Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 4.6e-127 458.0 246 100.0
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 3.3e-125 451.8 246 98.8
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.3e-124 449.9 246 98.0
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 6.2e-124 447.6 247 98.0
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.4e-123 445.7 247 97.6
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 1.5e-106 389.8 248 88.7
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 1.8e-75 286.6 260 67.3
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 2.0e-74 283.1 250 69.2
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 1.3e-57 227.3 233 58.4
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 2.5e-56 223.0 236 57.2
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 4.3e-56 222.2 234 56.4
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 8.0e-55 218.0 234 59.0
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 5.2e-54 215.3 234 56.0
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.3e-52 210.7 234 53.4
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 1.3e-52 210.7 234 54.7
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 6.4e-52 208.4 234 54.7
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 9.2e-51 204.5 233 54.5
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 2.0e-50 203.4 233 54.1
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 2.0e-50 203.4 227 52.9
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 3.5e-50 202.6 232 53.9
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 1.0e-49 201.1 236 53.8
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 1.7e-49 200.3 221 53.8
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 5.0e-49 198.7 239 53.6
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 6.6e-49 198.4 218 55.5
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 2.5e-48 196.4 214 59.8
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 9.5e-48 194.5 203 57.6
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 2.8e-47 193.0 260 49.2
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 2.3e-46 189.9 235 51.9
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 3.4e-45 186.0 198 57.1
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 5.8e-45 185.3 261 47.9
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.3e-44 184.1 220 52.3
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 1.7e-44 183.7 223 50.2
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 2.2e-44 183.3 241 46.9
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 2.2e-44 183.3 214 51.9
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 3.7e-44 182.6 229 51.1
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 1.1e-43 181.0 236 48.7
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 1.1e-43 181.0 199 55.3
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 3.2e-43 179.5 251 45.4
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 3.2e-43 179.5 219 51.1
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 3.2e-43 179.5 197 55.8
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 4.1e-43 179.1 217 47.9
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 4.1e-43 179.1 197 54.3
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 1.2e-42 177.6 222 49.5
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 2.7e-42 176.4 222 48.6
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 3.5e-42 176.0 200 52.5
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 3.5e-42 176.0 222 49.5
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 7.8e-42 174.9 239 47.3
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 1.3e-41 174.1 240 48.3
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 1.3e-41 174.1 234 49.1
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 2.3e-41 173.3 199 52.8
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 1.1e-40 171.0 222 45.5
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 1.5e-40 170.6 200 51.0
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 1.9e-40 170.2 205 52.2
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 2.5e-40 169.9 234 49.1
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 4.3e-40 169.1 222 48.2
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 7.3e-40 168.3 237 45.1
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 9.5e-40 167.9 235 46.0
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 1.2e-39 167.5 215 51.2
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.2e-39 167.5 235 46.0
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 1.6e-39 167.2 243 44.9
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 2.8e-39 166.4 229 46.3
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 6.2e-39 165.2 234 46.2
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 8.1e-39 164.9 222 46.4
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 1.1e-38 164.5 233 45.1
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 1.1e-38 164.5 222 46.4
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 5.2e-38 162.2 233 45.1
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 5.2e-38 162.2 184 55.4
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 5.2e-38 162.2 229 45.9
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 1.5e-37 160.6 275 42.5
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 2.6e-37 159.8 231 42.4
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 5.8e-37 158.7 222 47.3
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 2.9e-36 156.4 235 43.8
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 2.9e-36 156.4 237 41.8
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 3.8e-36 156.0 231 44.6
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 1.4e-35 154.1 225 44.0
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 1.9e-35 153.7 199 49.2
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 1.9e-35 153.7 242 46.7
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.7e-34 149.8 233 42.5
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 3.5e-34 149.4 203 43.8
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 5.1e-33 145.6 232 44.0
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 7.3e-32 141.7 233 42.1
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 9.6e-32 141.4 245 39.6
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 9.6e-32 141.4 241 40.7
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 2.1e-31 140.2 222 40.5
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 4.7e-31 139.0 242 40.9
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 6.9e-30 135.2 118 61.9
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.3e-28 131.0 195 46.2
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 6.4e-28 128.6 207 42.5
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.9e-27 127.1 243 40.3
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 1.9e-27 127.1 167 47.3
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 2.4e-27 126.7 112 59.8
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.7e-26 123.2 219 43.8
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 4.6e-26 122.5 187 44.9
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.5e-24 117.5 221 40.3
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 4.3e-24 115.9 222 37.8
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 9.6e-24 114.8 256 38.3
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 1.3e-23 114.4 102 58.8
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 2.4e-22 110.2 105 55.2
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 3.1e-22 109.8 256 37.5
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 3.1e-22 109.8 256 37.5
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 3.1e-22 109.8 256 37.5
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 5.3e-22 109.0 259 37.8
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 6.9e-22 108.6 239 38.9
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 1.2e-21 107.8 110 53.6
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 1.2e-21 107.8 221 38.0
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 1.5e-21 107.5 221 37.6
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 1.5e-21 107.5 221 37.6
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 1.5e-21 107.5 188 40.4
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 2.6e-21 106.7 253 37.9
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 5.8e-21 105.5 222 39.6
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 9.9e-21 104.8 179 41.3
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 9.9e-21 104.8 221 37.1
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 1.3e-20 104.4 220 39.1
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 2.9e-20 103.2 221 37.6
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 3.8e-20 102.8 220 38.2
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 4.9e-20 102.4 218 37.6
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.4e-19 100.9 220 39.1
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 5.4e-19 99.0 246 35.8
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 1.6e-18 97.4 206 37.9
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 2.7e-18 96.7 112 50.9
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 4.6e-18 95.9 178 35.4
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 1.0e-17 94.7 108 50.9
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 2.3e-17 93.6 166 38.6
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 6.7e-17 92.0 112 48.2
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 5.6e-16 89.0 232 31.0
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 7.4e-16 88.6 249 33.7
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 7.4e-16 88.6 237 35.4
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.4e-11 73.6 146 39.0
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 1.8e-09 67.4 117 40.2
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 8.7e-09 65.1 134 32.8


User provided reference genes

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