Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G0081 Fragaria x ananassa HOM05D000187 ORTHO05D000926 2.4e-48 195.3 106 100.0
FAN28G0400 Fragaria x ananassa HOM05D000187 ORTHO05D000926 2.0e-18 95.9 52 90.4
FvH4_1g00010 Fragaria vesca HOM05D000187 ORTHO05D000926 7.5e-18 94.0 52 88.5
RcHm_v2.0_Chr2g0084221 Rosa chinensis HOM05D000187 ORTHO05D000926 2.4e-16 89.0 52 88.5
Prupe.7G271700 Prunus persica HOM05D000187 ORTHO05D000926 9.2e-16 87.0 55 80.0
MD00G1145000 Malus domestica HOM05D000187 ORTHO05D000926 3.0e-14 82.0 51 80.4
Atru.chr11.1136 Acer truncatum HOM05D000187 ORTHO05D000926 3.9e-14 81.6 51 78.4
MD15G1141500 Malus domestica HOM05D000187 ORTHO05D000926 1.1e-13 80.1 51 78.4
Manes.11G102000 Manihot esculenta HOM05D000187 ORTHO05D000926 1.9e-13 79.3 50 76.0
Cfa008758 Carpinus fangiana HOM05D000187 ORTHO05D000926 2.5e-13 79.0 51 76.5
CiPaw.05G170700 Carya illinoinensis HOM05D000187 ORTHO05D000926 2.5e-13 79.0 51 76.5
Haze_11773 Corylus avellana HOM05D000187 ORTHO05D000926 9.5e-13 77.0 50 76.0
Duzib132G0432 Durio zibethinus HOM05D000187 ORTHO05D000926 9.5e-13 77.0 51 76.5
Glyma.20G104300 Glycine max HOM05D000187 ORTHO05D000926 1.2e-12 76.6 51 72.5
Phvul.007G015800 Phaseolus vulgaris HOM05D000187 ORTHO05D000926 1.6e-12 76.3 51 72.5
CANSAT78G2433 Cannabis sativa HOM05D000187 ORTHO05D000926 2.8e-12 75.5 53 73.6
CSS0049850 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000926 4.7e-12 74.7 50 72.0
Dinv11728 Davidia involucrata HOM05D000187 ORTHO05D000926 6.2e-12 74.3 50 74.0
Ciclev10032094m.g Citrus clementina HOM05D000187 ORTHO05D000926 8.1e-12 73.9 51 74.5
Dinv17635 Davidia involucrata HOM05D000187 ORTHO05D000926 8.1e-12 73.9 49 75.5
arahy.Tifrunner.gnm1.ann1.21431W Arachis hypogaea HOM05D000187 ORTHO05D000926 1.1e-11 73.6 51 70.6
VMungo0720G1668 Vigna mungo HOM05D000187 ORTHO05D000926 1.1e-11 73.6 51 68.6
QL03p045866 Quercus lobata HOM05D000187 ORTHO05D000926 1.4e-11 73.2 53 71.7
TWI74G0652 Tripterygium wilfordii HOM05D000187 ORTHO05D000926 1.4e-11 73.2 51 68.6
Lj5g0016641 Lotus japonicus HOM05D000187 ORTHO05D000926 1.8e-11 72.8 51 70.6
ClCG02G014100 Citrullus lanatus HOM05D000187 ORTHO05D000926 2.3e-11 72.4 50 70.0
MELO3C011752.2 Cucumis melo HOM05D000187 ORTHO05D000926 3.1e-11 72.0 50 70.0
Psat6g233200 Pisum sativum HOM05D000187 ORTHO05D000926 3.1e-11 72.0 51 68.6
Glyma.10G284900 Glycine max HOM05D000187 ORTHO05D000926 4.0e-11 71.6 51 66.7
Thecc.02G157600 Theobroma cacao HOM05D000187 ORTHO05D000926 4.0e-11 71.6 51 68.6
GSVIVG01026184001 Vitis vinifera HOM05D000187 ORTHO05D000926 5.2e-11 71.2 51 68.6
TAR629G3309 Trochodendron aralioides HOM05D000187 ORTHO05D000926 6.8e-11 70.9 50 70.0
Actinidia13717 Actinidia chinensis HOM05D000187 ORTHO05D000926 8.9e-11 70.5 49 69.4
