Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2592 Fragaria x ananassa HOM05D002472 ORTHO05D002827 5.0e-27 123.6 60 100.0
FvH4_4g09430 Fragaria vesca HOM05D002472 ORTHO05D002827 1.2e-25 119.0 60 96.7
FAN12G4298 Fragaria x ananassa HOM05D002472 ORTHO05D002827 1.2e-25 119.0 60 96.7
FAN17G2682 Fragaria x ananassa HOM05D002472 ORTHO05D002827 1.0e-24 115.9 60 95.0
HanXRQChr10g0295211 Helianthus annuus HOM05D002472 ORTHO05D002827 9.5e-10 66.2 45 64.4
CANSAT54G0369 Cannabis sativa HOM05D002472 ORTHO05D002827 1.2e-09 65.9 45 68.9
RcHm_v2.0_Chr3g0452121 Rosa chinensis HOM05D002472 ORTHO05D002827 1.2e-09 65.9 45 68.9
Aqoxy6G02478 Aquilegia oxysepala HOM05D002472 ORTHO05D002827 1.6e-09 65.5 48 64.6
RcHm_v2.0_Chr3g0452011 Rosa chinensis HOM05D002472 ORTHO05D002827 1.6e-09 65.5 49 61.2
TPR.G6975 Trifolium pratense HOM05D002472 ORTHO05D002827 2.1e-09 65.1 46 65.2
Cc02_g31610 Coffea canephora HOM05D002472 ORTHO05D002827 2.8e-09 64.7 48 64.6
ATR0737G105 Amborella trichopoda HOM05D002472 ORTHO05D002827 3.6e-09 64.3 48 62.5
MD12G1236800 Malus domestica HOM05D002472 ORTHO05D002827 3.6e-09 64.3 45 66.7
ClCG06G009090 Citrullus lanatus HOM05D002472 ORTHO05D002827 4.7e-09 63.9 45 66.7
MELO3C024679.2 Cucumis melo HOM05D002472 ORTHO05D002827 4.7e-09 63.9 45 66.7
CsaV3_1G045680 Cucumis sativus L. HOM05D002472 ORTHO05D002827 4.7e-09 63.9 45 66.7
FAN09G1127 Fragaria x ananassa HOM05D002472 ORTHO05D002827 4.7e-09 63.9 45 62.2
Glyma.03G245400 Glycine max HOM05D002472 ORTHO05D002827 4.7e-09 63.9 45 66.7
Gohir.A11G255600 Gossypium hirsutum HOM05D002472 ORTHO05D002827 4.7e-09 63.9 45 66.7
Gohir.D11G265400 Gossypium hirsutum HOM05D002472 ORTHO05D002827 4.7e-09 63.9 45 66.7
Gorai.007G285400 Gossypium raimondii HOM05D002472 ORTHO05D002827 4.7e-09 63.9 45 66.7
HanXRQChr14g0446141 Helianthus annuus HOM05D002472 ORTHO05D002827 4.7e-09 63.9 45 66.7
MD04G1220400 Malus domestica HOM05D002472 ORTHO05D002827 4.7e-09 63.9 45 66.7
Prupe.6G339400 Prunus persica HOM05D002472 ORTHO05D002827 4.7e-09 63.9 45 68.9
CiPaw.07G006900 Carya illinoinensis HOM05D002472 ORTHO05D002827 6.2e-09 63.5 45 66.7
CiPaw.08G179100 Carya illinoinensis HOM05D002472 ORTHO05D002827 6.2e-09 63.5 45 66.7
Dinv17758 Davidia involucrata HOM05D002472 ORTHO05D002827 6.2e-09 63.5 45 66.7
Eucgr.H04386 Eucalyptus grandis HOM05D002472 ORTHO05D002827 6.2e-09 63.5 45 66.7
Medtr8g465010 Medicago truncatula HOM05D002472 ORTHO05D002827 6.2e-09 63.5 45 64.4
PGR004G0868 Punica granatum HOM05D002472 ORTHO05D002827 6.2e-09 63.5 45 66.7
QL03p024106 Quercus lobata HOM05D002472 ORTHO05D002827 6.2e-09 63.5 45 66.7
QL03p024181 Quercus lobata HOM05D002472 ORTHO05D002827 6.2e-09 63.5 45 66.7
RcHm_v2.0_Chr3g0452111 Rosa chinensis HOM05D002472 ORTHO05D002827 6.2e-09 63.5 48 64.6
