Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G1979 Fragaria x ananassa HOM05D029018 ORTHO05D009885 6.4e-60 233.8 111 100.0
FAN28G0217 Fragaria x ananassa HOM05D029018 ORTHO05D009885 9.3e-35 150.2 69 97.1
QL02p029509 Quercus lobata HOM05D001828 ORTHO05D001745 2.3e-33 145.6 93 80.6
QL02p029498 Quercus lobata HOM05D001828 ORTHO05D001745 1.5e-32 142.9 93 76.3
Atru.chr10.37 Acer truncatum HOM05D001828 ORTHO05D001745 1.9e-32 142.5 70 94.3
Atru.chr10.43 Acer truncatum HOM05D001828 ORTHO05D001745 1.9e-32 142.5 70 94.3
Atru.chr9.1 Acer truncatum HOM05D001828 ORTHO05D001745 1.9e-32 142.5 70 94.3
Atru.chr9.218 Acer truncatum HOM05D001828 ORTHO05D001745 1.9e-32 142.5 70 94.3
FAN25G1010 Fragaria x ananassa HOM05D008177 ORTHO05D010128 4.8e-31 137.9 74 81.1
ScUNg0000970 Simmondsia chinensis HOM05D007167 ORTHO05D009885 1.3e-28 129.8 73 82.2
EL10As7g23711 Beta vulgaris HOM05D001828 ORTHO05D001745 4.9e-28 127.9 74 81.1
FAN08G2289 Fragaria x ananassa HOM05D001828 ORTHO05D009885 1.4e-27 126.3 62 90.3
unitig_676.g29551 Utricularia gibba HOM05D001029 ORTHO05D000917 3.2e-27 125.2 73 82.2
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 4.6e-26 121.3 57 96.5
QL04p056327 Quercus lobata HOM05D001828 ORTHO05D009885 3.0e-25 118.6 57 93.0
EL10Ac2g03013 Beta vulgaris HOM05D001828 ORTHO05D001745 2.5e-24 115.5 74 74.3
QL02p004526 Quercus lobata HOM05D001828 ORTHO05D001745 5.6e-24 114.4 56 92.9
unitig_135.g35493 Utricularia gibba HOM05D001029 ORTHO05D009885 9.6e-24 113.6 66 81.8
CSS0027849 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 2.8e-23 112.1 56 91.1
Sopen00g001870 Solanum pennellii HOM05D003608 ORTHO05D000917 2.8e-23 112.1 66 80.3
arahy.Tifrunner.gnm1.ann1.CYZ3KW Arachis hypogaea HOM05D001828 ORTHO05D001745 6.2e-23 110.9 57 89.5
arahy.Tifrunner.gnm1.ann1.V6U7IH Arachis hypogaea HOM05D001828 ORTHO05D001745 6.2e-23 110.9 57 89.5
arahy.Tifrunner.gnm1.ann1.HA5ZC6 Arachis hypogaea HOM05D001828 ORTHO05D009885 1.8e-22 109.4 57 87.7
CSS0048211 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D009885 3.1e-22 108.6 56 87.5
arahy.Tifrunner.gnm1.ann1.B2M0SA Arachis hypogaea HOM05D001828 ORTHO05D001745 5.3e-22 107.8 55 89.1
CSS0030230 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 3.4e-21 105.1 56 85.7
CSS0047713 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 4.5e-21 104.8 56 85.7
Oeu020383.1 Olea europaea HOM05D000920 ORTHO05D004854 5.8e-21 104.4 58 81.0
PGSC0003DMG400044276 Solanum tuberosum HOM05D001828 ORTHO05D001745 7.6e-21 104.0 52 92.3
CDE02G0001 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 2.9e-20 102.1 56 80.4
CDE02G2883 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 2.9e-20 102.1 56 80.4
CDE02G3303 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 2.9e-20 102.1 56 80.4
Psat3g188680 Pisum sativum HOM05D003608 ORTHO05D010128 1.0e-17 93.6 47 89.4
PGSC0003DMG400035737 Solanum tuberosum HOM05D001828 ORTHO05D001745 1.3e-17 93.2 46 93.5
Oeu006837.1 Olea europaea HOM05D001828 ORTHO05D001745 8.7e-17 90.5 50 82.0
Sc06g0003810 Simmondsia chinensis HOM05D007167 ORTHO05D009885 7.4e-16 87.4 57 68.4
unitig_807.g34420 Utricularia gibba HOM05D001029 ORTHO05D009885 8.2e-15 84.0 74 64.9
QL93p0381_0031 Quercus lobata HOM05D007855 ORTHO05D003704 1.4e-14 83.2 45 86.7
QL93p0428_0015 Quercus lobata HOM05D001828 ORTHO05D009885 1.4e-14 83.2 45 86.7
Sc06g0003800 Simmondsia chinensis HOM05D001828 ORTHO05D009885 1.8e-14 82.8 44 88.6
CSS0047100 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 9.0e-14 80.5 54 72.2
EL10As19g24180 Beta vulgaris HOM05D000920 ORTHO05D004854 1.5e-13 79.7 51 74.5
Medtr0055s0130 Medicago truncatula HOM05D001828 ORTHO05D001745 1.0e-12 77.0 46 80.4
Thhalv10028070m.g Eutrema salsugineum HOM05D001828 ORTHO05D001745 2.2e-12 75.9 47 74.5
Sopen07g009460 Solanum pennellii HOM05D003608 ORTHO05D010452 3.8e-12 75.1 66 57.6
Duzib217G0002 Durio zibethinus HOM05D001828 ORTHO05D001745 5.0e-12 74.7 73 57.5
LjContig00371g0019658 Lotus japonicus HOM05D001828 ORTHO05D000917 8.5e-12 73.9 37 91.9
LjContig00372g0002420 Lotus japonicus HOM05D001828 ORTHO05D000917 8.5e-12 73.9 37 91.9
Duzib250G0005 Durio zibethinus HOM05D001828 ORTHO05D001745 1.1e-11 73.6 47 72.3
Sopen00g002240 Solanum pennellii HOM05D000691 ORTHO05D000378 1.8e-09 66.2 37 86.5
Medtr5g031940 Medicago truncatula HOM05D001828 ORTHO05D009885 2.3e-09 65.9 42 76.2
Sopen00g005120 Solanum pennellii HOM05D000691 ORTHO05D000378 2.3e-09 65.9 53 60.4
Oeu009467.1 Olea europaea HOM05D003608 ORTHO05D009885 2.5e-08 62.4 32 90.6
PGSC0003DMG400044154 Solanum tuberosum HOM05D001828 ORTHO05D009885 4.3e-08 61.6 48 62.5
PRCOL_00001071 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 2.8e-07 58.9 75 46.7
PRCOL_00001096 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 2.8e-07 58.9 75 46.7
PRCOL_00001112 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 2.8e-07 58.9 75 46.7
PRCOL_00001183 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 2.8e-07 58.9 75 46.7
PRCOL_00001198 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 2.8e-07 58.9 75 46.7
QL93p0473_0014 Quercus lobata HOM05D029018 ORTHO05D050626 3.7e-07 58.5 57 52.6
Psat7g211960 Pisum sativum HOM05D001828 ORTHO05D001745 1.1e-06 57.0 29 89.7
QL93p0473_0006 Quercus lobata HOM05D029018 ORTHO05D050626 5.3e-06 54.7 57 50.9


User provided reference genes

Program Settings