Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2331 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.1e-56 221.5 106 100.0
FvH4_4g20923 Fragaria vesca HOM05D000876 ORTHO05D000285 1.8e-35 152.5 112 70.5
FvH4_5g23913 Fragaria vesca HOM05D000876 ORTHO05D000285 1.8e-35 152.5 112 70.5
FAN26G1613 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.8e-34 146.7 112 68.8
FAN04G2125 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.8e-32 142.5 134 61.2
FAN15G0148 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.5e-29 132.1 112 65.2
FAN10G3852 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.7e-28 127.9 118 63.6
FAN08G3019 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.8e-23 110.5 117 53.8
FAN04G1353 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.7e-22 109.4 117 53.0
FAN26G2716 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.7e-17 91.7 74 67.6
FAN28G0183 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.4e-16 89.7 107 48.6
FAN22G0137 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.7e-15 85.5 115 45.2
FAN09G4256 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.5e-15 85.1 120 44.2
FvH4_2g31320 Fragaria vesca HOM05D000876 ORTHO05D022651 6.0e-15 84.3 115 44.3
FvH4_7g08972 Fragaria vesca HOM05D000876 ORTHO05D000285 6.0e-15 84.3 115 44.3
FvH4_7g12221 Fragaria vesca HOM05D000876 ORTHO05D000285 6.0e-15 84.3 115 44.3
FAN05G1224 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.0e-15 84.3 115 44.3
FvH4_6g39920 Fragaria vesca HOM05D000876 ORTHO05D000285 7.8e-15 84.0 115 44.3
FAN09G3353 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.8e-15 84.0 73 64.4
FAN03G2155 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-14 83.2 115 43.5
FAN09G1076 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.3e-14 82.4 124 41.9
FvH4_1g28413 Fragaria vesca HOM05D000876 ORTHO05D015047 8.6e-14 80.5 73 60.3
FAN12G2878 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.6e-14 80.5 109 43.1
FAN03G1971 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-13 80.1 111 42.3
FAN12G1859 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-13 80.1 52 71.2
FAN14G5115 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-13 80.1 109 43.1
RcHm_v2.0_Chr4g0428601 Rosa chinensis HOM05D000876 ORTHO05D000285 3.3e-13 78.6 56 58.9
FAN05G4669 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.6e-13 77.8 109 42.2
FAN21G2291 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.6e-12 75.1 57 63.2
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 4.7e-12 74.7 52 63.5
Prupe.5G207000 Prunus persica HOM05D000876 ORTHO05D000285 4.7e-12 74.7 52 63.5
FAN09G0655 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.2e-10 70.1 52 63.5
MD15G1314200 Malus domestica HOM05D000876 ORTHO05D000285 1.2e-10 70.1 54 57.4
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 1.5e-10 69.7 55 56.4
FAN10G3448 Fragaria x ananassa HOM05D000876 ORTHO05D012261 1.5e-10 69.7 53 60.4
FAN17G2644 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.5e-10 69.7 55 56.4
FAN10G2856 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.0e-10 69.3 55 56.4
FAN11G2191 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.0e-10 69.3 55 56.4
FAN05G3178 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.4e-10 68.6 113 38.9
FAN19G0003 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.4e-10 68.2 55 54.5
FAN09G3146 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.9e-10 67.0 55 52.7
FAN09G3305 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.9e-10 67.0 55 52.7
FAN20G0415 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.7e-09 66.2 54 55.6
FAN21G1280 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.2e-09 65.9 73 56.2
FvH4_3g29921 Fragaria vesca HOM05D000876 ORTHO05D000285 3.8e-09 65.1 50 58.0
FAN02G2707 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.8e-09 65.1 117 41.0
FAN14G5489 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.8e-09 65.1 49 59.2
FAN23G0201 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.8e-09 65.1 101 42.6
FAN23G2351 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.8e-09 65.1 101 42.6
Prupe.6G155900 Prunus persica HOM05D000876 ORTHO05D000285 3.8e-09 65.1 56 51.8
FAN17G0428 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.4e-09 63.9 99 42.4
FvH4_3g21471 Fragaria vesca HOM05D000034 ORTHO05D000285 1.1e-08 63.5 50 58.0
FAN02G2626 Fragaria x ananassa HOM05D007761 ORTHO05D000285 1.4e-08 63.2 67 55.2
FAN17G2734 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.4e-08 63.2 73 45.2
FAN07G1275 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.2e-08 60.5 96 42.7
arahy.Tifrunner.gnm1.ann1.Z5ZQ3Q Arachis hypogaea HOM05D000034 ORTHO05D000037 2.1e-07 59.3 54 51.9
FAN19G2459 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.7e-07 58.9 90 41.1
CANSAT11G0869 Cannabis sativa HOM05D000876 ORTHO05D000285 3.5e-07 58.5 55 45.5
CANSAT64G0985 Cannabis sativa HOM05D000876 ORTHO05D000285 3.5e-07 58.5 55 45.5
arahy.Tifrunner.gnm1.ann1.8YPI5A Arachis hypogaea HOM05D000034 ORTHO05D000037 4.6e-07 58.2 54 51.9
FAN02G3048 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.6e-07 58.2 96 41.7
CANSAT56G0752 Cannabis sativa HOM05D000876 ORTHO05D000285 1.0e-06 57.0 55 43.6
FAN24G3169 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-06 57.0 52 50.0
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 1.3e-06 56.6 55 43.6
Atru.chr3.1562 Acer truncatum HOM05D000876 ORTHO05D000285 1.7e-06 56.2 56 50.0
Atru.chr3.1584 Acer truncatum HOM05D000876 ORTHO05D000285 1.7e-06 56.2 56 50.0
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 3.0e-06 55.5 53 43.4
arahy.Tifrunner.gnm1.ann1.NV9TN2 Arachis hypogaea HOM05D000034 ORTHO05D000037 3.9e-06 55.1 62 46.8
Glyma.19G073700 Glycine max HOM05D000876 ORTHO05D000285 3.9e-06 55.1 70 37.1
SGA_v2.0_scaffold52G19145 Striga asiatica HOM05D023076 ORTHO05D011211 3.9e-06 55.1 52 46.2
arahy.Tifrunner.gnm1.ann1.H2M43I Arachis hypogaea HOM05D000876 ORTHO05D000285 5.1e-06 54.7 62 45.2
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 5.1e-06 54.7 70 38.6
Medtr5g054570 Medicago truncatula HOM05D000876 ORTHO05D000285 5.1e-06 54.7 70 35.7
Prupe.8G016500 Prunus persica HOM05D000876 ORTHO05D000285 5.1e-06 54.7 76 36.8
CANSAT21G2246 Cannabis sativa HOM05D000876 ORTHO05D000285 6.6e-06 54.3 55 41.8
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 6.6e-06 54.3 55 41.8
FAN23G0726 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.6e-06 54.3 35 65.7
Gorai.007G271200 Gossypium raimondii HOM05D000876 ORTHO05D000285 6.6e-06 54.3 76 39.5
FAN17G1755 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.6e-06 53.9 76 38.2
Lj2g0008174 Lotus japonicus HOM05D000876 ORTHO05D000285 8.6e-06 53.9 58 43.1


User provided reference genes

Program Settings