Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2530 Fragaria x ananassa HOM05D011010 ORTHO05D012519 1.8e-139 499.2 244 100.0
FvH4_3g35672 Fragaria vesca HOM05D011010 ORTHO05D012519 2.1e-127 459.1 243 92.6
FAN12G0563 Fragaria x ananassa HOM05D011010 ORTHO05D012519 5.3e-83 311.6 243 69.1
FvH4_3g23932 Fragaria vesca HOM05D011010 ORTHO05D012519 5.0e-81 305.1 240 61.2
FAN05G2188 Fragaria x ananassa HOM05D003092 ORTHO05D003977 3.5e-58 229.2 184 60.3
FAN11G2564 Fragaria x ananassa HOM05D011010 ORTHO05D012519 2.3e-54 216.5 119 91.6
FvH4_4g18641 Fragaria vesca HOM05D011010 ORTHO05D012519 2.0e-53 213.4 244 46.3
FAN12G1912 Fragaria x ananassa HOM05D011010 ORTHO05D012519 1.1e-51 207.6 244 45.9
FAN04G2130 Fragaria x ananassa HOM05D004096 ORTHO05D012519 1.3e-49 200.7 116 91.4
RcHm_v2.0_Chr6g0298551 Rosa chinensis HOM05D011010 ORTHO05D012519 2.3e-46 189.9 245 42.4
FAN17G1074 Fragaria x ananassa HOM05D011010 ORTHO05D012519 4.2e-40 169.1 240 42.1
FAN21G1238 Fragaria x ananassa HOM05D011010 ORTHO05D012519 1.4e-38 164.1 112 63.4
RcHm_v2.0_Chr3g0494851 Rosa chinensis HOM05D011010 ORTHO05D012519 6.8e-38 161.8 121 57.9
MD10G1235600 Malus domestica HOM05D011010 ORTHO05D012519 1.8e-30 137.1 141 44.0
FvH4_7g17721 Fragaria vesca HOM05D011010 ORTHO05D012519 1.3e-25 120.9 132 51.5
RcHm_v2.0_Chr4g0406761 Rosa chinensis HOM05D011010 ORTHO05D012519 2.0e-21 107.1 101 49.5
FAN01G1693 Fragaria x ananassa HOM05D011010 ORTHO05D012519 7.0e-19 98.6 107 45.8
FAN03G2787 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.8e-13 79.0 202 29.7
FAN02G0977 Fragaria x ananassa HOM05D011010 ORTHO05D012519 7.5e-13 78.6 74 56.8
FvH4_1g14871 Fragaria vesca HOM05D003861 ORTHO05D003172 2.2e-12 77.0 203 30.0
RcHm_v2.0_Chr7g0200361 Rosa chinensis HOM05D003861 ORTHO05D003172 2.9e-12 76.6 224 22.8
FAN14G4213 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.4e-12 75.5 241 28.2
FAN12G4080 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.3e-12 75.1 252 28.6
RcHm_v2.0_Chr6g0254691 Rosa chinensis HOM05D006804 ORTHO05D009450 8.3e-12 75.1 207 28.5
FvH4_1g04631 Fragaria vesca HOM05D003861 ORTHO05D003172 1.9e-11 73.9 204 28.4
FvH4_4g12252 Fragaria vesca HOM05D003861 ORTHO05D003172 1.9e-11 73.9 200 28.5
FAN07G2158 Fragaria x ananassa HOM05D006804 ORTHO05D009450 5.4e-11 72.4 203 28.1
FAN26G2443 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.4e-11 72.4 189 28.0
FAN05G4779 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.1e-11 72.0 193 30.1
FAN24G3086 Fragaria x ananassa HOM05D006804 ORTHO05D009450 7.1e-11 72.0 203 28.1
FAN09G4482 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.2e-11 71.6 252 28.2
Aqoxy5G02702 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 1.2e-10 71.2 211 25.1
FAN12G3947 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.2e-10 71.2 252 28.2
FAN14G4127 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-10 70.9 187 30.5
Prupe.4G233800 Prunus persica HOM05D004516 ORTHO05D005194 1.6e-10 70.9 209 28.7
FAN22G0249 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.1e-10 70.5 252 28.2
FAN02G1809 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.5e-10 69.7 252 28.2
FAN26G1802 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.0e-10 68.9 178 29.8
FAN02G3772 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.0e-09 68.2 204 28.4
FAN03G2119 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.0e-09 68.2 234 24.8
FAN09G3680 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.3e-09 67.8 251 27.5
