Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2868 Fragaria x ananassa HOM05D000023 ORTHO05D000014 6.2e-31 136.7 65 100.0
FvH4_4g12491 Fragaria vesca HOM05D000023 ORTHO05D000014 2.5e-24 114.8 65 86.2
FvH4_2g14331 Fragaria vesca HOM05D000023 ORTHO05D000014 1.6e-18 95.5 65 70.8
FvH4_2g16371 Fragaria vesca HOM05D000023 ORTHO05D000014 1.6e-18 95.5 65 69.2
FAN12G0342 Fragaria x ananassa HOM05D000023 ORTHO05D000014 1.0e-17 92.8 64 71.9
FvH4_5g23531 Fragaria vesca HOM05D000023 ORTHO05D000014 1.3e-17 92.4 65 67.7
RcHm_v2.0_Chr6g0295001 Rosa chinensis HOM05D000023 ORTHO05D000014 2.7e-10 68.2 65 52.3
RcHm_v2.0_Chr4g0420941 Rosa chinensis HOM05D000023 ORTHO05D000014 1.8e-09 65.5 65 50.8
SHI06024 Sapria himalayana HOM05D000023 ORTHO05D000014 2.3e-09 65.1 59 50.8
SHI36074 Sapria himalayana HOM05D000023 ORTHO05D000014 2.3e-09 65.1 59 50.8
SHI27157 Sapria himalayana HOM05D000023 ORTHO05D000014 3.0e-09 64.7 59 49.2
SHI04614 Sapria himalayana HOM05D000024 ORTHO05D000014 6.7e-09 63.5 57 50.9
FvH4_5g08811 Fragaria vesca HOM05D000023 ORTHO05D000014 8.7e-09 63.2 57 50.9
SHI07290 Sapria himalayana HOM05D000023 ORTHO05D000014 1.9e-08 62.0 59 47.5
SHI01148 Sapria himalayana HOM05D000023 ORTHO05D000014 2.5e-08 61.6 59 49.2
SHI21487 Sapria himalayana HOM05D000023 ORTHO05D000014 2.5e-08 61.6 54 51.9
FvH4_7g16804 Fragaria vesca HOM05D000023 ORTHO05D000014 3.3e-08 61.2 64 43.8
SHI08605 Sapria himalayana HOM05D000105 ORTHO05D000014 4.3e-08 60.8 57 49.1
SHI34536 Sapria himalayana HOM05D000004 ORTHO05D000563 5.7e-08 60.5 57 47.4
SHI50964 Sapria himalayana HOM05D000023 ORTHO05D000014 5.7e-08 60.5 59 45.8
FAN14G3460 Fragaria x ananassa HOM05D000023 ORTHO05D000014 7.4e-08 60.1 44 61.4
CARHR056780 Cardamine hirsuta HOM05D000023 ORTHO05D000014 9.7e-08 59.7 59 47.5
SHI14569 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-07 59.3 58 46.6
SHI20813 Sapria himalayana HOM05D000898 ORTHO05D000762 1.3e-07 59.3 54 50.0
SHI49901 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-07 59.3 54 50.0
AUR62022925 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.6e-07 58.9 60 45.0
AUR62041775 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.6e-07 58.9 60 45.0
FvH4_2g26163 Fragaria vesca HOM05D000023 ORTHO05D000014 1.6e-07 58.9 64 43.8
Atru.chr6.596 Acer truncatum HOM05D000023 ORTHO05D000014 2.2e-07 58.5 57 47.4
BolC6t36018H Brassica oleracea HOM05D000023 ORTHO05D000014 2.2e-07 58.5 60 48.3
Medtr6g023775 Medicago truncatula HOM05D013837 ORTHO05D000014 2.2e-07 58.5 61 49.2
SHI27495 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-07 58.5 57 45.6
SHI21389 Sapria himalayana HOM05D000023 ORTHO05D000014 2.8e-07 58.2 59 45.8
SHI26235 Sapria himalayana HOM05D000023 ORTHO05D000014 2.8e-07 58.2 54 50.0
Lj2g0007711 Lotus japonicus HOM05D000023 ORTHO05D000014 3.7e-07 57.8 61 39.3
PSO017G1031 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-07 57.8 60 46.7
PSO017G4761 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-07 57.8 60 46.7
PSO063G1377 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-07 57.8 60 46.7
PSO063G2876 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-07 57.8 60 46.7
PSO063G3226 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-07 57.8 60 46.7
PSO063G7620 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-07 57.8 60 46.7
PSO170G1947 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-07 57.8 60 46.7
PSO170G3895 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-07 57.8 60 46.7
PSO210G0286 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-07 57.8 60 46.7
PSO478G1709 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-07 57.8 60 46.7
