Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2759 Fragaria x ananassa HOM05D008471 ORTHO05D002579 1.5e-71 272.7 138 100.0
FAN04G1707 Fragaria x ananassa HOM05D008471 ORTHO05D002579 6.3e-57 224.2 152 79.6
FAN26G0752 Fragaria x ananassa HOM05D008471 ORTHO05D002579 4.1e-56 221.5 153 79.1
FAN15G3334 Fragaria x ananassa HOM05D008471 ORTHO05D002579 1.2e-47 193.4 131 79.4
FAN21G3506 Fragaria x ananassa HOM05D008471 ORTHO05D002579 5.9e-47 191.0 133 77.4
FAN10G1154 Fragaria x ananassa HOM05D008471 ORTHO05D002579 1.3e-41 173.3 149 65.1
FAN04G0955 Fragaria x ananassa HOM05D008471 ORTHO05D002579 2.8e-41 172.2 159 62.9
FAN13G2080 Fragaria x ananassa HOM05D008471 ORTHO05D002579 4.8e-41 171.4 158 63.3
FAN23G0830 Fragaria x ananassa HOM05D008471 ORTHO05D002579 2.4e-40 169.1 141 65.2
FAN09G0460 Fragaria x ananassa HOM05D008471 ORTHO05D002579 7.0e-40 167.5 159 61.6
FAN13G0880 Fragaria x ananassa HOM05D008471 ORTHO05D002579 7.0e-40 167.5 155 63.2
FAN13G2411 Fragaria x ananassa HOM05D008471 ORTHO05D002579 7.0e-40 167.5 155 63.2
FAN07G0864 Fragaria x ananassa HOM05D008471 ORTHO05D002579 1.0e-38 163.7 158 61.4
FAN09G0989 Fragaria x ananassa HOM05D008471 ORTHO05D002579 1.3e-38 163.3 159 61.6
FAN21G2034 Fragaria x ananassa HOM05D008471 ORTHO05D002579 5.0e-38 161.4 158 60.8
FAN10G0735 Fragaria x ananassa HOM05D008471 ORTHO05D002579 6.5e-38 161.0 158 60.1
FAN10G2515 Fragaria x ananassa HOM05D008471 ORTHO05D002579 2.5e-37 159.1 159 59.7
FAN05G1862 Fragaria x ananassa HOM05D008471 ORTHO05D002579 3.2e-37 158.7 158 60.1
FAN25G0365 Fragaria x ananassa HOM05D008471 ORTHO05D002579 3.2e-37 158.7 158 59.5
FAN23G2150 Fragaria x ananassa HOM05D008471 ORTHO05D002579 5.5e-37 157.9 160 58.8
FAN16G3285 Fragaria x ananassa HOM05D008471 ORTHO05D002579 2.1e-36 156.0 140 63.6
FAN07G2179 Fragaria x ananassa HOM05D008471 ORTHO05D002579 8.0e-36 154.1 148 61.5
FAN09G1080 Fragaria x ananassa HOM05D008471 ORTHO05D002579 1.8e-35 152.9 158 59.5
FAN23G2588 Fragaria x ananassa HOM05D008471 ORTHO05D002579 8.6e-30 134.0 137 59.9
FAN23G2558 Fragaria x ananassa HOM05D008471 ORTHO05D002579 1.9e-29 132.9 152 54.6
FAN22G1510 Fragaria x ananassa HOM05D008471 ORTHO05D002579 1.7e-25 119.8 123 55.3
FAN16G0594 Fragaria x ananassa HOM05D008471 ORTHO05D002579 8.3e-25 117.5 67 85.1
FvH4_3g31360 Fragaria vesca HOM05D002894 ORTHO05D002579 9.2e-24 114.0 130 46.9
FvH4_5g22540 Fragaria vesca HOM05D000047 ORTHO05D000044 2.9e-22 109.0 148 41.9
FAN23G2091 Fragaria x ananassa HOM05D008471 ORTHO05D002579 2.5e-21 105.9 171 36.8
FAN17G2218 Fragaria x ananassa HOM05D008471 ORTHO05D002579 2.6e-18 95.9 117 53.8
FAN25G3840 Fragaria x ananassa HOM05D002894 ORTHO05D002579 2.9e-17 92.4 166 36.7
FAN23G0477 Fragaria x ananassa HOM05D002894 ORTHO05D002579 8.3e-17 90.9 179 34.1
FAN23G0867 Fragaria x ananassa HOM05D002894 ORTHO05D002579 9.2e-16 87.4 172 36.0
FAN17G1527 Fragaria x ananassa HOM05D002894 ORTHO05D002579 6.0e-15 84.7 178 34.8
FAN25G1003 Fragaria x ananassa HOM05D002894 ORTHO05D002579 6.0e-15 84.7 178 33.1
FAN10G0062 Fragaria x ananassa HOM05D002894 ORTHO05D002579 1.6e-12 76.6 104 45.2
FAN22G2237 Fragaria x ananassa HOM05D008471 ORTHO05D002579 2.1e-12 76.3 98 49.0
