Daucus carota HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 92.1
Eucgr.E02383 Eucalyptus grandis HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 92.1
Glyma.08G084800 Glycine max HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 90.8
Gohir.D10G040400 Gossypium hirsutum HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 92.1
Hma1.2p1_0286F.1_g114150 Hydrangea macrophylla HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 92.1
Peaxi162Scf00022g00310 Petunia axillaris HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 90.8
Potri.002G243500 Populus trichocarpa HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 92.1
Potri.002G243700 Populus trichocarpa HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 92.1
QL05p058825 Quercus lobata HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 92.1
QL05p058849 Quercus lobata HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 92.1
Sed0010647 Sechium edule HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 90.8
Thecc.06G152400 Theobroma cacao HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 92.1
TWI09G1196 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 92.1
VMungo0251G2847 Vigna mungo HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 90.8
GSVIVG01021429001 Vitis vinifera HOM05D005716 ORTHO05D007885 1.8e-32 142.1 76 90.8
Duzib235G0716 Durio zibethinus HOM05D005716 ORTHO05D007885 2.3e-32 141.7 76 90.8
Eucgr.E02408 Eucalyptus grandis HOM05D005716 ORTHO05D007885 2.3e-32 141.7 76 92.1
Lj1A1186G50 Lonicera japonica HOM05D005716 ORTHO05D007885 2.3e-32 141.7 76 90.8
Os05g0565200 Oryza sativa ssp. japonica HOM05D005716 ORTHO05D007885 2.3e-32 141.7 76 90.8
Phvul.002G193800 Phaseolus vulgaris HOM05D005716 ORTHO05D007885 2.3e-32 141.7 76 89.5
PGR042G3684 Punica granatum HOM05D005716 ORTHO05D007885 2.3e-32 141.7 76 92.1
SGA_v2.0_scaffold106G30642 Striga asiatica HOM05D005716 ORTHO05D007885 2.3e-32 141.7 76 90.8
Atru.chr10.1272 Acer truncatum HOM05D005716 ORTHO05D007885 3.0e-32 141.4 76 90.8
MSTRG.13250 Avicennia marina HOM05D005716 ORTHO05D007885 3.0e-32 141.4 76 89.5
EL10Ac8g19740 Beta vulgaris HOM05D005716 ORTHO05D007885 3.0e-32 141.4 76 92.1
AUR62027525 Chenopodium quinoa HOM05D005716 ORTHO05D007885 3.0e-32 141.4 76 92.1
Cc09_g09370 Coffea canephora HOM05D005716 ORTHO05D007885 3.0e-32 141.4 76 90.8
MBI07_g15285_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 3.0e-32 141.4 76 92.1
MBI07_g26370_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 3.0e-32 141.4 76 92.1
MD10G1263700 Malus domestica HOM05D005716 ORTHO05D007885 3.0e-32 141.4 76 92.1
Pp3c24_19130 Physcomitrium patens HOM05D005716 ORTHO05D007885 3.0e-32 141.4 76 89.5
Sabra02G0185400 Salix brachista HOM05D005716 ORTHO05D007885 3.0e-32 141.4 76 90.8
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 3.0e-32 141.4 76 92.1
Gorai.011G042600 Gossypium raimondii HOM05D005716 ORTHO05D007885 4.0e-32 141.0 76 90.8
PSO478G1410 Papaver somniferum HOM05D005716 ORTHO05D007885 4.0e-32 141.0 76 90.8
Psat7g090160 Pisum sativum HOM05D005716 ORTHO05D007885 4.0e-32 141.0 76 88.2
Zm00001eb343840 Zea mays HOM05D005716 ORTHO05D007885 4.0e-32 141.0 76 90.8
ATR0585G042 Amborella trichopoda HOM05D005716 ORTHO05D007885 5.2e-32 140.6 76 90.8
Migut.H01369 Erythranthe guttata HOM05D005716 ORTHO05D007885 5.2e-32 140.6 76 89.5
Oeu030916.2 Olea europaea HOM05D005716 ORTHO05D007885 5.2e-32 140.6 76 90.8
AL4G30440 Arabidopsis lyrata HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
BcaB06g28772 Brassica carinata HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
