Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 2.5e-91 338.6 152 100.0
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.2e-56 223.4 128 74.2
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 2.2e-55 219.2 126 71.4
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 2.2e-55 219.2 125 73.6
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 3.8e-55 218.4 128 72.7
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 5.0e-55 218.0 141 66.7
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 5.0e-55 218.0 128 71.9
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 6.5e-55 217.6 126 72.2
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 2.7e-53 212.2 128 70.3
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 3.9e-52 208.4 124 71.0
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 3.9e-52 208.4 138 65.2
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 6.7e-52 207.6 126 69.8
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 8.8e-52 207.2 128 68.8
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.5e-51 206.5 125 68.8
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 2.0e-51 206.1 143 64.3
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 2.0e-51 206.1 128 68.8
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 2.6e-51 205.7 142 65.5
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 7.4e-51 204.1 126 66.7
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 7.4e-51 204.1 128 65.6
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 9.7e-51 203.8 128 65.6
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.3e-50 203.4 128 67.2
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 4.8e-50 201.4 125 69.6
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 4.8e-50 201.4 126 66.7
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 1.1e-49 200.3 129 66.7
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 1.5e-48 196.4 125 66.4
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 1.0e-47 193.7 125 64.0
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 1.7e-47 193.0 137 59.9
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 2.9e-47 192.2 134 61.2
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 1.9e-46 189.5 143 59.4
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 2.7e-45 185.7 130 61.5
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 4.7e-45 184.9 124 63.7
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 6.1e-45 184.5 132 59.8
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.4e-44 183.3 124 61.3
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.4e-44 183.3 124 61.3
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 1.8e-44 183.0 133 59.4
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 2.3e-44 182.6 132 59.1
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 3.0e-44 182.2 126 60.3
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 3.0e-44 182.2 107 71.0
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 5.2e-44 181.4 126 61.1
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 8.8e-44 180.6 158 55.1
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 1.1e-43 180.3 126 61.9
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 1.5e-43 179.9 125 60.8
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 1.5e-43 179.9 142 56.3
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 2.6e-43 179.1 125 60.8
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 3.3e-43 178.7 125 60.0
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 3.3e-43 178.7 147 56.5
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 2.2e-42 176.0 145 55.2
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 2.2e-42 176.0 116 68.1
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 1.8e-41 172.9 109 67.9
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 3.1e-41 172.2 123 61.0
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 5.3e-41 171.4 138 56.5
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 9.1e-41 170.6 108 65.7
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 4.5e-40 168.3 113 64.6
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 2.9e-39 165.6 150 49.3
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 6.5e-39 164.5 103 66.0
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 3.6e-37 158.7 115 59.1
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 3.6e-37 158.7 107 64.5
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 2.3e-36 156.0 140 52.1
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 4.4e-35 151.8 111 57.7
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 3.7e-34 148.7 100 63.0
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 3.8e-31 138.7 104 58.7
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 8.5e-31 137.5 102 59.8
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 1.9e-30 136.3 86 67.4
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 4.7e-29 131.7 63 82.5
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 1.0e-28 130.6 106 51.9
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 1.3e-26 123.6 122 45.1
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 3.5e-24 115.5 76 61.8
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 2.2e-23 112.8 129 42.6
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 2.9e-23 112.5 126 43.7
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 9.5e-22 107.5 57 75.4
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 8.8e-20 100.9 73 63.0
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 3.1e-17 92.4 73 52.1
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 2.9e-15 85.9 168 36.9
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 1.6e-13 80.1 112 36.6
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 3.0e-12 75.9 127 31.5
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 6.4e-10 68.2 38 73.7
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 2.4e-09 66.2 108 33.3


User provided reference genes

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