FAN22G1168 Fragaria x ananassa HOM05D002894 ORTHO05D002579 2.8e-12 75.9 179 31.3
FAN02G0154 Fragaria x ananassa HOM05D002894 ORTHO05D002579 3.6e-12 75.5 157 33.1
FAN26G0632 Fragaria x ananassa HOM05D002894 ORTHO05D002579 1.1e-11 73.9 174 32.2
FAN05G2319 Fragaria x ananassa HOM05D008471 ORTHO05D002579 2.0e-10 69.7 60 66.7
FAN27G2644 Fragaria x ananassa HOM05D008471 ORTHO05D002579 3.4e-10 68.9 90 47.8
FAN05G4375 Fragaria x ananassa HOM05D008471 ORTHO05D002579 9.8e-10 67.4 88 50.0
FAN22G2082 Fragaria x ananassa HOM05D008471 ORTHO05D002579 1.7e-09 66.6 35 88.6
FAN02G1052 Fragaria x ananassa HOM05D002894 ORTHO05D002579 3.7e-09 65.5 161 32.9
FAN17G2293 Fragaria x ananassa HOM05D002894 ORTHO05D002579 3.7e-09 65.5 51 51.0
FvH4_3g22806 Fragaria vesca HOM05D000047 ORTHO05D001383 6.4e-09 64.7 57 47.4
CAN.G1180.13 Capsicum annuum HOM05D000047 ORTHO05D001383 8.3e-09 64.3 58 48.3
Sopen01g017640 Solanum pennellii HOM05D000047 ORTHO05D001383 1.4e-08 63.5 61 42.6
FvH4_2g15191 Fragaria vesca HOM05D000047 ORTHO05D001383 2.4e-08 62.8 57 42.1
FvH4_6g13112 Fragaria vesca HOM05D000047 ORTHO05D001383 2.4e-08 62.8 57 42.1
CANSAT54G2851 Cannabis sativa HOM05D008471 ORTHO05D002579 3.2e-08 62.4 135 31.9
FvH4_7g03661 Fragaria vesca HOM05D000047 ORTHO05D001383 3.2e-08 62.4 52 46.2
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 3.2e-08 62.4 57 45.6
COL.COLO4_37721 Corchorus olitorius HOM05D009817 ORTHO05D006740 5.4e-08 61.6 61 45.9
MBI11_g38793_MAGBIO Magnolia biondii HOM05D008379 ORTHO05D006740 7.1e-08 61.2 62 45.2
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 7.1e-08 61.2 57 43.9
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 7.1e-08 61.2 57 43.9
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 7.1e-08 61.2 57 43.9
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 7.1e-08 61.2 57 43.9
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 7.1e-08 61.2 57 43.9
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 7.1e-08 61.2 57 43.9
FvH4_4g22271 Fragaria vesca HOM05D000047 ORTHO05D001383 9.2e-08 60.8 57 40.4
Sopen06g006960 Solanum pennellii HOM05D021371 ORTHO05D018133 9.2e-08 60.8 56 42.9
Sopen12g027080 Solanum pennellii HOM05D000047 ORTHO05D012839 9.2e-08 60.8 53 45.3
TWI12G0387 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 9.2e-08 60.8 57 43.9
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 9.2e-08 60.8 57 43.9
FAN13G0634 Fragaria x ananassa HOM05D008471 ORTHO05D002579 1.2e-07 60.5 58 62.1
MBI13_g17199_MAGBIO Magnolia biondii HOM05D008379 ORTHO05D006740 1.2e-07 60.5 83 41.0
MBI15_g46892_MAGBIO Magnolia biondii HOM05D008379 ORTHO05D006740 1.2e-07 60.5 62 45.2
Sed0016307 Sechium edule HOM05D008471 ORTHO05D006740 1.2e-07 60.5 51 49.0
COL.COLO4_10629 Corchorus olitorius HOM05D009817 ORTHO05D006740 1.6e-07 60.1 61 44.3
COL.COLO4_15853 Corchorus olitorius HOM05D009817 ORTHO05D006740 1.6e-07 60.1 61 44.3
COL.COLO4_20276 Corchorus olitorius HOM05D009817 ORTHO05D006740 1.6e-07 60.1 61 44.3
COL.COLO4_37140 Corchorus olitorius HOM05D009817 ORTHO05D006740 1.6e-07 60.1 61 44.3
COL.COLO4_37705 Corchorus olitorius HOM05D009817 ORTHO05D006740 1.6e-07 60.1 61 44.3
MBI13_g09589_MAGBIO Magnolia biondii HOM05D008379 ORTHO05D006740 2.1e-07 59.7 55 43.6
