Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.1e-62 242.3 130 100.0
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 1.0e-61 240.0 130 98.5
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.4e-61 239.6 130 98.5
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 1.3e-59 233.0 130 95.4
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 4.1e-58 228.0 132 94.7
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 5.9e-57 224.2 130 91.5
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 8.6e-56 220.3 130 90.8
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 5.5e-55 217.6 130 88.5
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 7.2e-55 217.2 128 88.3
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 1.0e-53 213.4 130 86.2
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 7.5e-52 207.2 128 82.8
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 7.5e-52 207.2 130 83.8
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 7.5e-52 207.2 128 84.4
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 7.5e-52 207.2 130 83.8
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.3e-51 206.5 130 81.5
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 1.3e-51 206.5 130 81.5
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 2.2e-51 205.7 130 83.1
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 2.8e-51 205.3 128 82.8
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 2.8e-51 205.3 130 83.8
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 2.8e-51 205.3 130 84.6
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 3.7e-51 204.9 128 83.6
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.4e-50 203.0 130 80.8
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 1.4e-50 203.0 128 81.2
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 3.1e-50 201.8 128 80.5
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 4.1e-50 201.4 128 80.5
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 5.4e-50 201.1 130 80.8
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 5.4e-50 201.1 130 80.8
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.2e-49 199.9 130 79.2
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.2e-49 199.9 130 79.2
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.2e-49 199.9 130 80.0
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.6e-49 199.5 128 82.0
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.0e-49 199.1 128 81.2
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 3.5e-49 198.4 130 80.0
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 4.5e-49 198.0 122 84.4
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 4.5e-49 198.0 130 81.5
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 4.5e-49 198.0 127 79.5
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 5.9e-49 197.6 128 79.7
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 5.9e-49 197.6 128 81.2
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 1.3e-48 196.4 130 76.9
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 1.3e-48 196.4 128 79.7
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 79.7
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 1.7e-48 196.1 130 78.5
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 2.3e-48 195.7 128 79.7
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 2.3e-48 195.7 130 75.4
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 2.9e-48 195.3 128 78.9
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 3.9e-48 194.9 128 77.3
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 5.0e-48 194.5 130 77.7
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 5.0e-48 194.5 130 79.2
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 8.6e-48 193.7 128 76.6
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.1e-47 193.4 128 79.7
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.1e-47 193.4 128 79.7
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 1.9e-47 192.6 128 77.3
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 2.5e-47 192.2 130 76.2
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.5e-47 192.2 130 76.2
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 4.3e-47 191.4 130 76.9
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 5.6e-47 191.0 128 76.6
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 7.3e-47 190.7 126 77.8
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 7.3e-47 190.7 126 77.8
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 1.2e-46 189.9 130 79.2
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.1e-46 189.1 127 76.4
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.8e-46 188.7 127 75.6
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 3.6e-46 188.3 128 75.0
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 3.6e-46 188.3 128 78.1
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 6.1e-46 187.6 127 74.8
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 6.1e-46 187.6 130 73.8
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 1.0e-45 186.8 130 74.6
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 1.0e-45 186.8 126 76.2
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 2.3e-45 185.7 130 73.1
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 4.0e-45 184.9 112 84.8
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 5.2e-45 184.5 134 75.4
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 1.2e-44 183.3 136 70.6
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 1.2e-44 183.3 128 75.8
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 1.5e-44 183.0 130 71.5
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 2.0e-44 182.6 119 78.2
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 4.4e-44 181.4 130 70.8
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 5.8e-44 181.0 130 70.8
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.3e-43 179.9 127 74.0
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 1.7e-43 179.5 128 72.7
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 1.7e-43 179.5 128 71.1
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 2.2e-43 179.1 171 59.6
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 2.2e-43 179.1 121 76.9
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 4.9e-43 177.9 128 70.3
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 4.9e-43 177.9 131 76.3
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 1.1e-42 176.8 128 69.5
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 1.4e-42 176.4 126 69.8
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 4.1e-42 174.9 122 77.0
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 5.4e-42 174.5 128 68.0
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 2.0e-41 172.6 128 71.1
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 3.5e-41 171.8 128 70.3
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 3.5e-41 171.8 128 70.3
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 7.8e-41 170.6 120 71.7
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 2.5e-39 165.6 119 72.3
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 9.5e-39 163.7 125 72.0
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 8.9e-37 157.1 98 79.6
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 1.5e-36 156.4 103 78.6
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 1.3e-35 153.3 128 60.2
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.7e-35 152.9 116 70.7
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 2.9e-35 152.1 185 51.9
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.4e-34 149.8 104 76.0
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 1.9e-34 149.4 128 58.6
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 1.0e-32 143.7 103 68.9
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 6.6e-32 141.0 96 76.0
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 1.1e-31 140.2 101 74.3
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 1.6e-30 136.3 92 77.2
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 6.8e-29 131.0 92 73.9
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 2.9e-27 125.6 94 71.3
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 2.9e-27 125.6 120 55.8
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 9.2e-26 120.6 92 70.7
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 4.6e-25 118.2 93 68.8
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 4.3e-23 111.7 99 52.5
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 7.3e-23 110.9 72 77.8
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 1.8e-21 106.3 62 85.5
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 4.0e-21 105.1 108 56.5
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 6.8e-21 104.4 66 81.8
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 9.9e-20 100.5 62 79.0
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 2.9e-19 99.0 62 79.0
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 8.4e-19 97.4 63 71.4
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 3.0e-16 89.0 64 68.8
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 6.6e-16 87.8 64 68.8
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 8.7e-16 87.4 62 67.7
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 7.3e-15 84.3 57 77.2
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 6.2e-14 81.3 117 36.8
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 2.2e-11 72.8 115 33.9
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 1.0e-08 63.9 61 49.2
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 1.7e-08 63.2 38 81.6
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 8.7e-08 60.8 56 62.5


User provided reference genes

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