Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2330 Fragaria x ananassa HOM05D004301 ORTHO05D005124 3.6e-71 271.6 144 100.0
FAN12G2174 Fragaria x ananassa HOM05D004301 ORTHO05D005124 6.8e-70 267.3 144 97.2
FvH4_4g21200 Fragaria vesca HOM05D004301 ORTHO05D005124 7.2e-64 247.3 148 91.9
RcHm_v2.0_Chr4g0426811 Rosa chinensis HOM05D004301 ORTHO05D005124 3.6e-63 245.0 146 91.1
Lj1A1229G41 Lonicera japonica HOM05D004301 ORTHO05D005124 3.2e-51 205.3 144 75.0
Cpa.g.sc198.42 Carica papaya HOM05D004301 ORTHO05D005124 6.0e-50 201.1 144 75.0
Atru.chr10.2203 Acer truncatum HOM05D004301 ORTHO05D005124 7.8e-50 200.7 144 74.3
Gohir.D06G153800 Gossypium hirsutum HOM05D004301 ORTHO05D005124 7.8e-50 200.7 144 74.3
Gorai.010G179800 Gossypium raimondii HOM05D004301 ORTHO05D005124 7.8e-50 200.7 144 74.3
Nitab4.5_0007482g0040 Nicotiana tabacum HOM05D004301 ORTHO05D005124 1.0e-49 200.3 144 75.7
PGSC0003DMG400016459 Solanum tuberosum HOM05D004301 ORTHO05D005124 2.3e-49 199.1 144 75.0
vmacro03693 Vaccinium macrocarpon HOM05D004301 ORTHO05D005124 2.3e-49 199.1 144 75.0
Ciclev10017125m.g Citrus clementina HOM05D004301 ORTHO05D005124 3.0e-49 198.7 144 73.6
Duzib235G0809 Durio zibethinus HOM05D004301 ORTHO05D005124 3.0e-49 198.7 144 74.3
Migut.M01306 Erythranthe guttata HOM05D004301 ORTHO05D005124 3.0e-49 198.7 144 72.2
Nitab4.5_0007007g0030 Nicotiana tabacum HOM05D004301 ORTHO05D005124 3.9e-49 198.4 144 75.0
Sp6g04160 Schrenkiella parvula HOM05D004301 ORTHO05D005124 3.9e-49 198.4 144 72.9
THA.LOC104806300 Tarenaya hassleriana HOM05D004301 ORTHO05D005124 3.9e-49 198.4 144 75.0
arahy.Tifrunner.gnm1.ann1.0XE69C Arachis hypogaea HOM05D004301 ORTHO05D005124 6.6e-49 197.6 144 72.2
Sopen02g025120 Solanum pennellii HOM05D004301 ORTHO05D005124 6.6e-49 197.6 144 74.3
arahy.Tifrunner.gnm1.ann1.210EWG Arachis hypogaea HOM05D004301 ORTHO05D005124 8.6e-49 197.2 144 72.2
CSS0003131 Camellia sinensis var. sinensis HOM05D004301 ORTHO05D005124 8.6e-49 197.2 144 73.6
Gohir.A06G147900 Gossypium hirsutum HOM05D004301 ORTHO05D005124 8.6e-49 197.2 144 73.6
Prupe.4G022700 Prunus persica HOM05D004301 ORTHO05D005124 1.5e-48 196.4 144 73.6
TWI63G1781 Tripterygium wilfordii HOM05D004301 ORTHO05D005124 1.5e-48 196.4 144 74.3
Carub.0006s3270 Capsella rubella HOM05D004301 ORTHO05D005124 1.9e-48 196.1 144 73.6
Rhsim13G0155100 Rhododendron simsii HOM05D004301 ORTHO05D005124 1.9e-48 196.1 144 74.3
SalBow8G0640 Salvia bowleyana HOM05D004301 ORTHO05D005124 1.9e-48 196.1 144 71.5
arahy.Tifrunner.gnm1.ann1.6J361A Arachis hypogaea HOM05D004301 ORTHO05D005124 2.5e-48 195.7 144 71.5
CSS0040354 Camellia sinensis var. sinensis HOM05D004301 ORTHO05D005124 2.5e-48 195.7 144 72.9
