Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2872 Fragaria x ananassa HOM05D004309 ORTHO05D005588 3.5e-77 291.6 149 100.0
FvH4_4g18580 Fragaria vesca HOM05D004309 ORTHO05D005588 3.2e-75 285.0 144 100.0
RcHm_v2.0_Chr4g0423181 Rosa chinensis HOM05D004309 ORTHO05D005588 2.3e-73 278.9 144 96.5
ClCG05G006230 Citrullus lanatus HOM05D004309 ORTHO05D005588 7.2e-67 257.3 142 87.3
Dinv29733 Davidia involucrata HOM05D004309 ORTHO05D005588 9.5e-67 256.9 141 88.7
Sed0024380 Sechium edule HOM05D004309 ORTHO05D005588 1.2e-66 256.5 142 87.3
CsaV3_3G014840 Cucumis sativus L. HOM05D004309 ORTHO05D005588 4.7e-66 254.6 142 87.3
Lsat_1_v5_gn_3_24101 Lactuca sativa HOM05D004309 ORTHO05D005588 4.7e-66 254.6 141 87.9
Manes.03G198200 Manihot esculenta HOM05D004309 ORTHO05D005588 4.7e-66 254.6 141 88.7
Sabra10G0006000 Salix brachista HOM05D004309 ORTHO05D005588 1.4e-65 253.1 141 87.9
PGR031G0395 Punica granatum HOM05D004309 ORTHO05D005588 3.0e-65 251.9 141 87.2
Sed0001785 Sechium edule HOM05D004309 ORTHO05D005588 5.2e-65 251.1 142 84.5
Thecc.04G288300 Theobroma cacao HOM05D004309 ORTHO05D005588 6.8e-65 250.8 140 87.1
CSS0011476 Camellia sinensis var. sinensis HOM05D004309 ORTHO05D005588 8.9e-65 250.4 141 87.2
CANSAT78G0198 Cannabis sativa HOM05D004309 ORTHO05D005588 8.9e-65 250.4 140 89.3
Solyc01g066480.3 Solanum lycopersicum HOM05D004309 ORTHO05D005588 8.9e-65 250.4 140 87.1
Sopen01g028230 Solanum pennellii HOM05D004309 ORTHO05D005588 8.9e-65 250.4 140 87.1
CAN.G1639.2 Capsicum annuum HOM05D004309 ORTHO05D005588 1.5e-64 249.6 140 87.1
Nitab4.5_0000695g0040 Nicotiana tabacum HOM05D004309 ORTHO05D005588 2.0e-64 249.2 140 87.1
Actinidia00004 Actinidia chinensis HOM05D004309 ORTHO05D005588 2.6e-64 248.8 141 86.5
HanXRQChr06g0173801 Helianthus annuus HOM05D004309 ORTHO05D005588 2.6e-64 248.8 141 85.1
ECA246G0235 Erigeron canadensis HOM05D004309 ORTHO05D005588 3.4e-64 248.4 141 84.4
Prupe.1G125100 Prunus persica HOM05D004309 ORTHO05D005588 3.4e-64 248.4 141 87.9
Duzib212G0876 Durio zibethinus HOM05D004309 ORTHO05D005588 4.4e-64 248.1 140 85.7
Sc19g0005430 Simmondsia chinensis HOM05D004309 ORTHO05D005588 9.8e-64 246.9 141 84.4
THA.LOC104802581 Tarenaya hassleriana HOM05D004309 ORTHO05D005588 9.8e-64 246.9 144 83.3
Atru.chr4.2894 Acer truncatum HOM05D004309 ORTHO05D005588 1.7e-63 246.1 141 83.7
Lj3A823G59 Lonicera japonica HOM05D004309 ORTHO05D005588 1.7e-63 246.1 141 85.8
Nitab4.5_0006814g0040 Nicotiana tabacum HOM05D004309 ORTHO05D005588 1.7e-63 246.1 140 85.7
CiPaw.01G145800 Carya illinoinensis HOM05D004309 ORTHO05D005588 2.2e-63 245.7 141 85.8