C04p39880 Brassica napus HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
C04p63810 Brassica napus HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
BolC4t27848H Brassica oleracea HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
BraA04t18144Z Brassica rapa HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
CANSAT80G0786 Cannabis sativa HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
Carub.0004s1614 Capsella rubella HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
CAN.G650.23 Capsicum annuum HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
Cpa.g.sc166.24 Carica papaya HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
Thhalv10017058m.g Eutrema salsugineum HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
Sp4g16740 Schrenkiella parvula HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
SEGI_04817 Sequoiadendron giganteum HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
Sopen02g019750 Solanum pennellii HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
PGSC0003DMG400008287 Solanum tuberosum HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
HPP92_010050 Vanilla planifolia HOM05D005716 ORTHO05D007885 6.8e-32 140.2 76 90.8
AagrBONN_evm.TU.Sc2ySwM_117.3588 Anthoceros agrestis HOM05D005716 ORTHO05D007885 8.8e-32 139.8 76 90.8
AUR62030223 Chenopodium quinoa HOM05D005716 ORTHO05D044022 8.8e-32 139.8 75 92.0
Mapoly0128s0016 Marchantia polymorpha HOM05D005716 ORTHO05D007885 1.2e-31 139.4 76 89.5
Aa31LG10G6910 Aethionema arabicum HOM05D005716 ORTHO05D007885 1.5e-31 139.0 76 89.5
AT2G34470 Arabidopsis thaliana HOM05D005716 ORTHO05D007885 1.5e-31 139.0 76 89.5
CARHR128550 Cardamine hirsuta HOM05D005716 ORTHO05D007885 1.5e-31 139.0 76 89.5
unitig_32.g11441 Utricularia gibba HOM05D005716 ORTHO05D007885 1.5e-31 139.0 76 89.5
Actinidia07685 Actinidia chinensis HOM05D005716 ORTHO05D007885 2.0e-31 138.7 76 90.8
Solyc02g070670.4 Solanum lycopersicum HOM05D005716 ORTHO05D007885 2.0e-31 138.7 76 89.5
SalBow7G1512 Salvia bowleyana HOM05D005716 ORTHO05D007885 2.6e-31 138.3 76 88.2
BolC4t25559H Brassica oleracea HOM05D005716 ORTHO05D007885 5.7e-31 137.1 76 89.5
CBR_g38955 Chara braunii HOM05D005716 ORTHO05D007885 7.5e-31 136.7 76 88.2
A04p06350 Brassica napus HOM05D005716 ORTHO05D007885 1.3e-30 136.0 76 88.2
BcaC02g09191 Brassica carinata HOM05D005716 ORTHO05D031863 1.7e-30 135.6 75 89.3
Rhsim07G0173200 Rhododendron simsii HOM05D005716 ORTHO05D007885 2.2e-30 135.2 87 81.6
BraA04t16339Z Brassica rapa HOM05D005716 ORTHO05D007885 2.8e-30 134.8 76 88.2
Hund21524 Selenicereus undatus HOM05D005716 ORTHO05D007885 4.1e-29 131.0 86 79.1
MCO04G141 Micromonas commoda HOM05D005716 ORTHO05D007885 1.9e-26 122.1 76 76.3
FAN02G1132 Fragaria x ananassa HOM05D005716 ORTHO05D007885 3.2e-26 121.3 112 61.6
PRCOL_00002216 Prasinoderma coloniale HOM05D005716 ORTHO05D007885 4.2e-26 120.9 76 76.3
CSS0037137 Camellia sinensis var. sinensis HOM05D005716 ORTHO05D007885 1.4e-21 105.9 70 78.6
RcHm_v2.0_Chr5g0013721 Rosa chinensis HOM05D005716 ORTHO05D007885 7.0e-21 103.6 76 71.1
RcHm_v2.0_Chr5g0013731 Rosa chinensis HOM05D005716 ORTHO05D007885 6.6e-19 97.1 76 68.4
Haze_26810 Corylus avellana HOM05D005716 ORTHO05D164461 2.1e-17 92.0 73 63.0
FAN02G0019 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.8e-17 91.7 78 65.4
Dinv30725 Davidia involucrata HOM05D005716 ORTHO05D007885 1.5e-15 85.9 76 63.2
arahy.Tifrunner.gnm1.ann1.8LN2Z6 Arachis hypogaea HOM05D005716 ORTHO05D087704 5.9e-12 73.9 41 87.8


User provided reference genes

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