Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.7e-272 940.3 455 100.0
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 9.7e-264 912.9 455 97.6
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.1e-262 909.4 455 97.4
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.3e-262 907.1 455 96.7
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 1.7e-236 822.4 460 87.4
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.3e-175 620.2 450 70.0
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 1.3e-172 610.1 485 66.0
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 3.0e-172 609.0 483 65.6
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 3.0e-172 609.0 487 65.5
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 4.5e-168 595.1 487 64.5
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 1.6e-165 586.6 459 66.0
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 2.4e-161 572.8 495 61.4
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 3.1e-161 572.4 469 61.6
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 3.6e-157 558.9 470 63.6
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 5.1e-156 555.1 492 60.4
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 8.2e-154 547.7 468 61.8
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 1.8e-153 546.6 472 60.6
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 9.1e-153 544.3 468 61.3
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 2.7e-149 532.7 439 62.0
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 6.7e-148 528.1 490 57.3
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 3.1e-145 519.2 489 57.9
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.5e-144 516.9 473 57.7
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 1.5e-144 516.9 463 61.1
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 4.5e-144 515.4 481 55.7
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.9e-143 512.7 484 56.8
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.1e-142 510.8 491 57.6
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.1e-142 510.8 491 57.6
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.4e-142 510.4 419 62.1
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 9.4e-142 507.7 435 60.9
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 1.2e-141 507.3 477 57.4
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 3.6e-141 505.8 484 55.8
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 2.3e-140 503.1 494 55.9
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 3.0e-140 502.7 460 57.0
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 3.9e-140 502.3 467 56.3
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.9e-140 502.3 463 56.2
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 1.5e-139 500.4 462 56.7
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.5e-139 500.4 464 56.5
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 1.5e-139 500.4 472 55.3
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 2.0e-139 500.0 488 54.7
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 4.4e-139 498.8 491 54.2
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 5.7e-139 498.4 471 56.1
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 8.2e-138 494.6 503 53.9
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 2.4e-137 493.0 484 56.0
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 4.1e-137 492.3 497 53.3
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 4.1e-137 492.3 486 56.0
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 5.3e-137 491.9 488 54.1
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 5.3e-137 491.9 437 56.8
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 9.1e-137 491.1 476 55.5
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 9.1e-137 491.1 484 53.3
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 2.6e-136 489.6 496 54.2
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 2.6e-136 489.6 468 55.1
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 5.9e-136 488.4 410 59.3
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 3.8e-135 485.7 496 54.6
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 5.5e-134 481.9 481 54.3
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 3.6e-133 479.2 436 54.8
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 4.7e-133 478.8 486 53.9
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.0e-132 477.6 479 53.4
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 1.0e-132 477.6 485 52.4
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 1.0e-132 477.6 492 52.4
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 1.4e-132 477.2 426 57.0
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 3.0e-132 476.1 487 52.6
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 6.7e-132 474.9 455 54.7
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 1.2e-131 474.2 486 51.6
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 1.5e-131 473.8 424 57.8
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 5.7e-131 471.9 374 61.8
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 5.7e-131 471.9 418 57.2
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 9.7e-131 471.1 467 54.0
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.7e-130 470.3 458 54.8
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 5.3e-129 465.3 393 58.0
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 7.0e-129 464.9 383 60.3
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 2.0e-128 463.4 446 56.1
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 1.0e-127 461.1 405 57.0
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 1.3e-127 460.7 461 54.7
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 1.3e-127 460.7 446 55.6
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.5e-126 457.2 361 62.9
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 4.2e-126 455.7 367 60.8
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 3.0e-124 449.5 484 52.9
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 7.5e-123 444.9 455 51.0
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 1.8e-121 440.3 412 55.8
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 1.8e-121 440.3 454 51.8
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 3.1e-121 439.5 422 54.0
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 3.1e-121 439.5 460 50.4
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 7.0e-121 438.3 444 52.7
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 2.3e-119 433.3 464 52.6
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 3.8e-119 432.6 436 53.9
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 1.1e-118 431.0 443 52.8
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 1.2e-117 427.6 448 51.6
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 2.1e-117 426.8 465 51.4
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 3.6e-117 426.0 462 51.7
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 6.1e-117 425.2 460 49.1
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 1.8e-116 423.7 453 51.0
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 3.0e-116 422.9 449 52.1
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 3.0e-116 422.9 449 52.1
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 3.0e-116 422.9 449 52.1
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 1.2e-115 421.0 466 49.4
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 9.8e-115 417.9 449 51.9
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.9e-111 406.4 400 50.8
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 3.3e-110 402.9 406 53.4
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 6.8e-100 368.6 360 49.4
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.5e-88 329.7 454 44.1
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 2.4e-81 307.0 347 47.0
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 8.1e-77 292.0 339 46.6
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.3e-74 284.6 268 55.2
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 1.1e-73 281.6 206 62.6
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 2.7e-72 276.9 329 51.4
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 6.2e-69 265.8 392 39.5
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 4.2e-65 253.1 309 48.2
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 1.7e-58 231.1 470 35.7
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 4.3e-54 216.5 387 35.4
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 1.6e-53 214.5 292 43.2
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 1.0e-39 168.7 218 48.6
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.5e-38 164.1 360 33.3
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 2.9e-34 150.6 361 32.4
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 3.8e-34 150.2 336 32.4
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.1e-32 144.4 377 30.8
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 7.4e-30 136.0 112 60.7
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 2.2e-29 134.4 156 48.7
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 4.8e-29 133.3 315 34.3
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.5e-27 128.3 251 37.1
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 4.5e-27 126.7 129 52.7
AagrBONN_evm.TU.Sc2ySwM_362.1561 Anthoceros agrestis HOM05D006399 ORTHO05D007988 2.2e-21 107.8 300 31.0
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 4.2e-17 93.6 52 75.0
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 1.8e-07 61.6 46 60.9


User provided reference genes

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