Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G0196 Fragaria x ananassa HOM05D007712 ORTHO05D009755 3.7e-16 87.0 42 100.0
FAN04G1285 Fragaria x ananassa HOM05D007712 ORTHO05D009755 2.6e-14 80.9 42 92.9
Nn1g00955 Nelumbo nucifera HOM05D007712 ORTHO05D009755 4.3e-09 63.5 31 100.0
Gohir.D12G218700 Gossypium hirsutum HOM05D007712 ORTHO05D009755 2.1e-08 61.2 31 96.8
Gorai.008G234300 Gossypium raimondii HOM05D007712 ORTHO05D009755 2.1e-08 61.2 31 96.8
Prupe.5G067000 Prunus persica HOM05D007712 ORTHO05D009755 2.1e-08 61.2 31 96.8
EL10Ac5g12378 Beta vulgaris HOM05D007712 ORTHO05D009755 2.8e-08 60.8 40 75.0
Nn6g33914 Nelumbo nucifera HOM05D007712 ORTHO05D009755 2.8e-08 60.8 31 93.5
Thecc.03G249200 Theobroma cacao HOM05D007712 ORTHO05D009755 3.7e-08 60.5 31 93.5
MD04G1062500 Malus domestica HOM05D007712 ORTHO05D009755 4.8e-08 60.1 31 93.5
MD06G1056600 Malus domestica HOM05D007712 ORTHO05D009755 4.8e-08 60.1 31 93.5
Medtr4g100770 Medicago truncatula HOM05D007712 ORTHO05D009755 4.8e-08 60.1 31 93.5
RcHm_v2.0_Chr7g0203631 Rosa chinensis HOM05D007712 ORTHO05D009755 4.8e-08 60.1 31 93.5
VMungo0251G2826 Vigna mungo HOM05D007712 ORTHO05D009755 4.8e-08 60.1 35 85.7
BcaC06g33508 Brassica carinata HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
BcaNung00160 Brassica carinata HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
A01p20590 Brassica napus HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
C01p25890 Brassica napus HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
C07p48200 Brassica napus HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
BolC1t02534H Brassica oleracea HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
BolC7t45343H Brassica oleracea HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
BraA01t01987Z Brassica rapa HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
CSS0007152 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 6.2e-08 59.7 31 93.5
Cpa.g.sc29.177 Carica papaya HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
CiPaw.11G080700 Carya illinoinensis HOM05D007712 ORTHO05D009755 6.2e-08 59.7 31 93.5
COL.COLO4_37150 Corchorus olitorius HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
Duzib068G1393 Durio zibethinus HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
Duzib205G0100 Durio zibethinus HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
Glyma.05G061200 Glycine max HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
Glyma.17G143000 Glycine max HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
Gohir.A12G216100 Gossypium hirsutum HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
Hma1.2p1_0316F.1_g122970 Hydrangea macrophylla HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
Phvul.003G221800 Phaseolus vulgaris HOM05D007712 ORTHO05D009755 6.2e-08 59.7 29 100.0
TWI60G0592 Tripterygium wilfordii HOM05D007712 ORTHO05D009755 6.2e-08 59.7 31 93.5
Nitab4.5_0002289g0090 Nicotiana tabacum HOM05D007712 ORTHO05D009755 8.2e-08 59.3 41 70.7
AL7G38040 Arabidopsis lyrata HOM05D007712 ORTHO05D009755 1.1e-07 58.9 31 93.5
AT4G16695 Arabidopsis thaliana HOM05D007712 ORTHO05D009755 1.1e-07 58.9 31 93.5
CARHR223220 Cardamine hirsuta HOM05D007712 ORTHO05D009755 1.1e-07 58.9 31 93.5
