Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G1632 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.2e-43 179.5 90 100.0
FAN01G1775 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.9e-33 145.6 103 74.8
FAN16G1830 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.9e-33 145.6 100 77.0
FAN09G3363 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.7e-31 139.0 104 73.1
FvH4_3g14361 Fragaria vesca HOM05D000539 ORTHO05D000233 2.4e-25 118.6 89 70.8
FvH4_7g02602 Fragaria vesca HOM05D000539 ORTHO05D000233 2.4e-25 118.6 89 70.8
FAN06G1168 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.4e-25 118.6 89 70.8
FAN24G3557 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.4e-25 117.5 89 69.7
FAN14G5321 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.2e-25 116.7 89 69.7
FvH4_5g19271 Fragaria vesca HOM05D000539 ORTHO05D000233 2.1e-24 115.5 89 68.5
FAN11G1109 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.1e-24 115.5 89 69.7
FAN07G2711 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.1e-23 110.9 88 69.3
FAN27G3263 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.5e-22 109.4 89 67.4
FAN03G1033 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.3e-22 107.1 89 67.4
FvH4_7g02152 Fragaria vesca HOM05D000539 ORTHO05D000233 6.4e-18 94.0 78 65.4
FAN17G0233 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.9e-17 92.4 58 79.3
FAN04G3167 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.2e-17 91.7 89 57.3
FAN02G4302 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.2e-16 89.7 82 62.2
RcHm_v2.0_Chr1g0342101 Rosa chinensis HOM05D000539 ORTHO05D000233 1.2e-16 89.7 89 52.8
RcHm_v2.0_Chr4g0391901 Rosa chinensis HOM05D000539 ORTHO05D000233 1.2e-16 89.7 89 52.8
RcHm_v2.0_Chr7g0228371 Rosa chinensis HOM05D000539 ORTHO05D000233 1.2e-16 89.7 89 52.8
FvH4_2g18191 Fragaria vesca HOM05D000539 ORTHO05D000233 5.6e-14 80.9 89 55.1
FvH4_5g31521 Fragaria vesca HOM05D000539 ORTHO05D000233 5.3e-12 74.3 42 85.7
RcHm_v2.0_Chr3g0462471 Rosa chinensis HOM05D000539 ORTHO05D000233 2.6e-11 72.0 89 43.8
FAN10G1391 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.4e-11 71.6 89 51.7
RcHm_v2.0_Chr5g0082411 Rosa chinensis HOM05D000539 ORTHO05D000233 7.6e-11 70.5 89 42.7
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 9.9e-11 70.1 89 39.3
FvH4_5g20921 Fragaria vesca HOM05D000539 ORTHO05D000233 1.7e-10 69.3 89 40.4
FvH4_3g26442 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-09 66.6 89 39.3
RcHm_v2.0_Chr2g0123111 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-09 66.6 89 41.6
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-09 66.6 89 42.7
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 3.2e-09 65.1 89 41.6
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 3.2e-09 65.1 89 39.3
RcHm_v2.0_Chr2g0108861 Rosa chinensis HOM05D000539 ORTHO05D000233 7.1e-09 63.9 89 38.2
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 2.1e-08 62.4 89 39.3
RcHm_v2.0_Chr2g0102081 Rosa chinensis HOM05D000539 ORTHO05D000233 2.1e-08 62.4 89 40.4
RcHm_v2.0_Chr2g0095191 Rosa chinensis HOM05D000107 ORTHO05D000062 2.7e-08 62.0 89 41.6
FAN02G4002 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.0e-08 60.8 30 93.3
RcHm_v2.0_Chr5g0066151 Rosa chinensis HOM05D000539 ORTHO05D000233 6.0e-08 60.8 89 39.3
RcHm_v2.0_Chr5g0072981 Rosa chinensis HOM05D000539 ORTHO05D000233 1.3e-07 59.7 89 39.3
FAN23G1195 Fragaria x ananassa HOM05D000723 ORTHO05D001760 1.7e-07 59.3 89 34.8