Rhsim08G0082200 Rhododendron simsii HOM05D004301 ORTHO05D005124 4.3e-48 194.9 144 72.9
CSS0019231 Camellia sinensis var. sinensis HOM05D004301 ORTHO05D005124 5.6e-48 194.5 144 72.9
Peaxi162Scf00595g00039 Petunia axillaris HOM05D004301 ORTHO05D005124 5.6e-48 194.5 144 73.6
Sc05g0009100 Simmondsia chinensis HOM05D004301 ORTHO05D005124 5.6e-48 194.5 144 71.5
AT4G04780 Arabidopsis thaliana HOM05D004301 ORTHO05D005124 7.3e-48 194.1 144 73.6
Lj5g0024394 Lotus japonicus HOM05D004301 ORTHO05D005124 7.3e-48 194.1 143 72.0
Thecc.06G088100 Theobroma cacao HOM05D004301 ORTHO05D005124 7.3e-48 194.1 144 72.2
AL6G48270 Arabidopsis lyrata HOM05D004301 ORTHO05D005124 9.5e-48 193.7 144 73.6
CARHR252750 Cardamine hirsuta HOM05D004301 ORTHO05D005124 9.5e-48 193.7 144 72.2
RcHm_v2.0_Chr5g0030661 Rosa chinensis HOM05D004301 ORTHO05D005124 9.5e-48 193.7 144 72.2
COL.COLO4_28865 Corchorus olitorius HOM05D004301 ORTHO05D005124 1.2e-47 193.4 144 71.5
Solyc02g080430.3 Solanum lycopersicum HOM05D004301 ORTHO05D005124 1.2e-47 193.4 144 72.9
CAN.G1175.8 Capsicum annuum HOM05D004301 ORTHO05D005124 1.6e-47 193.0 144 72.9
Oeu033197.1 Olea europaea HOM05D004301 ORTHO05D005124 1.6e-47 193.0 144 72.2
MSTRG.7223 Avicennia marina HOM05D004301 ORTHO05D005124 2.1e-47 192.6 144 70.8
Cfa000237 Carpinus fangiana HOM05D004301 ORTHO05D005124 2.8e-47 192.2 144 73.6
Lj2g0004276 Lotus japonicus HOM05D004301 ORTHO05D005124 2.8e-47 192.2 143 71.3
Haze_06785 Corylus avellana HOM05D004301 ORTHO05D005124 3.6e-47 191.8 144 73.6
MELO3C014729.2 Cucumis melo HOM05D004301 ORTHO05D005124 3.6e-47 191.8 144 72.2
Dinv18010 Davidia involucrata HOM05D004301 ORTHO05D005124 3.6e-47 191.8 144 71.5
CsaV3_4G017560 Cucumis sativus L. HOM05D004301 ORTHO05D005124 6.2e-47 191.0 144 72.2
Hund21400 Selenicereus undatus HOM05D004301 ORTHO05D005124 6.2e-47 191.0 144 70.1
CANSAT56G0804 Cannabis sativa HOM05D004301 ORTHO05D005124 8.0e-47 190.7 144 72.2
Manes.03G210700 Manihot esculenta HOM05D004301 ORTHO05D005124 1.1e-46 190.3 144 72.2
Phvul.007G037700 Phaseolus vulgaris HOM05D004301 ORTHO05D005124 1.1e-46 190.3 143 69.9
Psat3g175280 Pisum sativum HOM05D004301 ORTHO05D005124 1.1e-46 190.3 143 68.5
Potri.004G017100 Populus trichocarpa HOM05D004301 ORTHO05D005124 1.1e-46 190.3 144 72.2
Sabra04G0009400 Salix brachista HOM05D004301 ORTHO05D005124 1.4e-46 189.9 144 72.2
FAN16G3380 Fragaria x ananassa HOM05D004301 ORTHO05D005124 1.8e-46 189.5 144 70.8
RcHm_v2.0_Chr5g0030681 Rosa chinensis HOM05D004301 ORTHO05D005124 1.8e-46 189.5 144 71.5
BcaB01g01837 Brassica carinata HOM05D004301 ORTHO05D005124 3.1e-46 188.7 150 70.7
CiPaw.09G090400 Carya illinoinensis HOM05D004301 ORTHO05D005124 3.1e-46 188.7 147 70.7