SGA_v2.0_scaffold196G40956 Striga asiatica HOM05D002472 ORTHO05D002827 6.2e-09 63.5 45 66.7
TWI36G0925 Tripterygium wilfordii HOM05D002472 ORTHO05D002827 6.2e-09 63.5 45 66.7
Ciclev10001390m.g Citrus clementina HOM05D002472 ORTHO05D002827 8.1e-09 63.2 45 64.4
Migut.N01927 Erythranthe guttata HOM05D002472 ORTHO05D002827 8.1e-09 63.2 45 64.4
SalBow3G1967 Salvia bowleyana HOM05D002472 ORTHO05D002827 8.1e-09 63.2 45 64.4
arahy.Tifrunner.gnm1.ann1.PGP8Y3 Arachis hypogaea HOM05D002472 ORTHO05D002827 1.1e-08 62.8 45 64.4
Cfa006468 Carpinus fangiana HOM05D002472 ORTHO05D002827 1.1e-08 62.8 45 64.4
Ca_09406_v3 Cicer arietinum L. HOM05D002472 ORTHO05D002827 1.1e-08 62.8 45 64.4
COL.COLO4_15276 Corchorus olitorius HOM05D002472 ORTHO05D002827 1.1e-08 62.8 45 64.4
Haze_04324 Corylus avellana HOM05D002472 ORTHO05D002827 1.1e-08 62.8 45 64.4
Glyma.19G242800 Glycine max HOM05D002472 ORTHO05D002827 1.1e-08 62.8 45 64.4
Medtr7g114660 Medicago truncatula HOM05D002472 ORTHO05D002827 1.1e-08 62.8 45 64.4
Psat3g008240 Pisum sativum HOM05D002472 ORTHO05D002827 1.1e-08 62.8 45 64.4
Thecc.05G289000 Theobroma cacao HOM05D002472 ORTHO05D002827 1.1e-08 62.8 45 64.4
CDE10G0348 Ceratophyllum demersum HOM05D002472 ORTHO05D002827 1.4e-08 62.4 45 64.4
CDE10G1257 Ceratophyllum demersum HOM05D002472 ORTHO05D002827 1.4e-08 62.4 45 64.4
FAN08G0971 Fragaria x ananassa HOM05D002472 ORTHO05D002827 1.4e-08 62.4 46 63.0
Manes.09G156400 Manihot esculenta HOM05D002472 ORTHO05D002827 1.4e-08 62.4 45 64.4
Peaxi162Scf00404g00027 Petunia axillaris HOM05D002472 ORTHO05D002827 1.4e-08 62.4 47 61.7
Sed0022641 Sechium edule HOM05D002472 ORTHO05D002827 1.4e-08 62.4 45 64.4
VMungo0540G0191 Vigna mungo HOM05D002472 ORTHO05D002827 1.4e-08 62.4 45 64.4
Lj1g0020326 Lotus japonicus HOM05D002472 ORTHO05D002827 1.8e-08 62.0 45 64.4
Solyc01g097860.4 Solanum lycopersicum HOM05D002472 ORTHO05D002827 1.8e-08 62.0 45 62.2
Sopen01g041460 Solanum pennellii HOM05D002472 ORTHO05D002827 1.8e-08 62.0 45 62.2
THA.LOC104821125 Tarenaya hassleriana HOM05D002472 ORTHO05D002827 1.8e-08 62.0 45 64.4
Atru.chr2.723 Acer truncatum HOM05D002472 ORTHO05D002827 2.3e-08 61.6 45 64.4
BcaC06g31949 Brassica carinata HOM05D002472 ORTHO05D002827 2.3e-08 61.6 45 62.2
Dinv11559 Davidia involucrata HOM05D002472 ORTHO05D002827 2.3e-08 61.6 45 64.4
Hma1.2p1_0332F.1_g127690 Hydrangea macrophylla HOM05D002472 ORTHO05D002827 2.3e-08 61.6 45 64.4
SpUn0001_0400 Schrenkiella parvula HOM05D002472 ORTHO05D002827 2.3e-08 61.6 45 64.4
GSVIVG01021855001 Vitis vinifera HOM05D002472 ORTHO05D002827 2.3e-08 61.6 45 64.4
Actinidia30924 Actinidia chinensis HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 62.2
