Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2394 Fragaria x ananassa HOM05D003749 ORTHO05D004421 5.4e-53 210.7 103 100.0
RcHm_v2.0_Chr2g0163251 Rosa chinensis HOM05D003749 ORTHO05D004421 8.7e-11 70.5 57 64.9
FvH4_6g45420 Fragaria vesca HOM05D003749 ORTHO05D004421 4.3e-10 68.2 57 61.4
FAN05G0572 Fragaria x ananassa HOM05D003749 ORTHO05D004421 1.6e-09 66.2 57 59.6
FAN14G1502 Fragaria x ananassa HOM05D003749 ORTHO05D004421 1.6e-09 66.2 57 59.6
FAN02G1560 Fragaria x ananassa HOM05D003749 ORTHO05D004421 2.4e-08 62.4 57 56.1
TAR629G3198 Trochodendron aralioides HOM05D003749 ORTHO05D004421 5.3e-08 61.2 57 54.4
Rhsim10G0064100 Rhododendron simsii HOM05D003749 ORTHO05D004421 9.0e-08 60.5 57 54.4
arahy.Tifrunner.gnm1.ann1.G4J1DJ Arachis hypogaea HOM05D003749 ORTHO05D004421 9.9e-07 57.0 91 36.3
arahy.Tifrunner.gnm1.ann1.M5A7E6 Arachis hypogaea HOM05D003749 ORTHO05D004421 9.9e-07 57.0 91 36.3
GSVIVG01036450001 Vitis vinifera HOM05D003749 ORTHO05D004421 9.9e-07 57.0 57 52.6
Actinidia18121 Actinidia chinensis HOM05D003749 ORTHO05D004421 1.7e-06 56.2 57 50.9
ClCG11G005320 Citrullus lanatus HOM05D003749 ORTHO05D004421 1.7e-06 56.2 57 50.9
MELO3C022086.2 Cucumis melo HOM05D003749 ORTHO05D004421 1.7e-06 56.2 57 50.9
CsaV3_5G039100 Cucumis sativus L. HOM05D003749 ORTHO05D004421 1.7e-06 56.2 57 50.9
CSS0014522 Camellia sinensis var. sinensis HOM05D003749 ORTHO05D004421 2.2e-06 55.8 56 50.0
CSS0022784 Camellia sinensis var. sinensis HOM05D003749 ORTHO05D004421 2.2e-06 55.8 56 50.0
LjContig00222g0005460 Lotus japonicus HOM05D003749 ORTHO05D004421 2.2e-06 55.8 57 50.9
Sed0006006 Sechium edule HOM05D003749 ORTHO05D004421 2.2e-06 55.8 57 50.9
vmacro05576 Vaccinium macrocarpon HOM05D003749 ORTHO05D004421 2.2e-06 55.8 60 48.3
Cpa.g.sc179.30 Carica papaya HOM05D003749 ORTHO05D004421 2.9e-06 55.5 57 50.9
Ca_24455_v3 Cicer arietinum L. HOM05D003749 ORTHO05D004421 2.9e-06 55.5 57 49.1
Atru.chr2.1608 Acer truncatum HOM05D003749 ORTHO05D004421 3.8e-06 55.1 57 49.1
Atru.chr8.949 Acer truncatum HOM05D003749 ORTHO05D004421 3.8e-06 55.1 57 49.1
Atru.chr2.1922 Acer truncatum HOM05D003749 ORTHO05D004421 4.9e-06 54.7 57 47.4
THA.LOC104805552 Tarenaya hassleriana HOM05D003749 ORTHO05D004421 4.9e-06 54.7 57 49.1
THA.LOC104823870 Tarenaya hassleriana HOM05D003749 ORTHO05D004421 4.9e-06 54.7 57 47.4
CANSAT64G0170 Cannabis sativa HOM05D003749 ORTHO05D004421 6.4e-06 54.3 57 49.1
TAR374G0647 Trochodendron aralioides HOM05D003749 ORTHO05D004421 6.4e-06 54.3 57 49.1
BcaC08g46151 Brassica carinata HOM05D003749 ORTHO05D004421 8.4e-06 53.9 57 45.6
C06p43020 Brassica napus HOM05D003749 ORTHO05D004421 8.4e-06 53.9 57 45.6
Duzib268G0352 Durio zibethinus HOM05D003749 ORTHO05D004421 8.4e-06 53.9 57 49.1
Gohir.D08G054500 Gossypium hirsutum HOM05D003749 ORTHO05D004421 8.4e-06 53.9 57 49.1
Gorai.004G054900 Gossypium raimondii HOM05D003749 ORTHO05D004421 8.4e-06 53.9 57 49.1
QL02p052938 Quercus lobata HOM05D003749 ORTHO05D004421 8.4e-06 53.9 57 49.1
Thecc.04G138900 Theobroma cacao HOM05D003749 ORTHO05D004421 8.4e-06 53.9 57 49.1


User provided reference genes

Program Settings