Gorai.002G028600 Gossypium raimondii HOM05D004309 ORTHO05D005588 2.8e-63 245.4 140 85.0
Potri.010G011000 Populus trichocarpa HOM05D004309 ORTHO05D005588 2.8e-63 245.4 141 85.8
DCAR_023296 Daucus carota HOM05D004309 ORTHO05D005588 3.7e-63 245.0 141 84.4
SGA_v2.0_scaffold91G28010 Striga asiatica HOM05D004309 ORTHO05D005588 4.9e-63 244.6 141 83.7
Gohir.D01G023490 Gossypium hirsutum HOM05D004309 ORTHO05D005588 6.3e-63 244.2 140 84.3
Hma1.2p1_0078F.1_g040370 Hydrangea macrophylla HOM05D004309 ORTHO05D005588 8.3e-63 243.8 141 83.7
GSVIVG01035117001 Vitis vinifera HOM05D004309 ORTHO05D005588 1.1e-62 243.4 141 83.7
CDE11G0079 Ceratophyllum demersum HOM05D004309 ORTHO05D005588 1.4e-62 243.0 144 80.6
Oeu053993.1 Olea europaea HOM05D004309 ORTHO05D005588 1.4e-62 243.0 144 79.9
MELO3C006680.2 Cucumis melo HOM05D004309 ORTHO05D005588 2.4e-62 242.3 156 79.5
Gohir.A01G033033 Gossypium hirsutum HOM05D004309 ORTHO05D005588 2.4e-62 242.3 140 83.6
TAR633G1513 Trochodendron aralioides HOM05D004309 ORTHO05D005588 2.4e-62 242.3 141 82.3
A08p12070 Brassica napus HOM05D004309 ORTHO05D005588 3.1e-62 241.9 144 81.9
BraA08t33198Z Brassica rapa HOM05D004309 ORTHO05D005588 3.1e-62 241.9 144 81.9
Ciclev10005665m.g Citrus clementina HOM05D004309 ORTHO05D005588 4.1e-62 241.5 141 82.3
PSO170G6503 Papaver somniferum HOM05D004309 ORTHO05D005588 4.1e-62 241.5 141 82.3
PSO407G0025 Papaver somniferum HOM05D004309 ORTHO05D005588 4.1e-62 241.5 141 82.3
PSO444G0002 Papaver somniferum HOM05D004309 ORTHO05D005588 4.1e-62 241.5 141 82.3
ATR0150G025 Amborella trichopoda HOM05D004309 ORTHO05D005588 9.2e-62 240.4 143 79.0
Aqoxy2G02913 Aquilegia oxysepala HOM05D004309 ORTHO05D005588 9.2e-62 240.4 141 81.6
BcaC07g37940 Brassica carinata HOM05D004309 ORTHO05D005588 9.2e-62 240.4 144 81.2
BolC8t48324H Brassica oleracea HOM05D004309 ORTHO05D005588 9.2e-62 240.4 144 81.2
Cc03_g01580 Coffea canephora HOM05D004309 ORTHO05D005588 9.2e-62 240.4 141 83.0
Rhsim04G0225000 Rhododendron simsii HOM05D004309 ORTHO05D005588 2.0e-61 239.2 141 85.1
Sp7g14390 Schrenkiella parvula HOM05D004309 ORTHO05D005588 2.7e-61 238.8 144 79.9
DCAR_027056 Daucus carota HOM05D004309 ORTHO05D005588 3.5e-61 238.4 141 83.0
BcaB04g18344 Brassica carinata HOM05D004309 ORTHO05D005588 4.5e-61 238.0 144 79.9
Carub.0007s2572 Capsella rubella HOM05D004309 ORTHO05D005588 4.5e-61 238.0 144 79.9
QL06p010180 Quercus lobata HOM05D004309 ORTHO05D005588 4.5e-61 238.0 141 83.0
AL7G39330 Arabidopsis lyrata HOM05D004309 ORTHO05D005588 5.9e-61 237.7 144 79.2
AT4G15940 Arabidopsis thaliana HOM05D004309 ORTHO05D005588 5.9e-61 237.7 144 79.2