FvH4_1g20221 Fragaria vesca HOM05D000539 ORTHO05D000233 2.3e-07 58.9 89 36.0
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 2.3e-07 58.9 89 37.1
FvH4_4g16176 Fragaria vesca HOM05D000539 ORTHO05D000233 3.0e-07 58.5 30 90.0
FAN03G0903 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.0e-07 58.5 89 38.2
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 3.9e-07 58.2 89 38.2
FAN19G0390 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.9e-07 58.2 89 38.2
FAN09G2875 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.1e-07 57.8 89 36.0
FAN21G0704 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.1e-07 57.8 29 93.1
RcHm_v2.0_Chr6g0271081 Rosa chinensis HOM05D000539 ORTHO05D000233 5.1e-07 57.8 81 43.2
FvH4_3g30982 Fragaria vesca HOM05D000539 ORTHO05D000233 6.6e-07 57.4 89 37.1
FAN02G2878 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.6e-07 57.4 89 38.2
FAN02G4277 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.6e-07 57.4 89 38.2
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 6.6e-07 57.4 89 32.6
FAN28G1329 Fragaria x ananassa HOM05D000723 ORTHO05D001760 8.7e-07 57.0 89 34.8
FvH4_3g19213 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-06 56.6 89 36.0
FvH4_3g31713 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-06 56.6 89 36.0
FAN09G4072 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-06 56.6 89 36.0
FAN18G3492 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-06 56.6 89 36.0
RcHm_v2.0_Chr6g0267111 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-06 56.6 89 34.8
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 1.9e-06 55.8 89 36.0
RcHm_v2.0_Chr4g0414231 Rosa chinensis HOM05D000539 ORTHO05D000233 1.9e-06 55.8 89 37.1
RcHm_v2.0_Chr5g0072061 Rosa chinensis HOM05D000539 ORTHO05D000233 1.9e-06 55.8 89 37.1
GSVIVG01000866001 Vitis vinifera HOM05D000539 ORTHO05D000233 1.9e-06 55.8 87 40.2
FvH4_4g10052 Fragaria vesca HOM05D000539 ORTHO05D000233 3.3e-06 55.1 89 34.8
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 5.6e-06 54.3 89 30.3
DCAR_031676 Daucus carota HOM05D000539 ORTHO05D000233 5.6e-06 54.3 89 36.0
FvH4_1g25001 Fragaria vesca HOM05D000539 ORTHO05D000233 5.6e-06 54.3 87 35.6
FvH4_6g23071 Fragaria vesca HOM05D000539 ORTHO05D000233 5.6e-06 54.3 30 86.7
FvH4_7g09681 Fragaria vesca HOM05D000539 ORTHO05D000233 5.6e-06 54.3 89 37.1
Prupe.2G155700 Prunus persica HOM05D000539 ORTHO05D000233 5.6e-06 54.3 85 37.6
Prupe.4G254700 Prunus persica HOM05D000539 ORTHO05D000233 5.6e-06 54.3 85 37.6
Prupe.7G029100 Prunus persica HOM05D000539 ORTHO05D000592 5.6e-06 54.3 85 37.6
Prupe.8G054500 Prunus persica HOM05D000539 ORTHO05D000592 5.6e-06 54.3 85 37.6
RcHm_v2.0_Chr2g0147531 Rosa chinensis HOM05D000539 ORTHO05D000233 5.6e-06 54.3 89 37.1
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 7.3e-06 53.9 89 30.3
FvH4_1g20121 Fragaria vesca HOM05D000539 ORTHO05D000233 7.3e-06 53.9 87 34.5
Prupe.4G254500 Prunus persica HOM05D000539 ORTHO05D000233 7.3e-06 53.9 85 34.1
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.6e-06 53.5 89 32.6
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.6e-06 53.5 89 32.6
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.6e-06 53.5 89 32.6
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.6e-06 53.5 89 32.6
FAN28G1622 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.6e-06 53.5 89 32.6
Prupe.3G107500 Prunus persica HOM05D000539 ORTHO05D000233 9.6e-06 53.5 85 34.1


User provided reference genes

Program Settings