BcaC09g50560 Brassica carinata HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 62.2
A01p18990 Brassica napus HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 62.2
BolC1t02342H Brassica oleracea HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 62.2
BraA01t01842Z Brassica rapa HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 62.2
CAN.G134.169 Capsicum annuum HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 62.2
FAN02G1997 Fragaria x ananassa HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 62.2
FAN05G1585 Fragaria x ananassa HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 62.2
FAN05G3932 Fragaria x ananassa HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 62.2
FAN09G3673 Fragaria x ananassa HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 62.2
FAN13G1811 Fragaria x ananassa HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 62.2
FAN14G0010 Fragaria x ananassa HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 62.2
HanXRQChr10g0295231 Helianthus annuus HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 60.0
Lalb_Chr18g0045101 Lupinus albus HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 62.2
Medtr8g031500 Medicago truncatula HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 62.2
Nn4g26312 Nelumbo nucifera HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 64.4
PSO210G6821 Papaver somniferum HOM05D002472 ORTHO05D002827 3.1e-08 61.2 48 56.2
PSO832G0752 Papaver somniferum HOM05D002472 ORTHO05D002827 3.1e-08 61.2 48 56.2
Sabra05G0044700 Salix brachista HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 64.4
Sabra15G0050500 Salix brachista HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 64.4
Sabra15G0074400 Salix brachista HOM05D002472 ORTHO05D002827 3.1e-08 61.2 45 64.4
Actinidia05762 Actinidia chinensis HOM05D002472 ORTHO05D002827 4.0e-08 60.8 45 62.2
Aa31LG2G12270 Aethionema arabicum HOM05D002472 ORTHO05D002827 4.0e-08 60.8 45 62.2
C01p23920 Brassica napus HOM05D002472 ORTHO05D002827 4.0e-08 60.8 45 62.2
CSS0020760 Camellia sinensis var. sinensis HOM05D002472 ORTHO05D002827 4.0e-08 60.8 45 62.2
AUR62000974 Chenopodium quinoa HOM05D002472 ORTHO05D002827 4.0e-08 60.8 45 62.2
Nitab4.5_0002361g0140 Nicotiana tabacum HOM05D002472 ORTHO05D002827 4.0e-08 60.8 45 60.0
Nitab4.5_0002840g0020 Nicotiana tabacum HOM05D002472 ORTHO05D002827 4.0e-08 60.8 45 60.0
Oeu021635.2 Olea europaea HOM05D002472 ORTHO05D002827 4.0e-08 60.8 45 64.4
Os03g0695500 Oryza sativa ssp. japonica HOM05D002472 ORTHO05D002827 4.0e-08 60.8 45 64.4
Rhsim07G0175700 Rhododendron simsii HOM05D002472 ORTHO05D002827 4.0e-08 60.8 45 62.2
RcHm_v2.0_Chr3g0452001 Rosa chinensis HOM05D002472 ORTHO05D002827 4.0e-08 60.8 43 65.1