Thhalv10026185m.g Eutrema salsugineum HOM05D004309 ORTHO05D005588 7.8e-61 237.3 144 79.2
SalBow5G3240 Salvia bowleyana HOM05D004309 ORTHO05D005588 7.8e-61 237.3 141 80.9
Migut.N00082 Erythranthe guttata HOM05D004309 ORTHO05D005588 1.0e-60 236.9 141 80.1
vmacro08183 Vaccinium macrocarpon HOM05D004309 ORTHO05D005588 1.0e-60 236.9 141 84.4
CARHR290520 Cardamine hirsuta HOM05D004309 ORTHO05D005588 1.3e-60 236.5 144 78.5
arahy.Tifrunner.gnm1.ann1.9V15EM Arachis hypogaea HOM05D004309 ORTHO05D005588 1.7e-60 236.1 141 82.3
Eucgr.C01303 Eucalyptus grandis HOM05D004309 ORTHO05D005588 1.7e-60 236.1 141 82.3
TPR.G3211 Trifolium pratense HOM05D004309 ORTHO05D005588 1.7e-60 236.1 141 80.9
Lj4g0021722 Lotus japonicus HOM05D004309 ORTHO05D007726 2.3e-60 235.7 141 80.1
arahy.Tifrunner.gnm1.ann1.YC35GQ Arachis hypogaea HOM05D004309 ORTHO05D007726 2.9e-60 235.3 141 82.3
Cfa015422 Carpinus fangiana HOM05D004309 ORTHO05D005588 2.9e-60 235.3 140 85.0
unitig_749.g13387 Utricularia gibba HOM05D004309 ORTHO05D005588 2.9e-60 235.3 143 79.7
Hund24883 Selenicereus undatus HOM05D004309 ORTHO05D005588 3.8e-60 235.0 142 80.3
SEGI_31265 Sequoiadendron giganteum HOM05D004309 ORTHO05D005588 8.6e-60 233.8 143 80.4
HPP92_010682 Vanilla planifolia HOM05D004309 ORTHO05D005588 2.5e-59 232.3 143 79.0
Glyma.17G028100 Glycine max HOM05D004309 ORTHO05D005588 3.3e-59 231.9 141 80.1
Lalb_Chr07g0182331 Lupinus albus HOM05D004309 ORTHO05D005588 1.6e-58 229.6 140 80.0
Glyma.07G245900 Glycine max HOM05D004309 ORTHO05D005588 2.1e-58 229.2 141 78.7
Medtr4g120230 Medicago truncatula HOM05D004309 ORTHO05D005588 3.6e-58 228.4 141 78.7
Phvul.003G106800 Phaseolus vulgaris HOM05D004309 ORTHO05D005588 3.6e-58 228.4 141 78.0
Psat4g026320 Pisum sativum HOM05D004309 ORTHO05D005588 3.6e-58 228.4 141 77.3
VMungo1215G2421 Vigna mungo HOM05D004309 ORTHO05D005588 6.1e-58 227.6 143 76.2
MSTRG.24800 Avicennia marina HOM05D004309 ORTHO05D005588 1.8e-57 226.1 141 76.6
Thhalv10021471m.g Eutrema salsugineum HOM05D004309 ORTHO05D005588 8.9e-57 223.8 144 75.7
BcaB04g18345 Brassica carinata HOM05D004309 ORTHO05D005588 3.4e-56 221.9 142 78.2
Aa31LG8G3800 Aethionema arabicum HOM05D004309 ORTHO05D005588 4.4e-56 221.5 144 75.0
Carub.0003s1643 Capsella rubella HOM05D004309 ORTHO05D005588 5.7e-56 221.1 144 74.3
A08p12080 Brassica napus HOM05D004309 ORTHO05D005588 1.3e-55 219.9 141 77.3
BraA08t33199Z Brassica rapa HOM05D004309 ORTHO05D005588 1.3e-55 219.9 141 77.3
Sp3g14970 Schrenkiella parvula HOM05D004309 ORTHO05D005588 1.3e-55 219.9 144 74.3
Lj6A680G88 Lonicera japonica HOM05D004309 ORTHO05D005588 1.7e-55 219.5 124 86.3