Manes.02G041000 Manihot esculenta HOM05D007712 ORTHO05D009755 1.1e-07 58.9 31 93.5
PSO063G7306 Papaver somniferum HOM05D007712 ORTHO05D009755 1.1e-07 58.9 31 87.1
Sp7g15330 Schrenkiella parvula HOM05D007712 ORTHO05D009755 1.1e-07 58.9 31 93.5
Aa31LG2G12880 Aethionema arabicum HOM05D007712 ORTHO05D009755 1.4e-07 58.5 29 96.6
CSS0012443 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 1.4e-07 58.5 29 96.6
Ca_21974_v3 Cicer arietinum L. HOM05D007712 ORTHO05D009755 1.4e-07 58.5 29 96.6
Ciclev10023737m.g Citrus clementina HOM05D007712 ORTHO05D009755 1.4e-07 58.5 29 96.6
Haze_07896 Corylus avellana HOM05D007712 ORTHO05D009755 1.4e-07 58.5 29 96.6
Lj4g0003995 Lotus japonicus HOM05D007712 ORTHO05D009755 1.4e-07 58.5 31 90.3
Psat4g072600 Pisum sativum HOM05D007712 ORTHO05D009755 1.8e-07 58.2 31 90.3
PGR031G2779 Punica granatum HOM05D007712 ORTHO05D009755 1.8e-07 58.2 29 93.1
PSO782G1928 Papaver somniferum HOM05D007712 ORTHO05D009755 2.4e-07 57.8 29 93.1
Solyc08g078480.3 Solanum lycopersicum HOM05D007712 ORTHO05D009755 2.4e-07 57.8 31 90.3
PGSC0003DMG402004821 Solanum tuberosum HOM05D007712 ORTHO05D009755 2.4e-07 57.8 31 90.3
Carub.0007s2470 Capsella rubella HOM05D007712 ORTHO05D009755 3.1e-07 57.4 29 96.6
HanXRQChr16g0510951 Helianthus annuus HOM05D007712 ORTHO05D009755 3.1e-07 57.4 31 87.1
Lsat_1_v5_gn_6_18000 Lactuca sativa HOM05D007712 ORTHO05D009755 3.1e-07 57.4 31 87.1
DCAR_006839 Daucus carota HOM05D007712 ORTHO05D009755 4.0e-07 57.0 29 93.1
Potri.003G078100 Populus trichocarpa HOM05D007712 ORTHO05D009755 4.0e-07 57.0 29 96.6
ClCG01G004140 Citrullus lanatus HOM05D007712 ORTHO05D009755 5.3e-07 56.6 42 71.4
CANSAT21G0844 Cannabis sativa HOM05D007712 ORTHO05D009755 6.9e-07 56.2 29 93.1
Manes.01G082000 Manihot esculenta HOM05D007712 ORTHO05D009755 6.9e-07 56.2 29 93.1
ATR0317G046 Amborella trichopoda HOM05D007712 ORTHO05D009755 9.0e-07 55.8 29 86.2
DCAR_008500 Daucus carota HOM05D007712 ORTHO05D009755 1.2e-06 55.5 29 89.7
Nitab4.5_0001381g0130 Nicotiana tabacum HOM05D007712 ORTHO05D009755 1.5e-06 55.1 29 89.7
Pp3c5_22940 Physcomitrium patens HOM05D007712 ORTHO05D009755 1.5e-06 55.1 29 89.7
THA.LOC104815513 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 1.5e-06 55.1 31 87.1
TAR629G1768 Trochodendron aralioides HOM05D007712 ORTHO05D009755 1.5e-06 55.1 31 87.1
Duzib268G1849 Durio zibethinus HOM05D007712 ORTHO05D009755 2.0e-06 54.7 31 80.6
BraA08t33255Z Brassica rapa HOM05D007712 ORTHO05D009755 2.6e-06 54.3 27 96.3
HanXRQChr11g0345641 Helianthus annuus HOM05D007712 ORTHO05D009755 2.6e-06 54.3 29 86.2
HanXRQChr13g0400821 Helianthus annuus HOM05D007712 ORTHO05D009755 2.6e-06 54.3 29 86.2
Mapoly0033s0142 Marchantia polymorpha HOM05D007712 ORTHO05D009755 2.6e-06 54.3 29 89.7
CiPaw.12G051200 Carya illinoinensis HOM05D007712 ORTHO05D009755 4.5e-06 53.5 32 90.6
Migut.A01117 Erythranthe guttata HOM05D007712 ORTHO05D009755 5.8e-06 53.1 32 87.5
CAN.G1178.28 Capsicum annuum HOM05D007712 ORTHO05D009755 1.0e-05 52.4 29 86.2
Potri.001G156500 Populus trichocarpa HOM05D007712 ORTHO05D009755 1.0e-05 52.4 30 93.3
unitig_744.g24472 Utricularia gibba HOM05D007712 ORTHO05D009755 1.0e-05 52.4 29 82.8


User provided reference genes

Program Settings