PGSC0003DMG400022472 Solanum tuberosum HOM05D002472 ORTHO05D002827 4.0e-08 60.8 45 60.0
unitig_899.g15577 Utricularia gibba HOM05D002472 ORTHO05D002827 4.0e-08 60.8 45 64.4
vmacro05069 Vaccinium macrocarpon HOM05D002472 ORTHO05D002827 4.0e-08 60.8 45 62.2
Aqoxy5G00475 Aquilegia oxysepala HOM05D002472 ORTHO05D002827 5.2e-08 60.5 45 62.2
Aqoxy6G02480 Aquilegia oxysepala HOM05D002472 ORTHO05D002827 5.2e-08 60.5 45 66.7
Carub.0002s0917 Capsella rubella HOM05D002472 ORTHO05D002827 5.2e-08 60.5 46 63.0
CDE10G0574 Ceratophyllum demersum HOM05D002472 ORTHO05D002827 5.2e-08 60.5 45 62.2
Zm00001eb053770 Zea mays HOM05D002472 ORTHO05D002827 5.2e-08 60.5 45 62.2
Cpa.g.sc264.12 Carica papaya HOM05D002472 ORTHO05D002827 6.8e-08 60.1 45 60.0
ECA238G2290 Erigeron canadensis HOM05D002472 ORTHO05D001990 6.8e-08 60.1 45 62.2
FvH4_6g03490 Fragaria vesca HOM05D002472 ORTHO05D002827 6.8e-08 60.1 46 58.7
FAN05G2994 Fragaria x ananassa HOM05D002472 ORTHO05D002827 6.8e-08 60.1 46 58.7
FAN05G4815 Fragaria x ananassa HOM05D002472 ORTHO05D002827 6.8e-08 60.1 46 58.7
FAN09G1451 Fragaria x ananassa HOM05D002472 ORTHO05D002827 6.8e-08 60.1 46 58.7
FAN13G0100 Fragaria x ananassa HOM05D002472 ORTHO05D002827 6.8e-08 60.1 43 65.1
Lalb_Chr15g0076881 Lupinus albus HOM05D002472 ORTHO05D002827 6.8e-08 60.1 45 60.0
Manes.08G127900 Manihot esculenta HOM05D002472 ORTHO05D002827 6.8e-08 60.1 45 62.2
Sed0025137 Sechium edule HOM05D002472 ORTHO05D002827 6.8e-08 60.1 45 60.0
Zm00001eb217000 Zea mays HOM05D002472 ORTHO05D002827 6.8e-08 60.1 45 62.2
Duzib128G0462 Durio zibethinus HOM05D002472 ORTHO05D002827 8.9e-08 59.7 45 62.2
Gohir.D11G313500 Gossypium hirsutum HOM05D002472 ORTHO05D002827 8.9e-08 59.7 42 64.3
Gorai.007G344700 Gossypium raimondii HOM05D002472 ORTHO05D002827 8.9e-08 59.7 42 64.3
TAR142G0001 Trochodendron aralioides HOM05D002472 ORTHO05D002827 8.9e-08 59.7 45 62.2
HPP92_023569 Vanilla planifolia HOM05D002472 ORTHO05D002827 8.9e-08 59.7 45 62.2
EL10Ac4g09186 Beta vulgaris HOM05D002472 ORTHO05D002827 1.2e-07 59.3 45 60.0
ECA238G3450 Erigeron canadensis HOM05D002472 ORTHO05D002827 1.2e-07 59.3 46 58.7
ECA238G3644 Erigeron canadensis HOM05D002472 ORTHO05D002827 1.2e-07 59.3 45 62.2
FvH4_6g03520 Fragaria vesca HOM05D002472 ORTHO05D002827 1.2e-07 59.3 69 44.9
FAN09G3215 Fragaria x ananassa HOM05D002472 ORTHO05D002827 1.2e-07 59.3 69 44.9
FAN14G3949 Fragaria x ananassa HOM05D002472 ORTHO05D002827 1.2e-07 59.3 69 44.9
FAN18G3852 Fragaria x ananassa HOM05D002472 ORTHO05D002827 1.2e-07 59.3 46 60.9
HanXRQChr10g0295201 Helianthus annuus HOM05D002472 ORTHO05D002827 1.2e-07 59.3 44 61.4
Potri.005G049500 Populus trichocarpa HOM05D002472 ORTHO05D002827 1.2e-07 59.3 45 62.2