AL3G29630 Arabidopsis lyrata HOM05D004309 ORTHO05D005588 2.2e-55 219.2 146 73.3
Zm00001eb063500 Zea mays HOM05D004309 ORTHO05D005588 2.2e-55 219.2 146 74.7
Cpa.g.sc50.169 Carica papaya HOM05D004309 ORTHO05D005588 8.3e-55 217.2 124 83.1
BcaC09g48622 Brassica carinata HOM05D004309 ORTHO05D005588 1.1e-54 216.9 144 72.9
C01p47650 Brassica napus HOM05D004309 ORTHO05D005588 1.1e-54 216.9 144 72.9
BolC1t04737H Brassica oleracea HOM05D004309 ORTHO05D005588 1.1e-54 216.9 144 72.9
A01p37620 Brassica napus HOM05D004309 ORTHO05D005588 1.8e-54 216.1 144 72.2
Zm00001eb053490 Zea mays HOM05D004309 ORTHO05D005588 2.4e-54 215.7 146 71.9
Os03g0829000 Oryza sativa ssp. japonica HOM05D004309 ORTHO05D005588 4.1e-54 214.9 146 72.6
BraA01t03822Z Brassica rapa HOM05D004309 ORTHO05D005588 9.2e-54 213.8 144 71.5
Peaxi162Scf00065g01425 Petunia axillaris HOM05D004309 ORTHO05D005588 1.2e-53 213.4 128 81.2
EL10Ac3g06636 Beta vulgaris HOM05D004309 ORTHO05D005588 2.7e-53 212.2 144 70.1
AagrBONN_evm.TU.Sc2ySwM_344.4111 Anthoceros agrestis HOM05D004309 ORTHO05D005588 3.5e-53 211.8 144 70.1
Aa31LG10G6200 Aethionema arabicum HOM05D004309 ORTHO05D005588 7.8e-53 210.7 192 59.9
AUR62018079 Chenopodium quinoa HOM05D004309 ORTHO05D005588 1.5e-51 206.5 142 69.0
CBR_g26355 Chara braunii HOM05D004309 ORTHO05D005588 1.6e-50 203.0 140 70.7
TWI09G0267 Tripterygium wilfordii HOM05D004309 ORTHO05D005588 2.8e-50 202.2 141 73.8
COL.COLO4_13828 Corchorus olitorius HOM05D005069 ORTHO05D006024 1.4e-49 199.9 112 85.7
Pp3c9_26130 Physcomitrium patens HOM05D004309 ORTHO05D005588 1.5e-48 196.4 144 63.2
Mapoly0093s0048 Marchantia polymorpha HOM05D004309 ORTHO05D005588 3.4e-48 195.3 144 66.0
Duzib151G0762 Durio zibethinus HOM05D004309 ORTHO05D005588 2.9e-47 192.2 149 66.4
AUR62001364 Chenopodium quinoa HOM05D004309 ORTHO05D005588 2.4e-46 189.1 142 66.2
AUR62025637 Chenopodium quinoa HOM05D004309 ORTHO05D005588 3.2e-46 188.7 142 66.2
Nn3g21534 Nelumbo nucifera HOM05D004309 ORTHO05D005588 9.2e-46 187.2 141 68.8
EL10Ac7g18188 Beta vulgaris HOM05D004309 ORTHO05D005588 1.2e-45 186.8 142 65.5
Ah.08g217630 Amaranthus hybridus HOM05D004309 ORTHO05D005588 5.0e-44 181.4 144 64.6
SMO347G0543 Selaginella moellendorffii HOM05D004309 ORTHO05D005588 2.3e-41 172.6 144 58.3
HPP92_010660 Vanilla planifolia HOM05D004309 ORTHO05D005588 8.9e-41 170.6 106 78.3
AT3G16700 Arabidopsis thaliana HOM05D004309 ORTHO05D005588 2.6e-40 169.1 104 76.9
Sc26g0002580 Simmondsia chinensis HOM05D004309 ORTHO05D005588 4.9e-39 164.9 116 69.0
Hma1.2p1_0078F.1_g040630 Hydrangea macrophylla HOM05D004309 ORTHO05D005588 3.9e-36 155.2 88 85.2