PSO478G3870 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-07 57.8 60 46.7
PSO675G6543 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-07 57.8 60 46.7
PSO675G8000 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-07 57.8 60 46.7
C04p23460 Brassica napus HOM05D000023 ORTHO05D000014 4.8e-07 57.4 60 46.7
Dinv11853 Davidia involucrata HOM05D000023 ORTHO05D000014 4.8e-07 57.4 63 46.0
Lj2g0000793 Lotus japonicus HOM05D000023 ORTHO05D000014 4.8e-07 57.4 61 39.3
PSO063G4346 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 57.4 60 46.7
Atru.chr11.1499 Acer truncatum HOM05D000023 ORTHO05D000014 6.3e-07 57.0 57 43.9
AUR62005034 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 60 43.3
AUR62010486 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 60 43.3
AUR62010568 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 63 41.3
AUR62016849 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 60 43.3
AUR62017341 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 60 43.3
AUR62019364 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 60 43.3
AUR62024763 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 60 43.3
AUR62030082 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 60 43.3
AUR62032748 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 60 43.3
AUR62033875 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 60 43.3
AUR62035427 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 60 43.3
AUR62035857 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 60 43.3
AUR62038522 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 60 43.3
AUR62042701 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 60 43.3
AUR62044734 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.3e-07 57.0 63 41.3
AUR62019609 Chenopodium quinoa HOM05D000023 ORTHO05D000014 8.2e-07 56.6 60 43.3
PSO104G0268 Papaver somniferum HOM05D000023 ORTHO05D000014 8.2e-07 56.6 60 45.0
PSO339G3077 Papaver somniferum HOM05D000023 ORTHO05D000014 8.2e-07 56.6 60 46.7
PSO063G2055 Papaver somniferum HOM05D000023 ORTHO05D000014 1.4e-06 55.8 60 45.0
PSO782G3350 Papaver somniferum HOM05D000023 ORTHO05D000014 1.4e-06 55.8 60 45.0
TPR.G6135 Trifolium pratense HOM05D000023 ORTHO05D000014 1.8e-06 55.5 63 44.4
RcHm_v2.0_Chr4g0434271 Rosa chinensis HOM05D000023 ORTHO05D000014 2.4e-06 55.1 63 46.0
RcHm_v2.0_Chr4g0442721 Rosa chinensis HOM05D000023 ORTHO05D000014 2.4e-06 55.1 63 46.0
RcHm_v2.0_Chr7g0205371 Rosa chinensis HOM05D000023 ORTHO05D000014 2.4e-06 55.1 63 46.0
SHI09321 Sapria himalayana HOM05D000023 ORTHO05D000014 2.4e-06 55.1 54 48.1
Medtr1g057450 Medicago truncatula HOM05D000023 ORTHO05D000014 3.1e-06 54.7 61 45.9
SHI28165 Sapria himalayana HOM05D000023 ORTHO05D000014 4.1e-06 54.3 57 43.9
CSS0001645 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.9e-06 53.5 63 42.9
CSS0033012 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.9e-06 53.5 63 42.9
CSS0035965 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.9e-06 53.5 63 42.9
CSS0038804 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.9e-06 53.5 63 42.9
CSS0046574 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.9e-06 53.5 63 42.9
CSS0046830 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.9e-06 53.5 63 42.9
Dinv10684 Davidia involucrata HOM05D000023 ORTHO05D000014 6.9e-06 53.5 61 42.6
Oeu061850.1 Olea europaea HOM05D000023 ORTHO05D000014 9.0e-06 53.1 60 41.7
TWI18G0892 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 9.0e-06 53.1 63 41.3
TWI63G0054 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 9.0e-06 53.1 63 41.3


User provided reference genes

Program Settings