Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2742 Fragaria x ananassa HOM05D009792 ORTHO05D009073 5.0e-240 833.9 399 100.0
FvH4_4g28520 Fragaria vesca HOM05D009792 ORTHO05D009073 7.0e-125 451.4 312 74.0
FAN12G2506 Fragaria x ananassa HOM05D009792 ORTHO05D009073 1.6e-124 450.3 312 73.7
FAN22G1157 Fragaria x ananassa HOM05D009792 ORTHO05D009073 3.6e-89 332.8 302 61.3
RcHm_v2.0_Chr4g0436521 Rosa chinensis HOM05D009792 ORTHO05D009073 3.6e-89 332.8 309 57.6
FAN07G2591 Fragaria x ananassa HOM05D009792 ORTHO05D009073 1.6e-31 141.4 128 61.7
FvH4_1g12771 Fragaria vesca HOM05D000007 ORTHO05D009073 1.7e-30 137.9 260 36.9
MD11G1124100 Malus domestica HOM05D000007 ORTHO05D009073 1.6e-28 131.3 347 29.4
FAN12G0271 Fragaria x ananassa HOM05D000341 ORTHO05D045552 3.0e-27 127.1 312 36.5
MD03G1110700 Malus domestica HOM05D000007 ORTHO05D009073 3.0e-27 127.1 341 32.0
Prupe.6G093100 Prunus persica HOM05D000007 ORTHO05D009073 1.5e-26 124.8 315 31.7
FAN16G0179 Fragaria x ananassa HOM05D000007 ORTHO05D009073 3.3e-26 123.6 322 31.1
MD11G1124200 Malus domestica HOM05D000007 ORTHO05D009073 3.1e-24 117.1 342 29.2
MD11G1124500 Malus domestica HOM05D009792 ORTHO05D009073 4.2e-21 106.7 371 26.4
FAN22G0037 Fragaria x ananassa HOM05D000341 ORTHO05D001197 7.2e-21 105.9 102 55.9
FAN07G1816 Fragaria x ananassa HOM05D009792 ORTHO05D009073 4.0e-19 100.1 97 55.7
FAN26G1355 Fragaria x ananassa HOM05D009792 ORTHO05D009073 5.2e-19 99.8 283 32.5
FAN17G3095 Fragaria x ananassa HOM05D009792 ORTHO05D001197 1.3e-17 95.1 88 56.8
FvH4_4g28510 Fragaria vesca HOM05D009792 ORTHO05D045552 1.7e-17 94.7 187 38.5
FAN07G0047 Fragaria x ananassa HOM05D009792 ORTHO05D011511 1.8e-16 91.3 82 56.1
FAN22G0536 Fragaria x ananassa HOM05D009792 ORTHO05D009073 1.8e-16 91.3 263 27.4
FAN19G0099 Fragaria x ananassa HOM05D009792 ORTHO05D009073 4.1e-16 90.1 111 45.9
FAN22G1459 Fragaria x ananassa HOM05D009792 ORTHO05D009073 2.0e-15 87.8 213 32.9
FvH4_7g33810 Fragaria vesca HOM05D000007 ORTHO05D009073 7.7e-15 85.9 340 26.2
Prupe.1G333100 Prunus persica HOM05D000007 ORTHO05D009073 7.7e-15 85.9 339 29.2
FAN01G1574 Fragaria x ananassa HOM05D000007 ORTHO05D009073 1.9e-13 81.3 339 26.3
FvH4_4g07100 Fragaria vesca HOM05D000007 ORTHO05D009073 5.5e-13 79.7 298 28.2
QL03p062572 Quercus lobata HOM05D009398 ORTHO05D011511 5.5e-13 79.7 119 39.5
Prupe.1G285200 Prunus persica HOM05D015152 ORTHO05D009073 1.2e-12 78.6 237 30.8
FvH4_4g30181 Fragaria vesca HOM05D021789 ORTHO05D025345 1.0e-11 75.5 95 42.1
FAN12G1824 Fragaria x ananassa HOM05D021789 ORTHO05D025345 1.0e-11 75.5 95 42.1
FAN07G0854 Fragaria x ananassa HOM05D009792 ORTHO05D035474 2.3e-11 74.3 137 35.0
QL03p068470 Quercus lobata HOM05D009398 ORTHO05D011511 3.0e-11 73.9 119 36.1
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 4.0e-11 73.6 198 29.3
QL03p066111 Quercus lobata HOM05D009398 ORTHO05D011511 8.8e-11 72.4 142 36.6
FAN23G1066 Fragaria x ananassa HOM05D009792 ORTHO05D009073 2.0e-10 71.2 137 39.4
FAN28G0070 Fragaria x ananassa HOM05D009792 ORTHO05D009073 2.0e-10 71.2 241 31.1
Prupe.1G285300 Prunus persica HOM05D000007 ORTHO05D009073 9.8e-10 68.9 273 27.5
MD02G1067600 Malus domestica HOM05D009792 ORTHO05D009073 6.3e-09 66.2 240 27.9
Cfa008807 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.1e-08 65.5 104 36.5
Prupe.1G285500 Prunus persica HOM05D000007 ORTHO05D009073 1.1e-08 65.5 280 27.1
HanXRQChr04g0095931 Helianthus annuus HOM05D000171 ORTHO05D009073 2.4e-08 64.3 107 33.6
Actinidia30171 Actinidia chinensis HOM05D000007 ORTHO05D009073 3.1e-08 63.9 97 35.1
QL03p068339 Quercus lobata HOM05D009398 ORTHO05D011511 5.4e-08 63.2 127 33.9
RcHm_v2.0_Chr2g0138411 Rosa chinensis HOM05D000007 ORTHO05D022672 1.2e-07 62.0 137 29.9
Dinv16557 Davidia involucrata HOM05D000007 ORTHO05D009073 1.6e-07 61.6 109 33.0
Haze_11821 Corylus avellana HOM05D009398 ORTHO05D011511 2.7e-07 60.8 104 32.7
HanXRQChr04g0095821 Helianthus annuus HOM05D000171 ORTHO05D009073 2.7e-07 60.8 116 30.2
HanXRQChr02g0049881 Helianthus annuus HOM05D000007 ORTHO05D009073 1.3e-06 58.5 134 26.9
HanXRQChr05g0137821 Helianthus annuus HOM05D000171 ORTHO05D009073 1.3e-06 58.5 139 25.2
FAN17G1591 Fragaria x ananassa HOM05D009792 ORTHO05D000676 1.7e-06 58.2 161 29.8
HanXRQChr02g0047431 Helianthus annuus HOM05D000171 ORTHO05D009073 8.6e-06 55.8 140 25.7
HanXRQChr02g0047451 Helianthus annuus HOM05D000171 ORTHO05D009073 8.6e-06 55.8 140 25.7


User provided reference genes

Program Settings