Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G0008 Fragaria x ananassa HOM05D007324 ORTHO05D007884 1.7e-39 166.0 118 100.0
FvH4_5g21830 Fragaria vesca HOM05D007324 ORTHO05D007884 5.1e-39 164.5 118 91.5
FAN18G2652 Fragaria x ananassa HOM05D007324 ORTHO05D007884 4.3e-38 161.4 118 91.5
FAN04G2965 Fragaria x ananassa HOM05D007324 ORTHO05D007884 3.6e-37 158.3 118 92.4
FAN13G0501 Fragaria x ananassa HOM05D007324 ORTHO05D007884 3.5e-32 141.7 148 59.5
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 7.4e-14 80.9 87 59.8
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 3.1e-12 75.5 86 51.2
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 5.3e-12 74.7 89 52.8
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 6.9e-12 74.3 84 52.4
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 9.0e-12 73.9 87 50.6
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 9.0e-12 73.9 87 50.6
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 1.2e-11 73.6 87 47.1
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 1.5e-11 73.2 86 47.7
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 1.5e-11 73.2 85 61.2
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 2.0e-11 72.8 86 50.0
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 2.6e-11 72.4 86 60.5
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 2.6e-11 72.4 85 62.4
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 2.6e-11 72.4 87 47.1
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 3.4e-11 72.0 80 55.0
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 3.4e-11 72.0 94 47.9
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 4.5e-11 71.6 80 51.2
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 9.9e-11 70.5 77 50.6
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 1.3e-10 70.1 89 46.1
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 1.7e-10 69.7 87 47.1
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 2.2e-10 69.3 90 45.6
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 3.8e-10 68.6 79 50.6
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 3.8e-10 68.6 79 50.6
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 3.8e-10 68.6 90 44.4
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 3.8e-10 68.6 90 44.4
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 3.8e-10 68.6 86 50.0
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 3.8e-10 68.6 85 48.2
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 3.8e-10 68.6 91 46.2
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 3.8e-10 68.6 86 51.2
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 1.1e-09 67.0 74 55.4
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 1.9e-09 66.2 74 51.4
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 5.5e-09 64.7 70 48.6
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 7.1e-09 64.3 79 48.1
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 9.3e-09 63.9 87 46.0
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 1.6e-08 63.2 116 39.7
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 2.1e-08 62.8 91 45.1
CDE12G0317 Ceratophyllum demersum HOM05D007324 ORTHO05D007884 3.5e-08 62.0 114 35.1
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 4.6e-08 61.6 112 37.5
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 7.9e-08 60.8 87 47.1
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 7.9e-08 60.8 83 44.6
Lj4g0022663 Lotus japonicus HOM05D007324 ORTHO05D007884 7.9e-08 60.8 87 56.3
Prupe.5G039300 Prunus persica HOM05D007324 ORTHO05D007884 7.9e-08 60.8 106 39.6
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 7.9e-08 60.8 74 48.6
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 1.0e-07 60.5 85 43.5
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 1.0e-07 60.5 87 42.5
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 1.3e-07 60.1 88 39.8
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 1.8e-07 59.7 87 43.7
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 3.0e-07 58.9 79 49.4
BcaB07g32955 Brassica carinata HOM05D007324 ORTHO05D007884 6.7e-07 57.8 115 43.5
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 8.7e-07 57.4 91 42.9
TPR.G29033 Trifolium pratense HOM05D007324 ORTHO05D007884 1.9e-06 56.2 80 53.8
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 2.5e-06 55.8 79 43.0
C05p32030 Brassica napus HOM05D007324 ORTHO05D007884 4.3e-06 55.1 79 48.1
MELO3C032260.2 Cucumis melo HOM05D007324 ORTHO05D007884 4.3e-06 55.1 126 34.9
Ca_22071_v3 Cicer arietinum L. HOM05D007324 ORTHO05D007884 7.4e-06 54.3 75 53.3
Cpa.g.sc18.65 Carica papaya HOM05D007324 ORTHO05D007884 9.6e-06 53.9 64 50.0
Prupe.5G039400 Prunus persica HOM05D007324 ORTHO05D007884 9.6e-06 53.9 43 65.1


User provided reference genes

Program Settings