Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 7.3e-181 637.1 324 100.0
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 3.9e-174 614.8 324 96.9
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 3.9e-174 614.8 324 96.9
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 1.1e-152 543.5 313 87.9
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 3.9e-126 455.3 313 74.1
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 2.5e-120 436.0 310 70.6
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 3.0e-118 429.1 304 70.7
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 5.2e-118 428.3 304 70.1
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 3.8e-113 412.1 305 68.9
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 4.2e-112 408.7 215 98.1
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 9.4e-112 407.5 306 66.3
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 3.0e-110 402.5 305 66.9
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 1.1e-107 394.0 311 64.3
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 2.7e-106 389.4 305 64.3
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 2.1e-103 379.8 294 63.9
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 2.7e-103 379.4 305 63.3
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 4.7e-103 378.6 329 60.2
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 6.1e-103 378.3 305 63.3
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 1.8e-102 376.7 304 61.2
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 1.8e-102 376.7 301 62.5
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 3.0e-102 375.9 302 64.2
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 5.2e-102 375.2 300 63.3
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 4.4e-101 372.1 304 60.5
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 5.7e-101 371.7 306 61.4
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 9.8e-101 370.9 305 61.3
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 1.7e-100 370.2 300 62.7
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 3.7e-100 369.0 305 62.0
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 3.7e-100 369.0 304 60.5
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 3.1e-99 365.9 301 61.1
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 7.0e-99 364.8 305 60.0
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 2.0e-98 363.2 300 63.3
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 4.5e-98 362.1 306 60.1
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 1.3e-97 360.5 304 59.9
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 1.3e-97 360.5 297 62.3
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 1.7e-97 360.1 304 59.2
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 2.3e-97 359.8 304 59.9
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 3.8e-97 359.0 308 60.7
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 6.6e-97 358.2 304 58.6
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 1.1e-96 357.5 304 60.5
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 2.8e-95 352.8 304 58.9
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 6.1e-95 351.7 306 59.2
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 8.0e-95 351.3 304 59.5
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 1.0e-94 350.9 305 59.0
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 1.0e-94 350.9 362 51.7
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 1.0e-94 350.9 305 59.7
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 3.0e-94 349.4 308 58.4
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 5.2e-94 348.6 307 57.3
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 8.9e-94 347.8 326 55.5
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 1.2e-93 347.4 305 59.3
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 7.5e-93 344.7 305 57.7
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 2.2e-92 343.2 305 56.1
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 8.3e-92 341.3 304 58.6
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 4.1e-91 339.0 305 57.4
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 4.1e-91 339.0 305 57.4
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 7.0e-91 338.2 303 57.4
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 1.6e-90 337.0 304 58.9
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 7.8e-90 334.7 306 55.9
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 1.0e-89 334.3 307 56.0
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 2.9e-89 332.8 306 55.6
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 3.9e-89 332.4 299 55.9
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 5.0e-89 332.0 304 56.9
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 6.6e-89 331.6 304 56.6
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 1.5e-88 330.5 304 55.3
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 1.9e-88 330.1 314 54.5
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.9e-88 330.1 305 53.1
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 1.9e-88 330.1 301 54.8
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 3.3e-88 329.3 304 56.2
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 4.3e-88 328.9 318 54.4
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 7.3e-88 328.2 314 54.5
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 9.5e-88 327.8 312 56.7
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 2.8e-87 326.2 304 55.6
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 6.1e-87 325.1 314 53.5
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 6.1e-87 325.1 308 54.9
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 1.0e-86 324.3 304 54.6
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 1.4e-86 323.9 304 54.9
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 1.4e-86 323.9 304 54.6
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 1.8e-86 323.6 293 57.7
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 1.8e-86 323.6 308 57.1
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 3.1e-86 322.8 314 52.5
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 2.0e-85 320.1 324 53.7
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 2.9e-84 316.2 301 54.2
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 1.1e-83 314.3 309 54.4
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 4.1e-83 312.4 300 52.3
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 1.2e-82 310.8 304 51.0
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 5.0e-81 305.4 309 53.4
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 2.5e-80 303.1 301 52.5
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 3.3e-80 302.8 302 50.0
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 9.5e-80 301.2 305 51.1
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 1.2e-79 300.8 304 50.0
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 4.7e-79 298.9 314 50.6
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 4.7e-79 298.9 281 53.0
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 8.0e-79 298.1 314 50.6
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 1.8e-78 297.0 301 51.2
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 2.2e-76 290.0 304 50.7
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 3.0e-73 279.6 304 50.0
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 2.2e-68 263.5 306 47.4
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 6.0e-66 255.4 271 49.1
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 8.6e-65 251.5 210 61.9
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 1.2e-63 247.7 239 54.4
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 1.8e-62 243.8 205 62.0
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 2.2e-60 236.9 304 46.7
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 6.6e-57 225.3 271 47.6
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 2.8e-55 219.9 171 66.7
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 4.5e-45 186.0 252 40.1
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 2.4e-38 163.7 194 49.5
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 2.0e-37 160.6 311 33.1
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 2.3e-33 147.1 216 39.8
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 3.9e-33 146.4 105 63.8
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 5.3e-30 136.0 120 58.3
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 1.3e-25 121.3 120 50.8
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 1.1e-24 118.2 118 49.2
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 4.3e-24 116.3 139 44.6
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 5.7e-24 115.9 139 43.9
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 1.3e-23 114.8 304 28.6
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 4.8e-23 112.8 139 42.4
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 2.0e-21 107.5 120 46.7
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 7.7e-21 105.5 102 54.9
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 5.0e-20 102.8 120 44.2
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 1.1e-19 101.7 67 71.6
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 1.4e-19 101.3 67 71.6
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 5.5e-19 99.4 142 40.8
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 1.0e-17 95.1 68 66.2
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 2.8e-15 87.0 260 31.5
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 2.9e-12 77.0 65 53.8
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 1.9e-11 74.3 117 38.5
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 6.3e-07 59.3 78 41.0


User provided reference genes

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