TWI38G0149 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 3.9e-09 66.2 129 30.2
FAN18G2686 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.1e-09 65.9 234 24.4
FAN09G1939 Fragaria x ananassa HOM05D006804 ORTHO05D009450 6.6e-09 65.5 251 27.5
FAN15G1075 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.6e-09 65.1 165 27.3
FAN10G0516 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.1e-08 64.7 252 27.4
FAN06G3254 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-08 64.3 186 30.6
FAN17G2131 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-08 64.3 260 28.1
FAN23G2374 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-08 64.3 260 28.1
FAN24G1232 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-08 64.3 260 28.1
FAN26G1201 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-08 64.3 260 28.1
FAN06G0466 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.9e-08 63.9 260 28.1
FAN20G1987 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.9e-08 63.9 209 27.8
FAN20G0680 Fragaria x ananassa HOM05D006804 ORTHO05D009450 2.5e-08 63.5 251 27.1
FAN21G1214 Fragaria x ananassa HOM05D006804 ORTHO05D009450 2.5e-08 63.5 251 27.1
FAN03G0767 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.3e-08 63.2 260 28.1
FAN14G3153 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.3e-08 63.2 230 26.5
FAN05G5482 Fragaria x ananassa HOM05D006804 ORTHO05D009450 4.3e-08 62.8 249 26.5
FAN27G0922 Fragaria x ananassa HOM05D006804 ORTHO05D009450 4.3e-08 62.8 249 26.5
RcHm_v2.0_Chr4g0392971 Rosa chinensis HOM05D004516 ORTHO05D005194 5.6e-08 62.4 242 24.8
TWI34G0394 Tripterygium wilfordii HOM05D014549 ORTHO05D000401 9.5e-08 61.6 129 29.5
BcaC01g02275 Brassica carinata HOM05D007743 ORTHO05D004645 1.2e-07 61.2 152 28.9
FAN04G1565 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.6e-07 59.7 252 27.8
TWI74G1447 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 3.6e-07 59.7 130 28.5
TWI23G0768 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 6.2e-07 58.9 129 29.5
FAN08G1451 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.1e-07 58.5 227 27.8
BcaB04g19609 Brassica carinata HOM05D007743 ORTHO05D004645 1.1e-06 58.2 139 28.8
Medtr0867s0010 Medicago truncatula HOM05D001576 ORTHO05D000401 1.1e-06 58.2 248 25.4
FAN25G1581 Fragaria x ananassa HOM05D006804 ORTHO05D009450 1.8e-06 57.4 252 26.6
FAN27G1279 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.8e-06 57.4 191 23.6
BcaB06g28792 Brassica carinata HOM05D007743 ORTHO05D004645 3.1e-06 56.6 139 28.8
FAN17G2808 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.1e-06 56.6 100 31.0
MD08G1042000 Malus domestica HOM05D000529 ORTHO05D012519 3.1e-06 56.6 145 34.5
TWI23G0178 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 3.1e-06 56.6 129 27.9
TWI56G0559 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 3.1e-06 56.6 129 27.9
CARHR258700 Cardamine hirsuta HOM05D007592 ORTHO05D004645 4.0e-06 56.2 260 25.8
TWI56G0638 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 4.0e-06 56.2 129 27.9
BcaB02g10737 Brassica carinata HOM05D007743 ORTHO05D004645 5.2e-06 55.8 138 29.0
FAN19G1677 Fragaria x ananassa HOM05D008328 ORTHO05D003172 5.2e-06 55.8 221 23.1
MD08G1109500 Malus domestica HOM05D011010 ORTHO05D012519 5.2e-06 55.8 58 41.4
FAN11G2926 Fragaria x ananassa HOM05D004516 ORTHO05D005194 8.9e-06 55.1 203 28.1


User provided reference genes

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