Cc00_g00410 Coffea canephora HOM05D004301 ORTHO05D005124 3.1e-46 188.7 144 71.5
THA.LOC104813057 Tarenaya hassleriana HOM05D004301 ORTHO05D005124 4.0e-46 188.3 144 70.1
SGA_v2.0_scaffold4G01921 Striga asiatica HOM05D004301 ORTHO05D005124 1.2e-45 186.8 147 67.3
Ca_26119_v3 Cicer arietinum L. HOM05D004301 ORTHO05D005124 1.5e-45 186.4 143 68.5
Medtr7g037020 Medicago truncatula HOM05D004301 ORTHO05D005124 2.0e-45 186.0 143 67.8
FvH4_3g18180 Fragaria vesca HOM05D004301 ORTHO05D005124 2.6e-45 185.7 144 70.1
TAR629G3276 Trochodendron aralioides HOM05D004301 ORTHO05D005124 2.6e-45 185.7 144 70.1
TAR626G0955 Trochodendron aralioides HOM05D004301 ORTHO05D005124 3.4e-45 185.3 144 70.1
QL05p073536 Quercus lobata HOM05D004301 ORTHO05D005124 4.4e-45 184.9 147 68.7
TPR.G23756 Trifolium pratense HOM05D004301 ORTHO05D005124 4.4e-45 184.9 143 68.5
Lalb_Chr17g0338691 Lupinus albus HOM05D004301 ORTHO05D005124 5.8e-45 184.5 144 68.8
Manes.09G000400 Manihot esculenta HOM05D004301 ORTHO05D005124 5.8e-45 184.5 144 70.1
Glyma.10G264300 Glycine max HOM05D004301 ORTHO05D005124 9.8e-45 183.7 143 67.8
QL05p073775 Quercus lobata HOM05D004301 ORTHO05D005124 9.8e-45 183.7 147 68.0
Cc03_g13960 Coffea canephora HOM05D004301 ORTHO05D005124 1.3e-44 183.3 145 70.3
ECA248G0561 Erigeron canadensis HOM05D004301 ORTHO05D005124 2.2e-44 182.6 147 67.3
FAN25G1723 Fragaria x ananassa HOM05D004301 ORTHO05D005124 2.2e-44 182.6 144 68.8
Oeu037360.1 Olea europaea HOM05D004301 ORTHO05D005124 2.2e-44 182.6 145 67.6
ATR0752G175 Amborella trichopoda HOM05D004301 ORTHO05D005124 2.9e-44 182.2 144 69.4
A09p26100 Brassica napus HOM05D004301 ORTHO05D005124 2.9e-44 182.2 151 69.5
BraA09t38177Z Brassica rapa HOM05D004301 ORTHO05D005124 2.9e-44 182.2 151 69.5
PGR004G0513 Punica granatum HOM05D004301 ORTHO05D005124 2.9e-44 182.2 144 68.1
PSO339G4464 Papaver somniferum HOM05D004301 ORTHO05D005124 3.7e-44 181.8 144 70.1
PSO384G5030 Papaver somniferum HOM05D004301 ORTHO05D005124 3.7e-44 181.8 144 70.1
Lsat_1_v5_gn_1_128621 Lactuca sativa HOM05D004301 ORTHO05D005124 4.9e-44 181.4 164 64.6
BolC9t56147H Brassica oleracea HOM05D004301 ORTHO05D005124 1.4e-43 179.9 152 66.4
BcaC04g21325 Brassica carinata HOM05D004301 ORTHO05D005124 3.2e-43 178.7 155 65.2
C09p33120 Brassica napus HOM05D004301 ORTHO05D005124 3.2e-43 178.7 155 65.2
DCAR_008141 Daucus carota HOM05D004301 ORTHO05D005124 4.1e-43 178.3 144 69.4
Aa31LG9G9690 Aethionema arabicum HOM05D004301 ORTHO05D005124 7.0e-43 177.6 144 68.1
HPP92_021475 Vanilla planifolia HOM05D004301 ORTHO05D005124 6.0e-42 174.5 144 66.7
Aqoxy3G02575 Aquilegia oxysepala HOM05D004301 ORTHO05D005124 2.3e-41 172.6 152 65.8
C02p40060 Brassica napus HOM05D004301 ORTHO05D005124 2.3e-41 172.6 140 69.3
