Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.5e-101 372.9 190 100.0
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.5e-90 335.1 190 92.6
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 9.8e-85 317.0 190 89.5
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 6.4e-84 314.3 190 88.4
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 6.4e-84 314.3 190 88.4
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 1.4e-83 313.2 190 88.4
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 5.4e-83 311.2 197 85.3
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 5.4e-83 311.2 189 88.4
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 5.4e-83 311.2 190 87.9
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 1.2e-82 310.1 190 87.9
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 1.2e-82 310.1 190 87.9
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 1.6e-82 309.7 190 86.3
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 2.0e-82 309.3 197 84.8
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 6.0e-82 307.8 190 87.4
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 7.8e-82 307.4 190 86.8
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 7.8e-82 307.4 190 86.3
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 7.8e-82 307.4 190 86.3
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 1.0e-81 307.0 190 85.8
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 1.3e-81 306.6 190 85.3
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 1.7e-81 306.2 190 86.8
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 1.7e-81 306.2 190 86.3
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 1.7e-81 306.2 189 86.8
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 1.7e-81 306.2 190 85.8
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 3.0e-81 305.4 190 86.3
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.0e-81 305.4 190 86.8
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 3.0e-81 305.4 190 85.8
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 3.0e-81 305.4 190 85.8
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 3.0e-81 305.4 190 85.3
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 3.0e-81 305.4 190 85.8
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 3.9e-81 305.1 190 85.8
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 3.9e-81 305.1 189 86.8
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.0e-81 304.7 190 85.3
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 6.6e-81 304.3 190 85.3
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 6.6e-81 304.3 189 85.7
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 1.1e-80 303.5 190 85.3
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.1e-80 303.5 190 85.3
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.1e-80 303.5 190 85.3
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 1.1e-80 303.5 190 85.8
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 1.5e-80 303.1 190 84.7
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 1.5e-80 303.1 190 85.8
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 2.5e-80 302.4 190 85.3
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 3.3e-80 302.0 190 84.2
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 3.3e-80 302.0 190 84.7
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 4.3e-80 301.6 190 84.2
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 4.3e-80 301.6 188 85.6
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 4.3e-80 301.6 188 85.6
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 4.3e-80 301.6 188 85.6
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 5.6e-80 301.2 190 84.7
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 7.3e-80 300.8 190 84.7
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 9.5e-80 300.4 190 84.7
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 9.5e-80 300.4 190 84.7
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 1.2e-79 300.1 190 85.3
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 2.8e-79 298.9 187 86.6
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 3.6e-79 298.5 190 83.7
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 3.6e-79 298.5 188 83.0
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 3.6e-79 298.5 190 83.7
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 1.4e-78 296.6 190 83.2
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 1.4e-78 296.6 190 83.2
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 1.4e-78 296.6 189 84.1
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 1.4e-78 296.6 190 83.2
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 1.4e-78 296.6 190 83.7
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 1.8e-78 296.2 190 83.2
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 3.1e-78 295.4 190 83.2
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 3.1e-78 295.4 190 82.6
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 1.2e-77 293.5 189 83.1
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 1.5e-77 293.1 188 83.0
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 3.4e-77 292.0 190 81.1
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 7.5e-77 290.8 208 76.4
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 1.7e-76 289.7 187 81.8
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 2.2e-76 289.3 186 81.7
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 3.7e-76 288.5 190 82.6
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 3.2e-75 285.4 177 85.3
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 4.1e-75 285.0 188 80.3
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 6.0e-74 281.2 188 78.7
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 3.0e-73 278.9 177 83.6
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 3.0e-73 278.9 187 78.6
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 7.3e-72 274.2 182 80.8
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 8.1e-71 270.8 184 78.8
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 5.2e-70 268.1 171 84.2
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 1.5e-69 266.5 167 86.2
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 1.5e-69 266.5 170 83.5
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 2.0e-69 266.2 171 83.0
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 7.6e-69 264.2 164 84.1
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 4.9e-68 261.5 167 84.4
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.4e-67 260.0 167 83.8
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 1.9e-67 259.6 268 59.7
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 3.2e-67 258.8 157 85.4
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 1.2e-66 256.9 154 87.0
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.6e-66 256.5 153 87.6
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 1.0e-65 253.8 154 85.7
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 8.6e-65 250.8 189 67.7
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 9.6e-64 247.3 190 72.1
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 8.9e-62 240.7 230 65.2
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.2e-61 240.4 184 72.3
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 1.4e-59 233.4 190 70.0
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 1.4e-59 233.4 190 71.1
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 1.6e-58 229.9 188 68.6
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 1.0e-57 227.3 148 83.8
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 2.3e-57 226.1 239 57.7
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 5.1e-57 224.9 137 87.6
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 1.5e-56 223.4 150 82.0
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.6e-55 219.9 126 92.1
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.6e-55 219.9 126 92.1
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 6.4e-52 208.0 149 75.8
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 5.6e-48 194.9 123 85.4
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 1.6e-47 193.4 124 83.1
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 2.0e-45 186.4 189 52.9
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 8.4e-44 181.0 121 80.2
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 1.4e-38 163.7 196 47.4
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 3.4e-37 159.1 190 51.1
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 5.7e-32 141.7 81 90.1
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 6.3e-31 138.3 132 61.4
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 1.1e-30 137.5 81 87.7
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 2.0e-29 133.3 90 78.9
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 6.7e-25 118.2 75 81.3
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 3.3e-24 115.9 79 75.9
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 1.7e-20 103.6 74 75.7
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 2.5e-19 99.8 54 88.9
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 7.7e-13 78.2 38 89.5
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.1e-10 70.1 39 82.1
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 2.6e-08 63.2 59 57.6


User provided reference genes

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