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 2.1e-07 59.7 57 42.1
Sopen04g024170 Solanum pennellii HOM05D000047 ORTHO05D001383 2.1e-07 59.7 57 42.1
Sopen10g013080 Solanum pennellii HOM05D000047 ORTHO05D001383 2.1e-07 59.7 57 42.1
Sopen12g025220 Solanum pennellii HOM05D000047 ORTHO05D001383 2.1e-07 59.7 57 42.1
FAN17G0418 Fragaria x ananassa HOM05D002894 ORTHO05D002579 2.7e-07 59.3 113 38.1
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 2.7e-07 59.3 57 43.9
Sopen02g001620 Solanum pennellii HOM05D000047 ORTHO05D001383 2.7e-07 59.3 57 42.1
FvH4_4g01161 Fragaria vesca HOM05D000047 ORTHO05D001383 3.5e-07 58.9 101 34.7
FAN03G0787 Fragaria x ananassa HOM05D008471 ORTHO05D209878 3.5e-07 58.9 34 82.4
FAN13G2853 Fragaria x ananassa HOM05D002894 ORTHO05D002579 3.5e-07 58.9 114 36.8
Sed0006626 Sechium edule HOM05D008471 ORTHO05D006740 3.5e-07 58.9 50 44.0
COL.COLO4_20280 Corchorus olitorius HOM05D009817 ORTHO05D006740 4.6e-07 58.5 57 45.6
MBI01_g21548_MAGBIO Magnolia biondii HOM05D008379 ORTHO05D006740 4.6e-07 58.5 77 40.3
MBI10_g22585_MAGBIO Magnolia biondii HOM05D008379 ORTHO05D006740 4.6e-07 58.5 64 46.9
PGSC0003DMG400004225 Solanum tuberosum HOM05D000047 ORTHO05D001383 4.6e-07 58.5 53 47.2
QL02p080030 Quercus lobata HOM05D000047 ORTHO05D000044 6.0e-07 58.2 57 42.1
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 6.0e-07 58.2 57 42.1
Sopen02g004180 Solanum pennellii HOM05D000047 ORTHO05D001383 6.0e-07 58.2 57 40.4
Sopen02g008570 Solanum pennellii HOM05D000047 ORTHO05D001383 6.0e-07 58.2 57 40.4
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 6.0e-07 58.2 57 40.4
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 6.0e-07 58.2 57 40.4
Sopen04g012780 Solanum pennellii HOM05D000047 ORTHO05D001383 6.0e-07 58.2 57 40.4
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 6.0e-07 58.2 57 40.4
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 6.0e-07 58.2 57 40.4
Sopen06g006890 Solanum pennellii HOM05D000047 ORTHO05D001383 6.0e-07 58.2 57 40.4
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 6.0e-07 58.2 57 40.4
Sopen07g020380 Solanum pennellii HOM05D000047 ORTHO05D001383 6.0e-07 58.2 57 40.4
Sopen07g025200 Solanum pennellii HOM05D000047 ORTHO05D001383 6.0e-07 58.2 57 40.4
Sopen10g007420 Solanum pennellii HOM05D000047 ORTHO05D001383 6.0e-07 58.2 57 40.4
Sopen10g027330 Solanum pennellii HOM05D000047 ORTHO05D001383 6.0e-07 58.2 57 40.4
Sopen12g011840 Solanum pennellii HOM05D000047 ORTHO05D000044 6.0e-07 58.2 57 40.4
Sopen12g012050 Solanum pennellii HOM05D000047 ORTHO05D001383 6.0e-07 58.2 57 40.4
CAN.G1967.2 Capsicum annuum HOM05D002351 ORTHO05D002501 7.8e-07 57.8 41 51.2
CAN.G896.8 Capsicum annuum HOM05D002351 ORTHO05D002501 7.8e-07 57.8 41 51.2
FAN09G2731 Fragaria x ananassa HOM05D002894 ORTHO05D002579 7.8e-07 57.8 46 52.2
FAN22G1083 Fragaria x ananassa HOM05D002894 ORTHO05D002579 7.8e-07 57.8 79 45.6
FAN22G2373 Fragaria x ananassa HOM05D002894 ORTHO05D002579 7.8e-07 57.8 79 45.6
MBI14_g41646_MAGBIO Magnolia biondii HOM05D008379 ORTHO05D006740 7.8e-07 57.8 77 42.9
MBI16_g01174_MAGBIO Magnolia biondii HOM05D008379 ORTHO05D006740 7.8e-07 57.8 45 48.9
Potri.001G184575 Populus trichocarpa HOM05D000047 ORTHO05D001383 7.8e-07 57.8 96 32.3