HanXRQChr10g0285201 Helianthus annuus HOM05D004301 ORTHO05D005124 3.0e-41 172.2 160 61.2
VMungo0720G3170 Vigna mungo HOM05D004301 ORTHO05D005124 5.0e-41 171.4 178 55.6
EL10Ac8g20032 Beta vulgaris HOM05D004301 ORTHO05D005124 6.6e-41 171.0 170 57.6
CDE05G1190 Ceratophyllum demersum HOM05D004301 ORTHO05D005124 6.6e-41 171.0 144 65.3
MBI16_g31789_MAGBIO Magnolia biondii HOM05D004301 ORTHO05D005124 6.6e-41 171.0 158 62.7
MD10G1319700 Malus domestica HOM05D004301 ORTHO05D005124 3.3e-40 168.7 144 64.6
unitig_748.g7577 Utricularia gibba HOM05D004301 ORTHO05D005124 7.3e-40 167.5 144 63.9
CDE04G1315 Ceratophyllum demersum HOM05D004301 ORTHO05D005124 2.1e-39 166.0 144 63.2
PSO170G5652 Papaver somniferum HOM05D004301 ORTHO05D005124 2.8e-39 165.6 144 64.6
BraA02t07511Z Brassica rapa HOM05D004301 ORTHO05D005124 1.1e-38 163.7 140 65.7
Ah.09g234990 Amaranthus hybridus HOM05D004301 ORTHO05D005124 1.8e-38 162.9 176 53.4
arahy.Tifrunner.gnm1.ann1.RW8N71 Arachis hypogaea HOM05D004301 ORTHO05D005124 4.0e-38 161.8 120 72.5
Nn7g37600 Nelumbo nucifera HOM05D004301 ORTHO05D005124 2.0e-37 159.5 118 74.6
Cc00_g35050 Coffea canephora HOM05D004301 ORTHO05D005124 3.4e-37 158.7 145 63.4
ClCG02G024420 Citrullus lanatus HOM05D005410 ORTHO05D007394 1.3e-36 156.8 118 72.9
Prupe.1G108500 Prunus persica HOM05D004301 ORTHO05D005124 1.7e-36 156.4 131 71.8
SEGI_29072 Sequoiadendron giganteum HOM05D004301 ORTHO05D005124 4.9e-36 154.8 144 59.7
AUR62012686 Chenopodium quinoa HOM05D004301 ORTHO05D005124 6.4e-36 154.5 142 61.3
Mapoly0013s0130 Marchantia polymorpha HOM05D004301 ORTHO05D005124 4.6e-34 148.3 144 57.6
unitig_32.g11531 Utricularia gibba HOM05D004301 ORTHO05D005124 6.0e-34 147.9 122 68.0
AagrBONN_evm.TU.Sc2ySwM_362.2472 Anthoceros agrestis HOM05D004301 ORTHO05D005124 7.8e-34 147.5 144 54.9
PSO017G1667 Papaver somniferum HOM05D004301 ORTHO05D005124 3.9e-33 145.2 118 69.5
SEGI_24906 Sequoiadendron giganteum HOM05D004301 ORTHO05D005124 2.5e-32 142.5 174 49.4
FAN20G0317 Fragaria x ananassa HOM05D004301 ORTHO05D005124 7.3e-32 141.0 121 66.1
A02p25250 Brassica napus HOM05D004301 ORTHO05D005124 2.8e-31 139.0 140 60.0
BolC2t10033H Brassica oleracea HOM05D004301 ORTHO05D005124 3.1e-30 135.6 140 59.3
Duzib192G0451 Durio zibethinus HOM05D004301 ORTHO05D005124 5.2e-30 134.8 118 64.4
Pp3c1_16690 Physcomitrium patens HOM05D004301 ORTHO05D005124 2.6e-29 132.5 142 52.1
PSO478G1674 Papaver somniferum HOM05D004301 ORTHO05D005124 4.4e-29 131.7 131 61.8
Oeu033198.1 Olea europaea HOM05D004301 ORTHO05D005124 1.3e-28 130.2 101 70.3
BcaC03g16234 Brassica carinata HOM05D004301 ORTHO05D005124 2.2e-28 129.4 114 65.8
SMO200G0228 Selaginella moellendorffii HOM05D004301 ORTHO05D005124 8.4e-28 127.5 155 51.6