Ciclev10006277m.g Citrus clementina HOM05D004309 ORTHO05D005588 1.2e-34 150.2 86 81.4
PRCOL_00005024 Prasinoderma coloniale HOM05D004309 ORTHO05D005588 4.6e-29 131.7 149 52.3
Os03g0421700 Oryza sativa ssp. japonica HOM05D004309 ORTHO05D005588 3.0e-28 129.0 93 69.9
FAN12G2807 Fragaria x ananassa HOM05D005069 ORTHO05D006024 1.3e-23 113.6 56 100.0
Peaxi162Scf00454g00328 Petunia axillaris HOM05D004309 ORTHO05D005588 2.2e-23 112.8 67 79.1
Actinidia27753 Actinidia chinensis HOM05D004309 ORTHO05D005588 1.9e-22 109.8 88 64.8
FAN12G1798 Fragaria x ananassa HOM05D004309 ORTHO05D005588 3.0e-20 102.4 50 100.0
BcaC01g03621 Brassica carinata HOM05D004309 ORTHO05D005588 1.9e-19 99.8 89 61.8
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 4.8e-18 95.1 66 72.7
Peaxi162Scf00267g00046 Petunia axillaris HOM05D004309 ORTHO05D005588 4.0e-17 92.0 52 84.6
Eucgr.C01444 Eucalyptus grandis HOM05D004309 ORTHO05D005588 6.9e-17 91.3 50 86.0
MD04G1020300 Malus domestica HOM05D004309 ORTHO05D005588 6.9e-17 91.3 59 76.3
Haze_27427 Corylus avellana HOM05D004309 ORTHO05D005588 9.9e-16 87.4 135 38.5
Zm00001eb419610 Zea mays HOM05D004309 ORTHO05D005588 2.9e-15 85.9 80 57.5
SMO353G0001 Selaginella moellendorffii HOM05D004309 ORTHO05D005588 6.4e-15 84.7 140 35.7
Cre12.g549450 Chlamydomonas reinhardtii HOM05D004309 ORTHO05D005588 1.6e-13 80.1 133 42.9
Haze_27486 Corylus avellana HOM05D004309 ORTHO05D005588 4.6e-13 78.6 112 40.2
BolC3t17332H Brassica oleracea HOM05D004309 ORTHO05D005588 7.9e-13 77.8 88 52.3
C03p50400 Brassica napus HOM05D004309 ORTHO05D005588 1.5e-11 73.6 88 51.1
RcHm_v2.0_Chr0c32g0501491 Rosa chinensis HOM05D004309 ORTHO05D005588 3.3e-11 72.4 39 92.3
Zm00001eb097870 Zea mays HOM05D004309 ORTHO05D026220 4.3e-11 72.0 68 54.4
Zm00001eb282740 Zea mays HOM05D004309 ORTHO05D005588 4.3e-11 72.0 82 51.2
Zm00001eb085600 Zea mays HOM05D001297 ORTHO05D001135 7.4e-11 71.2 65 55.4
Zm00001eb194540 Zea mays HOM05D004309 ORTHO05D026220 9.6e-11 70.9 64 56.2
Zm00001eb024340 Zea mays HOM05D004309 ORTHO05D026220 2.1e-10 69.7 57 61.4
Zm00001eb423340 Zea mays HOM05D004309 ORTHO05D026220 2.1e-10 69.7 59 59.3
Thhalv10026938m.g Eutrema salsugineum HOM05D004309 ORTHO05D005588 6.2e-10 68.2 42 73.8
Cfa022490 Carpinus fangiana HOM05D004309 ORTHO05D005588 1.4e-09 67.0 109 37.6
PRCOL_00000256 Prasinoderma coloniale HOM05D004309 ORTHO05D005588 1.5e-08 63.5 119 33.6
Zm00001eb170420 Zea mays HOM05D004309 ORTHO05D026220 2.6e-08 62.8 60 58.3
Pp3s34_290 Physcomitrium patens HOM05D000879 ORTHO05D000265 3.4e-08 62.4 138 31.9


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