Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2753 Fragaria x ananassa HOM05D001825 ORTHO05D010533 9.1e-19 98.2 50 100.0
Rhsim04G0247100 Rhododendron simsii HOM05D001825 ORTHO05D002336 2.1e-15 87.0 45 100.0
DCAR_023674 Daucus carota HOM05D001825 ORTHO05D002336 8.0e-15 85.1 45 97.8
BcaC01g01699 Brassica carinata HOM05D001825 ORTHO05D002336 1.4e-14 84.3 47 91.5
BolC3t19588H Brassica oleracea HOM05D001825 ORTHO05D002336 1.4e-14 84.3 47 91.5
vmacro10543 Vaccinium macrocarpon HOM05D001825 ORTHO05D002336 2.3e-14 83.6 44 95.5
FAN17G0698 Fragaria x ananassa HOM05D001825 ORTHO05D010533 3.0e-14 83.2 43 100.0
BraA09t38092Z Brassica rapa HOM05D001825 ORTHO05D010533 1.5e-13 80.9 46 91.3
MBI19_g40801_MAGBIO Magnolia biondii HOM05D001825 ORTHO05D002336 8.2e-12 75.1 46 84.8
RcHm_v2.0_Chr7g0238001 Rosa chinensis HOM05D001825 ORTHO05D010533 1.1e-11 74.7 53 81.1
CDE12G0569 Ceratophyllum demersum HOM05D001825 ORTHO05D010533 3.1e-11 73.2 38 97.4
MBI15_g38794_MAGBIO Magnolia biondii HOM05D001825 ORTHO05D002336 7.0e-11 72.0 42 88.1
RcHm_v2.0_Chr5g0039511 Rosa chinensis HOM05D001825 ORTHO05D010533 9.1e-11 71.6 51 80.4
Cfa018613 Carpinus fangiana HOM05D001825 ORTHO05D002336 2.7e-10 70.1 36 97.2
Cfa019793 Carpinus fangiana HOM05D001825 ORTHO05D002336 2.7e-10 70.1 36 97.2
Haze_18656 Corylus avellana HOM05D001825 ORTHO05D002336 2.7e-10 70.1 36 97.2
Nitab4.5_0011561g0040 Nicotiana tabacum HOM05D001825 ORTHO05D002336 2.7e-10 70.1 36 97.2
Peaxi162Scf00013g00935 Petunia axillaris HOM05D001825 ORTHO05D002336 2.7e-10 70.1 36 97.2
SalBow8G3841 Salvia bowleyana HOM05D001825 ORTHO05D002336 2.7e-10 70.1 36 97.2
Actinidia16634 Actinidia chinensis HOM05D001825 ORTHO05D010533 1.0e-09 68.2 35 97.1
Actinidia39822 Actinidia chinensis HOM05D001825 ORTHO05D002336 1.0e-09 68.2 35 97.1
Nitab4.5_0003823g0090 Nicotiana tabacum HOM05D001825 ORTHO05D002336 1.0e-09 68.2 36 94.4
Nitab4.5_0004895g0070 Nicotiana tabacum HOM05D001825 ORTHO05D002336 1.0e-09 68.2 36 94.4
Nitab4.5_0010801g0030 Nicotiana tabacum HOM05D001825 ORTHO05D002336 1.0e-09 68.2 35 97.1
Peaxi162Scf00382g00122 Petunia axillaris HOM05D001825 ORTHO05D002336 1.0e-09 68.2 36 94.4
vmacro07999 Vaccinium macrocarpon HOM05D001825 ORTHO05D002336 1.0e-09 68.2 35 97.1
BcaC06g35196 Brassica carinata HOM05D001825 ORTHO05D002336 1.3e-09 67.8 38 86.8
unitig_26.g10265 Utricularia gibba HOM05D001825 ORTHO05D002336 2.2e-09 67.0 35 94.3
Ah.11g045010 Amaranthus hybridus HOM05D001825 ORTHO05D002336 6.5e-09 65.5 35 91.4
BolC7t42385H Brassica oleracea HOM05D001825 ORTHO05D002336 1.1e-08 64.7 35 91.4
C07p18770 Brassica napus HOM05D001825 ORTHO05D002336 1.5e-08 64.3 34 94.1
CDE01G0229 Ceratophyllum demersum HOM05D001825 ORTHO05D002336 1.5e-08 64.3 33 97.0
ClCG05G022880 Citrullus lanatus HOM05D001825 ORTHO05D002336 1.5e-08 64.3 33 97.0
CBR_g26350 Chara braunii HOM05D001825 ORTHO05D002336 4.2e-08 62.8 34 91.2
SalBow1G3956 Salvia bowleyana HOM05D001825 ORTHO05D002336 9.4e-08 61.6 33 90.9
unitig_749.g13182 Utricularia gibba HOM05D001825 ORTHO05D002336 9.4e-08 61.6 33 90.9
Lj6C763G9 Lonicera japonica HOM05D001825 ORTHO05D002336 4.7e-07 59.3 39 84.6
MBI14_g22129_MAGBIO Magnolia biondii HOM05D001825 ORTHO05D002336 6.1e-07 58.9 30 96.7
MBI16_g23307_MAGBIO Magnolia biondii HOM05D001825 ORTHO05D002336 6.1e-07 58.9 30 96.7
Lalb_Chr10g0099901 Lupinus albus HOM05D001825 ORTHO05D010533 1.8e-06 57.4 35 91.4


User provided reference genes

Program Settings