FAN17G2139 Fragaria x ananassa HOM05D002894 ORTHO05D002579 1.0e-06 57.4 39 59.0
MBI14_g24984_MAGBIO Magnolia biondii HOM05D008379 ORTHO05D006740 1.0e-06 57.4 56 50.0
Potri.010G156001 Populus trichocarpa HOM05D000047 ORTHO05D001383 1.0e-06 57.4 143 28.0
Sopen02g010170 Solanum pennellii HOM05D000047 ORTHO05D001383 1.0e-06 57.4 57 40.4
Sopen10g018840 Solanum pennellii HOM05D000047 ORTHO05D001383 1.0e-06 57.4 57 40.4
FvH4_6g53790 Fragaria vesca HOM05D000047 ORTHO05D006740 1.3e-06 57.0 64 37.5
MBI16_g15559_MAGBIO Magnolia biondii HOM05D008379 ORTHO05D006740 1.3e-06 57.0 56 46.4
Potri.001G433100 Populus trichocarpa HOM05D000047 ORTHO05D001383 1.3e-06 57.0 59 40.7
Sopen09g010930 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-06 57.0 61 44.3
Sopen10g018410 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-06 57.0 47 46.8
COL.COLO4_15563 Corchorus olitorius HOM05D009817 ORTHO05D006740 1.7e-06 56.6 48 47.9
MBI07_g04026_MAGBIO Magnolia biondii HOM05D008379 ORTHO05D006740 1.7e-06 56.6 53 50.9
Sopen09g022170 Solanum pennellii HOM05D000047 ORTHO05D001383 1.7e-06 56.6 57 40.4
Sopen10g017260 Solanum pennellii HOM05D000047 ORTHO05D000044 1.7e-06 56.6 52 46.2
COL.COLO4_16538 Corchorus olitorius HOM05D009817 ORTHO05D006740 2.3e-06 56.2 61 42.6
COL.COLO4_29986 Corchorus olitorius HOM05D009817 ORTHO05D006740 2.3e-06 56.2 61 42.6
MBI12_g01752_MAGBIO Magnolia biondii HOM05D008568 ORTHO05D006740 2.3e-06 56.2 46 52.2
Sopen02g004290 Solanum pennellii HOM05D000047 ORTHO05D001383 2.3e-06 56.2 52 44.2
Sopen04g011740 Solanum pennellii HOM05D000047 ORTHO05D000044 2.3e-06 56.2 127 28.3
Sopen07g006060 Solanum pennellii HOM05D000047 ORTHO05D000044 2.3e-06 56.2 57 40.4
COL.COLO4_13591 Corchorus olitorius HOM05D009817 ORTHO05D006740 3.0e-06 55.8 61 42.6
FvH4_3g26704 Fragaria vesca HOM05D000047 ORTHO05D001383 3.0e-06 55.8 53 41.5
MBI15_g23244_MAGBIO Magnolia biondii HOM05D008379 ORTHO05D006740 3.0e-06 55.8 71 38.0
MBI18_g04360_MAGBIO Magnolia biondii HOM05D008379 ORTHO05D006740 3.0e-06 55.8 57 42.1
Sopen05g014160 Solanum pennellii HOM05D000047 ORTHO05D001383 3.0e-06 55.8 56 42.9
Sopen09g012580 Solanum pennellii HOM05D000047 ORTHO05D001383 3.0e-06 55.8 57 38.6
Sopen11g022540 Solanum pennellii HOM05D000047 ORTHO05D001383 3.9e-06 55.5 57 36.8
FvH4_2g31621 Fragaria vesca HOM05D000047 ORTHO05D001383 5.1e-06 55.1 134 27.6
FAN16G2310 Fragaria x ananassa HOM05D002894 ORTHO05D002579 5.1e-06 55.1 72 47.2
FAN25G0151 Fragaria x ananassa HOM05D008471 ORTHO05D002579 5.1e-06 55.1 44 68.2
MBI05_g18490_MAGBIO Magnolia biondii HOM05D007668 ORTHO05D006740 5.1e-06 55.1 62 41.9
MBI19_g26464_MAGBIO Magnolia biondii HOM05D008379 ORTHO05D006740 5.1e-06 55.1 55 41.8
FAN02G3495 Fragaria x ananassa HOM05D002894 ORTHO05D002579 6.6e-06 54.7 67 49.3
FAN27G2393 Fragaria x ananassa HOM05D002894 ORTHO05D002579 8.6e-06 54.3 66 50.0
FAN27G3084 Fragaria x ananassa HOM05D002894 ORTHO05D002579 8.6e-06 54.3 66 50.0
Sopen04g021440 Solanum pennellii HOM05D000309 ORTHO05D001383 8.6e-06 54.3 57 38.6
Sopen08g020970 Solanum pennellii HOM05D000047 ORTHO05D000044 8.6e-06 54.3 57 38.6


User provided reference genes

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