AUR62004992 Chenopodium quinoa HOM05D002472 ORTHO05D002827 1.5e-07 58.9 45 60.0
Carub.0002s0913 Capsella rubella HOM05D002472 ORTHO05D002827 2.0e-07 58.5 45 60.0
Carub.0002s0919 Capsella rubella HOM05D002472 ORTHO05D002827 2.0e-07 58.5 45 62.2
Migut.N01928 Erythranthe guttata HOM05D002472 ORTHO05D002827 2.0e-07 58.5 45 57.8
FvH4_5g29750 Fragaria vesca HOM05D002472 ORTHO05D002827 2.0e-07 58.5 46 60.9
HanXRQChr10g0295161 Helianthus annuus HOM05D002472 ORTHO05D002827 2.0e-07 58.5 45 62.2
Lsat_1_v5_gn_2_65020 Lactuca sativa HOM05D002472 ORTHO05D002827 2.0e-07 58.5 45 57.8
AL1G64960 Arabidopsis lyrata HOM05D002472 ORTHO05D002827 2.6e-07 58.2 45 62.2
AT1G54520 Arabidopsis thaliana HOM05D002472 ORTHO05D002827 2.6e-07 58.2 45 62.2
COL.COLO4_15282 Corchorus olitorius HOM05D002472 ORTHO05D002827 2.6e-07 58.2 45 57.8
Lj7A486G69 Lonicera japonica HOM05D002472 ORTHO05D002827 2.6e-07 58.2 45 62.2
COL.COLO4_15277 Corchorus olitorius HOM05D002472 ORTHO05D002827 3.4e-07 57.8 45 57.8
DCAR_006611 Daucus carota HOM05D002472 ORTHO05D002827 3.4e-07 57.8 45 62.2
FAN05G4665 Fragaria x ananassa HOM05D002472 ORTHO05D002827 3.4e-07 57.8 68 45.6
Hund22109 Selenicereus undatus HOM05D002472 ORTHO05D002827 3.4e-07 57.8 45 57.8
FAN05G1889 Fragaria x ananassa HOM05D002472 ORTHO05D002827 4.4e-07 57.4 68 44.1
Gohir.A11G298700 Gossypium hirsutum HOM05D002472 ORTHO05D002827 4.4e-07 57.4 42 64.3
COL.COLO4_15281 Corchorus olitorius HOM05D002472 ORTHO05D002827 5.8e-07 57.0 45 60.0
Migut.N01932 Erythranthe guttata HOM05D002472 ORTHO05D002827 5.8e-07 57.0 46 58.7
Migut.O00598 Erythranthe guttata HOM05D002472 ORTHO05D002827 5.8e-07 57.0 46 58.7
PSO210G6908 Papaver somniferum HOM05D002472 ORTHO05D002827 5.8e-07 57.0 45 60.0
Pp3c9_18900 Physcomitrium patens HOM05D002472 ORTHO05D002827 5.8e-07 57.0 43 62.8
CARHR055610 Cardamine hirsuta HOM05D002472 ORTHO05D002827 7.6e-07 56.6 45 60.0
Cc02_g31530 Coffea canephora HOM05D002472 ORTHO05D002827 1.3e-06 55.8 48 56.2
COL.COLO4_15279 Corchorus olitorius HOM05D002472 ORTHO05D002827 1.3e-06 55.8 45 57.8
Lsat_1_v5_gn_2_65180 Lactuca sativa HOM05D002472 ORTHO05D002827 1.3e-06 55.8 45 53.3
SMO337G0037 Selaginella moellendorffii HOM05D002472 ORTHO05D002827 1.3e-06 55.8 45 57.8
AagrBONN_evm.TU.Sc2ySwM_368.470 Anthoceros agrestis HOM05D002472 ORTHO05D002827 4.9e-06 53.9 43 55.8
PSO832G1625 Papaver somniferum HOM05D002472 ORTHO05D002827 4.9e-06 53.9 45 57.8
FAN14G3559 Fragaria x ananassa HOM05D002472 ORTHO05D002827 6.4e-06 53.5 49 51.0
QL06p002607 Quercus lobata HOM05D002472 ORTHO05D002827 6.4e-06 53.5 42 61.9
Pp3c26_130 Physcomitrium patens HOM05D002472 ORTHO05D002827 8.4e-06 53.1 43 58.1


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