Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 5.8e-264 913.7 463 100.0
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.6e-229 797.7 463 89.6
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 2.2e-223 778.9 463 88.6
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 5.0e-223 777.7 463 88.3
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.4e-222 776.2 463 88.3
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 1.2e-205 719.9 463 82.5
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.9e-199 698.7 481 78.8
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 2.8e-186 655.6 463 73.7
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.8e-180 636.3 461 71.4
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 4.0e-180 635.2 461 71.4
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 8.8e-180 634.0 461 71.4
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 3.1e-177 625.5 464 71.6
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 5.9e-176 621.3 460 69.8
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 1.9e-174 616.3 483 68.7
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 5.6e-174 614.8 462 71.2
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 6.1e-173 611.3 458 69.9
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 1.0e-172 610.5 451 70.3
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 1.4e-172 610.1 457 70.7
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 5.2e-172 608.2 459 67.3
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 8.9e-172 607.4 457 67.8
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 2.9e-170 602.4 461 69.4
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 3.7e-170 602.1 451 68.3
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 3.7e-170 602.1 458 69.7
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 6.4e-170 601.3 457 68.3
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 1.1e-169 600.5 457 68.3
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 7.0e-169 597.8 457 68.5
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 1.2e-168 597.0 459 66.4
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 1.0e-167 594.0 457 67.8
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 1.3e-167 593.6 459 65.8
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 3.9e-167 592.0 459 65.8
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 5.0e-167 591.7 459 65.6
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 6.6e-167 591.3 450 68.4
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 1.9e-166 589.7 458 65.7
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 1.9e-166 589.7 463 65.0
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 2.5e-166 589.3 459 66.0
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 3.3e-166 589.0 459 65.6
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 4.3e-166 588.6 458 65.5
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 5.6e-166 588.2 465 66.7
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 5.6e-166 588.2 458 65.7
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 9.5e-166 587.4 462 67.1
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 1.2e-165 587.0 453 66.2
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 6.2e-165 584.7 453 66.9
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.8e-164 583.2 460 66.1
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 4.0e-164 582.0 488 62.7
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 5.2e-164 581.6 461 65.7
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 1.3e-162 577.0 459 64.9
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 1.7e-162 576.6 461 65.3
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 3.7e-162 575.5 488 61.9
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 8.3e-162 574.3 488 61.7
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 1.4e-161 573.5 469 62.9
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 1.4e-161 573.5 452 66.2
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 1.9e-161 573.2 461 64.4
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 1.7e-159 566.6 459 63.4
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 1.7e-159 566.6 459 64.9
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 1.7e-159 566.6 454 65.2
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 5.0e-159 565.1 451 65.2
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 5.0e-159 565.1 453 65.1
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 3.3e-158 562.4 456 63.8
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 4.3e-158 562.0 460 63.7
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 5.6e-158 561.6 458 63.5
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 7.3e-158 561.2 459 64.5
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 9.5e-158 560.8 460 62.8
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 2.1e-157 559.7 456 63.4
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 6.2e-157 558.1 449 65.7
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 2.3e-156 556.2 459 62.7
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 4.0e-156 555.4 461 62.9
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 4.0e-156 555.4 461 65.1
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 4.0e-156 555.4 457 64.1
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 6.8e-156 554.7 461 64.0
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 9.8e-155 550.8 480 61.9
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 4.9e-154 548.5 498 60.0
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 4.1e-153 545.4 448 65.0
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 5.6e-150 535.0 455 62.0
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 7.3e-150 534.6 461 63.3
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 1.2e-149 533.9 461 63.6
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 1.6e-149 533.5 465 61.1
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 1.8e-148 530.0 504 57.7
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 6.8e-148 528.1 486 58.8
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 3.4e-147 525.8 509 57.4
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 4.9e-146 521.9 425 66.4
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.1e-145 520.8 473 59.2
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 4.7e-141 505.4 377 71.1
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 1.3e-138 497.3 445 60.4
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 4.9e-138 495.4 457 59.3
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 4.9e-138 495.4 461 58.1
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 6.4e-138 495.0 445 60.2
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 1.1e-137 494.2 389 67.1
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 1.2e-136 490.7 501 53.5
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 4.6e-136 488.8 455 54.7
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 6.0e-136 488.4 445 59.3
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 3.4e-131 472.6 457 57.3
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 4.9e-130 468.8 456 54.6
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 1.9e-129 466.8 403 61.0
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 7.1e-129 464.9 467 54.2
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 2.5e-126 456.4 348 71.0
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 4.0e-124 449.1 510 52.2
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 2.0e-115 420.2 454 51.8
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 1.9e-113 413.7 361 63.4
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.6e-112 410.6 310 68.1
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 7.6e-107 391.7 464 49.6
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 1.6e-101 374.0 310 61.9
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 1.4e-97 360.9 289 66.4
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 2.3e-95 353.6 265 67.2
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 1.1e-94 351.3 464 43.3
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 2.2e-93 347.1 258 70.5
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 5.9e-91 339.0 233 73.0
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 1.4e-89 334.3 233 73.8
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 1.4e-89 334.3 454 45.2
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 1.5e-86 324.3 442 43.9
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 1.8e-84 317.4 337 53.4
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 5.9e-83 312.4 267 61.0
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.2e-78 298.1 404 44.6
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 3.3e-78 296.6 335 50.1
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 6.3e-77 292.4 460 41.5
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 5.4e-68 262.7 407 42.3
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 2.6e-62 243.8 250 55.2
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 2.7e-59 233.8 191 68.6
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 1.5e-57 228.0 160 70.0
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.8e-55 221.1 137 75.2
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 1.3e-53 214.9 173 65.3
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 1.7e-50 204.5 439 33.5
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 1.3e-45 188.3 143 67.1
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 4.9e-45 186.4 204 50.0
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 1.8e-39 167.9 446 31.6
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 3.2e-36 157.1 158 54.4
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 4.3e-33 146.7 107 72.0
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 5.6e-33 146.4 101 67.3
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 6.2e-32 142.9 349 31.2
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 7.6e-30 136.0 95 72.6
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 8.4e-29 132.5 87 77.0
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.2e-24 118.6 69 87.0
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 1.6e-19 101.7 380 26.6
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.6e-19 101.7 96 51.0
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.0e-18 99.0 116 55.2
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 1.1e-17 95.5 149 39.6
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 1.5e-14 85.1 79 59.5
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.7e-13 81.6 97 44.3


User provided reference genes

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