Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.9e-46 188.7 90 100.0
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 2.3e-44 181.8 90 95.6
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 6.8e-44 180.3 94 94.7
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.7e-42 175.6 91 94.5
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 6.8e-36 153.7 96 82.3
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 1.5e-35 152.5 93 81.7
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 1.6e-32 142.5 93 73.1
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 3.5e-32 141.4 98 74.5
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 1.0e-31 139.8 101 71.3
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 1.0e-31 139.8 101 71.3
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 2.3e-31 138.7 100 69.0
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 3.0e-31 138.3 101 72.3
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 8.6e-31 136.7 97 74.2
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 1.1e-30 136.3 97 78.4
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 1.9e-30 135.6 94 72.3
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 3.3e-30 134.8 103 68.0
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 4.3e-30 134.4 103 68.9
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 9.5e-30 133.3 103 68.9
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 1.2e-29 132.9 103 67.0
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 1.6e-29 132.5 101 64.4
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 1.6e-29 132.5 103 68.0
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 1.6e-29 132.5 98 70.4
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 2.1e-29 132.1 98 68.4
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 2.8e-29 131.7 101 71.3
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 2.8e-29 131.7 103 67.0
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 2.8e-29 131.7 103 67.0
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 3.6e-29 131.3 101 71.3
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 4.7e-29 131.0 93 73.1
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 4.7e-29 131.0 103 66.0
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 4.7e-29 131.0 102 67.6
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 6.2e-29 130.6 105 64.8
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 6.2e-29 130.6 105 64.8
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 6.2e-29 130.6 96 69.8
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 8.1e-29 130.2 95 71.6
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 8.1e-29 130.2 95 71.6
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 1.1e-28 129.8 97 71.1
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.1e-28 129.8 95 71.6
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 1.1e-28 129.8 95 71.6
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 1.1e-28 129.8 103 68.0
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 1.4e-28 129.4 92 72.8
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 1.8e-28 129.0 94 69.1
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 1.8e-28 129.0 100 65.0
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 1.8e-28 129.0 99 65.7
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 2.3e-28 128.6 98 69.4
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 2.3e-28 128.6 103 66.0
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 3.1e-28 128.3 105 68.6
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 3.1e-28 128.3 98 70.4
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 4.0e-28 127.9 95 70.5
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 4.0e-28 127.9 98 65.3
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 6.8e-28 127.1 107 63.6
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 6.8e-28 127.1 107 63.6
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 6.8e-28 127.1 107 63.6
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 6.8e-28 127.1 94 70.2
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 8.9e-28 126.7 110 65.5
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 1.2e-27 126.3 108 63.9
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.5e-27 125.9 98 72.4
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 1.5e-27 125.9 107 66.4
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 2.0e-27 125.6 100 63.0
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 2.0e-27 125.6 111 62.2
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 2.6e-27 125.2 95 65.3
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 2.6e-27 125.2 95 65.3
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 2.6e-27 125.2 103 66.0
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 3.4e-27 124.8 98 71.4
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 3.4e-27 124.8 103 65.0
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 3.4e-27 124.8 103 66.0
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 3.4e-27 124.8 101 65.3
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 4.4e-27 124.4 103 65.0
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 4.4e-27 124.4 100 62.0
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 5.8e-27 124.0 95 68.4
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 7.5e-27 123.6 95 64.2
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 9.9e-27 123.2 101 64.4
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 1.7e-26 122.5 95 65.3
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 1.7e-26 122.5 95 65.3
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 2.2e-26 122.1 103 65.0
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 2.9e-26 121.7 100 61.0
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 2.9e-26 121.7 101 64.4
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 3.7e-26 121.3 95 64.2
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 6.4e-26 120.6 96 64.6
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 6.4e-26 120.6 96 64.6
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 6.4e-26 120.6 118 55.9
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 6.4e-26 120.6 100 66.0
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 1.1e-25 119.8 80 76.2
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 1.1e-25 119.8 94 63.8
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 1.1e-25 119.8 103 62.1
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 1.4e-25 119.4 99 60.6
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 1.4e-25 119.4 100 61.0
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 1.4e-25 119.4 100 61.0
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 1.4e-25 119.4 100 61.0
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 1.4e-25 119.4 99 68.7
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 1.4e-25 119.4 101 60.4
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 2.4e-25 118.6 99 65.7
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 2.4e-25 118.6 99 65.7
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 2.4e-25 118.6 103 65.0
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 3.2e-25 118.2 97 60.8
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 4.1e-25 117.9 105 61.9
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 4.1e-25 117.9 100 61.0
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 7.1e-25 117.1 95 66.3
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 2.1e-24 115.5 98 64.3
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 2.1e-24 115.5 72 80.6
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 4.6e-24 114.4 100 62.0
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 6.0e-24 114.0 103 63.1
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 7.8e-24 113.6 104 62.5
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 1.7e-23 112.5 105 61.9
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 3.0e-23 111.7 106 60.4
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 3.9e-23 111.3 73 78.1
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 8.6e-23 110.2 67 82.1
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 8.6e-23 110.2 103 59.2
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 8.6e-23 110.2 102 56.9
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 9.5e-22 106.7 83 62.7
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 1.6e-21 105.9 62 83.9
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 6.2e-21 104.0 106 55.7
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 8.1e-21 103.6 103 57.3
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 1.4e-20 102.8 62 79.0
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 5.2e-20 100.9 95 63.2
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 6.8e-20 100.5 91 58.2
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 7.6e-19 97.1 102 54.9
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 1.9e-17 92.4 91 57.1
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 1.0e-15 86.7 74 54.1
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 3.9e-15 84.7 72 58.3
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 3.3e-14 81.6 77 51.9
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 5.6e-14 80.9 55 67.3
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 5.6e-14 80.9 89 49.4
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 7.3e-14 80.5 55 72.7
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.4e-12 76.3 55 60.0
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 6.9e-12 73.9 54 68.5
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 1.1e-09 66.6 32 87.5
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 5.4e-09 64.3 71 52.1
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 7.1e-09 63.9 71 50.7
TPR.G6988 Trifolium pratense HOM05D006197 ORTHO05D007718 3.9e-07 58.2 61 55.7


User provided reference genes

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