Gohir.A03G165500 Gossypium hirsutum HOM05D000187 ORTHO05D000926 8.9e-11 70.5 50 70.0
Duzib052G0316 Durio zibethinus HOM05D000187 ORTHO05D000926 1.2e-10 70.1 69 56.5
TPR.G4099 Trifolium pratense HOM05D000187 ORTHO05D000926 1.2e-10 70.1 51 64.7
MBI09_g00987_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000926 1.5e-10 69.7 50 68.0
arahy.Tifrunner.gnm1.ann1.4G0ENY Arachis hypogaea HOM05D000187 ORTHO05D000926 2.0e-10 69.3 47 74.5
CsaV3_5G006070 Cucumis sativus L. HOM05D000187 ORTHO05D000926 2.0e-10 69.3 50 68.0
TWI53G1725 Tripterygium wilfordii HOM05D000187 ORTHO05D000926 2.0e-10 69.3 51 66.7
Dinv17628 Davidia involucrata HOM05D000187 ORTHO05D000926 3.4e-10 68.6 53 67.9
TAR371G1270 Trochodendron aralioides HOM05D000187 ORTHO05D000926 3.4e-10 68.6 56 64.3
EL10Ac9g22972 Beta vulgaris HOM05D000187 ORTHO05D000926 5.8e-10 67.8 50 66.0
Gohir.D02G188700 Gossypium hirsutum HOM05D000187 ORTHO05D000926 5.8e-10 67.8 50 68.0
Gorai.005G211500 Gossypium raimondii HOM05D000187 ORTHO05D000926 5.8e-10 67.8 50 68.0
Hund08620 Selenicereus undatus HOM05D000187 ORTHO05D000926 7.6e-10 67.4 50 66.0
FAN25G2650 Fragaria x ananassa HOM05D000187 ORTHO05D000926 9.9e-10 67.0 58 65.5
Ca_11221_v3 Cicer arietinum L. HOM05D000187 ORTHO05D000926 1.3e-09 66.6 53 62.3
CSS0014041 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000926 2.2e-09 65.9 55 63.6
Nitab4.5_0004967g0020 Nicotiana tabacum HOM05D000187 ORTHO05D000926 2.2e-09 65.9 53 66.0
TAR371G0805 Trochodendron aralioides HOM05D000187 ORTHO05D000926 2.2e-09 65.9 56 62.5
Ah.01g012510 Amaranthus hybridus HOM05D000187 ORTHO05D000926 2.9e-09 65.5 50 66.0
Potri.007G073200 Populus trichocarpa HOM05D000187 ORTHO05D000926 3.8e-09 65.1 52 63.5
vmacro08835 Vaccinium macrocarpon HOM05D000187 ORTHO05D000926 3.8e-09 65.1 50 70.0
Hma1.2p1_0044F.1_g025990 Hydrangea macrophylla HOM05D000187 ORTHO05D000926 4.9e-09 64.7 53 62.3
Gohir.A01G012500 Gossypium hirsutum HOM05D000187 ORTHO05D000926 6.4e-09 64.3 52 67.3
Lalb_Chr06g0163871 Lupinus albus HOM05D000187 ORTHO05D000926 8.4e-09 63.9 57 57.9
Actinidia38419 Actinidia chinensis HOM05D000187 ORTHO05D000926 1.4e-08 63.2 54 63.0
Nitab4.5_0000661g0030 Nicotiana tabacum HOM05D000187 ORTHO05D000926 1.9e-08 62.8 52 63.5
Sopen02g002340 Solanum pennellii HOM05D000187 ORTHO05D000926 1.9e-08 62.8 53 62.3
CiPaw.06G061700 Carya illinoinensis HOM05D000187 ORTHO05D000926 2.4e-08 62.4 69 50.7
Cc11_g03510 Coffea canephora HOM05D000187 ORTHO05D000926 2.4e-08 62.4 53 60.4
Medtr1g114240 Medicago truncatula HOM05D000187 ORTHO05D000926 2.4e-08 62.4 57 57.9
Oeu006341.1 Olea europaea HOM05D000187 ORTHO05D000926 2.4e-08 62.4 55 65.5
Potri.005G090800 Populus trichocarpa HOM05D000187 ORTHO05D000926 2.4e-08 62.4 52 61.5