RcHm_v2.0_Chr4g0426791 Rosa chinensis HOM05D004301 ORTHO05D005124 4.1e-27 125.2 77 87.0
Zm00001eb173130 Zea mays HOM05D004301 ORTHO05D005124 7.1e-27 124.4 169 47.3
CBR_g6572 Chara braunii HOM05D004301 ORTHO05D005124 8.7e-25 117.5 141 48.9
Nitab4.5_0003254g0080 Nicotiana tabacum HOM05D004301 ORTHO05D005124 1.5e-24 116.7 80 77.5
Gorai.005G123500 Gossypium raimondii HOM05D004301 ORTHO05D005124 2.5e-24 115.9 81 75.3
Actinidia26923 Actinidia chinensis HOM05D004301 ORTHO05D005124 3.3e-24 115.5 143 52.4
BcaC03g16233 Brassica carinata HOM05D004301 ORTHO05D005124 4.3e-24 115.2 120 59.2
BcaB05g23708 Brassica carinata HOM05D004301 ORTHO05D005124 1.6e-23 113.2 138 49.3
Psat5g160160 Pisum sativum HOM05D004301 ORTHO05D005124 2.8e-23 112.5 90 66.7
Gorai.006G117000 Gossypium raimondii HOM05D004301 ORTHO05D005124 6.2e-23 111.3 79 74.7
Gohir.D09G045050 Gossypium hirsutum HOM05D004301 ORTHO05D005124 8.1e-23 110.9 80 72.5
Gohir.D10G075550 Gossypium hirsutum HOM05D004301 ORTHO05D005124 8.1e-23 110.9 76 77.6
Gohir.D02G172033 Gossypium hirsutum HOM05D004301 ORTHO05D005124 1.8e-22 109.8 80 71.2
Psat5g160080 Pisum sativum HOM05D004301 ORTHO05D005124 1.8e-22 109.8 90 65.6
CDE05G0994 Ceratophyllum demersum HOM05D004301 ORTHO05D005124 3.1e-22 109.0 116 55.2
AUR62021971 Chenopodium quinoa HOM05D004301 ORTHO05D005124 2.2e-20 102.8 69 71.0
Eucgr.G02030 Eucalyptus grandis HOM05D004301 ORTHO05D005124 2.9e-20 102.4 69 76.8
CAN.G138.7 Capsicum annuum HOM05D004301 ORTHO05D005124 4.9e-20 101.7 135 48.9
Os08g0135600 Oryza sativa ssp. japonica HOM05D004301 ORTHO05D005124 1.5e-16 90.1 69 71.0
FAN21G3317 Fragaria x ananassa HOM05D004301 ORTHO05D005124 3.3e-16 89.0 75 65.3
Gorai.001G171600 Gossypium raimondii HOM05D001075 ORTHO05D001779 2.8e-15 85.9 100 53.0
Nitab4.5_0003254g0090 Nicotiana tabacum HOM05D004301 ORTHO05D005124 9.0e-14 80.9 63 68.3
Medtr1g107580 Medicago truncatula HOM05D004301 ORTHO05D005124 9.9e-13 77.4 75 57.3
Aqoxy3G02572 Aquilegia oxysepala HOM05D004301 ORTHO05D005124 2.2e-12 76.3 57 68.4
A05p31460 Brassica napus HOM05D004301 ORTHO05D005124 5.4e-11 71.6 77 57.1
BraA05t21985Z Brassica rapa HOM05D004301 ORTHO05D005124 5.4e-11 71.6 77 57.1
MCO03G202 Micromonas commoda HOM05D004301 ORTHO05D005124 1.0e-09 67.4 137 35.8
C05p45830 Brassica napus HOM05D004301 ORTHO05D005124 3.3e-08 62.4 49 63.3
C05p45820 Brassica napus HOM05D004301 ORTHO05D005124 9.6e-08 60.8 51 58.8
BolC5t33302H Brassica oleracea HOM05D004301 ORTHO05D005124 1.6e-07 60.1 51 58.8
SGA_v2.0_scaffold14G06848 Striga asiatica HOM05D004301 ORTHO05D005124 4.8e-07 58.5 44 61.4
PRCOL_00001918 Prasinoderma coloniale HOM05D004301 ORTHO05D005124 2.4e-06 56.2 144 30.6


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