Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.6e-250 869.0 441 100.0
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.0e-225 785.0 441 91.6
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 8.0e-223 776.9 441 91.2
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 2.4e-219 765.4 430 91.4
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 1.3e-209 733.0 441 85.7
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 6.0e-202 707.6 364 98.1
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 8.4e-196 687.2 435 80.7
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 5.5e-179 631.3 437 73.7
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 5.5e-179 631.3 434 74.7
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 1.5e-176 623.2 426 74.6
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 4.3e-176 621.7 418 74.9
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 5.3e-174 614.8 432 74.3
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 5.3e-174 614.8 435 71.0
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 5.3e-174 614.8 364 81.3
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 1.2e-173 613.6 435 70.6
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 1.0e-172 610.5 385 77.7
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 2.9e-172 609.0 367 80.1
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 6.5e-172 607.8 443 70.2
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 2.5e-171 605.9 388 80.4
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 4.2e-171 605.1 367 81.5
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 1.6e-170 603.2 363 80.7
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 6.0e-170 601.3 364 79.7
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 7.9e-170 600.9 433 70.0
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 1.8e-169 599.7 459 67.8
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 3.0e-169 599.0 365 80.8
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 6.7e-169 597.8 364 79.4
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 8.7e-169 597.4 359 80.8
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 1.9e-168 596.3 437 71.4
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 2.5e-168 595.9 368 79.6
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 4.3e-168 595.1 365 79.7
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 4.3e-168 595.1 370 79.2
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 5.7e-168 594.7 364 80.2
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 8.2e-167 590.9 364 80.5
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 1.1e-166 590.5 416 71.4
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 1.8e-166 589.7 370 79.5
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 1.8e-166 589.7 417 71.7
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 3.1e-166 589.0 364 79.1
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 5.3e-166 588.2 369 77.2
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 9.0e-166 587.4 368 77.7
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 3.4e-165 585.5 395 73.9
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 1.0e-164 583.9 362 78.5
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 1.3e-164 583.6 364 78.6
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 1.4e-163 580.1 362 77.9
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 1.9e-163 579.7 368 78.0
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 1.9e-163 579.7 359 79.7
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 2.5e-163 579.3 391 73.1
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 3.2e-163 578.9 364 76.6
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 7.2e-163 577.8 371 76.5
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 4.6e-162 575.1 397 73.3
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 1.0e-161 573.9 363 78.0
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.4e-161 573.5 362 77.3
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 1.8e-161 573.2 352 78.1
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 6.7e-161 571.2 360 77.5
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 6.7e-161 571.2 373 75.3
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 1.1e-160 570.5 414 68.8
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 2.2e-159 566.2 379 74.1
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 1.1e-158 563.9 349 78.2
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 1.8e-158 563.1 365 75.3
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 8.5e-156 554.3 365 73.2
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 1.0e-153 547.4 363 75.5
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 9.7e-152 540.8 364 73.4
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 1.3e-151 540.4 358 73.7
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 4.8e-151 538.5 353 73.9
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 1.8e-150 536.6 352 77.0
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 2.6e-149 532.7 368 73.9
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 7.7e-149 531.2 362 72.7
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 2.9e-148 529.3 406 69.0
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 3.7e-143 512.3 356 67.1
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 2.4e-142 509.6 360 67.5
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 3.0e-137 492.7 399 65.7
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.3e-135 487.3 346 67.9
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.3e-135 487.3 346 67.9
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 2.9e-132 476.1 300 80.0
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.9e-131 473.4 364 68.7
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 2.0e-128 463.4 370 66.2
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 8.6e-124 448.0 368 60.9
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 1.5e-112 410.6 287 71.4
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 3.2e-110 402.9 298 67.8
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.6e-109 400.6 346 58.4
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 1.9e-107 393.7 284 69.7
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 2.8e-106 389.8 344 63.7
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 2.6e-96 356.7 293 63.1
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 4.9e-95 352.4 279 67.0
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.1e-89 334.7 231 69.7
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 1.3e-82 311.2 355 47.3
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 2.6e-80 303.5 174 80.5
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 5.1e-68 262.7 256 56.2
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 2.3e-60 237.3 145 77.9
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 6.7e-52 209.1 140 75.0
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 1.9e-51 207.6 134 79.1
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 6.1e-13 79.7 77 58.4


User provided reference genes

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