PGR044G2289 Punica granatum HOM05D000187 ORTHO05D000926 2.4e-08 62.4 57 57.9
Sed0017683 Sechium edule HOM05D000187 ORTHO05D000926 2.4e-08 62.4 52 65.4
Gohir.D01G013700 Gossypium hirsutum HOM05D000187 ORTHO05D000926 4.1e-08 61.6 52 65.4
Gorai.002G015500 Gossypium raimondii HOM05D000187 ORTHO05D000926 4.1e-08 61.6 52 65.4
HanXRQChr05g0139681 Helianthus annuus HOM05D000187 ORTHO05D000926 4.1e-08 61.6 54 59.3
Rhsim04G0130800 Rhododendron simsii HOM05D000187 ORTHO05D000926 4.1e-08 61.6 49 65.3
Sc06g0006750 Simmondsia chinensis HOM05D000187 ORTHO05D000926 4.1e-08 61.6 50 60.0
COL.COLO4_33056 Corchorus olitorius HOM05D000187 ORTHO05D000926 5.4e-08 61.2 45 68.9
Solyc02g005480.4 Solanum lycopersicum HOM05D000187 ORTHO05D000926 7.1e-08 60.8 52 61.5
Peaxi162Scf00334g00210 Petunia axillaris HOM05D000187 ORTHO05D000926 1.6e-07 59.7 43 67.4
Sabra07G0061700 Salix brachista HOM05D000187 ORTHO05D000926 2.1e-07 59.3 53 56.6
PGR044G0989 Punica granatum HOM05D000187 ORTHO05D000926 3.5e-07 58.5 57 56.1
Lsat_1_v5_gn_4_64601 Lactuca sativa HOM05D000187 ORTHO05D000926 4.6e-07 58.2 52 57.7
AUR62032960 Chenopodium quinoa HOM05D000187 ORTHO05D000926 6.0e-07 57.8 53 58.5
MSTRG.13682 Avicennia marina HOM05D000187 ORTHO05D000926 7.8e-07 57.4 61 52.5
SEGI_34519 Sequoiadendron giganteum HOM05D000187 ORTHO05D000926 7.8e-07 57.4 50 60.0
unitig_699.g19552 Utricularia gibba HOM05D000187 ORTHO05D000926 7.8e-07 57.4 45 66.7
Lj6C717T11 Lonicera japonica HOM05D000187 ORTHO05D000926 1.3e-06 56.6 56 57.1
unitig_27.g25280 Utricularia gibba HOM05D000187 ORTHO05D000926 1.3e-06 56.6 35 71.4
Cpa.g.sc1773.1 Carica papaya HOM05D000187 ORTHO05D000926 1.7e-06 56.2 35 74.3
CARHR095440 Cardamine hirsuta HOM05D000187 ORTHO05D000926 2.3e-06 55.8 50 60.0
CDE04G3378 Ceratophyllum demersum HOM05D000187 ORTHO05D000926 3.0e-06 55.5 50 56.0
Eucgr.G02582 Eucalyptus grandis HOM05D000187 ORTHO05D000926 3.0e-06 55.5 39 66.7
Oeu027919.1 Olea europaea HOM05D000187 ORTHO05D000926 3.0e-06 55.5 52 57.7
SGA_v2.0_scaffold256G45634 Striga asiatica HOM05D000187 ORTHO05D000926 3.0e-06 55.5 40 65.0
CDE02G0893 Ceratophyllum demersum HOM05D000187 ORTHO05D000926 3.9e-06 55.1 65 47.7
ECA234G0105 Erigeron canadensis HOM05D000187 ORTHO05D000926 3.9e-06 55.1 42 61.9
ATR0810G020 Amborella trichopoda HOM05D000187 ORTHO05D000926 6.6e-06 54.3 53 54.7
HPP92_025852 Vanilla planifolia HOM05D000187 ORTHO05D000926 6.6e-06 54.3 35 71.4
AL3G33470 Arabidopsis lyrata HOM05D000187 ORTHO05D000926 8.6e-06 53.9 50 56.0
Sed0013552 Sechium edule HOM05D000187 ORTHO05D000926 8.6e-06 53.9 40 65.0
Zm00001eb319790 Zea mays HOM05D000187 ORTHO05D000926 8.6e-06 53.9 53 54.7


User provided reference genes

Program Settings