Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G1480 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.3e-58 228.8 126 100.0
FAN07G2660 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.3e-58 228.8 126 100.0
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.4e-47 192.2 113 94.7
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 5.0e-45 184.5 114 95.6
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 8.6e-45 183.7 114 94.7
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 8.6e-45 183.7 114 92.1
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 4.1e-31 138.3 115 79.1
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 4.3e-20 101.7 117 59.0
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 5.1e-13 78.2 64 60.9
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 5.1e-13 78.2 115 53.0
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 6.6e-13 77.8 72 58.3
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 2.5e-12 75.9 66 62.1
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 7.4e-12 74.3 68 58.8
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 9.6e-12 73.9 87 51.7
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 1.6e-11 73.2 67 59.7
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 2.8e-11 72.4 66 66.7
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 3.6e-11 72.0 72 63.9
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 3.6e-11 72.0 87 56.3
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 8.1e-11 70.9 106 44.3
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 1.4e-10 70.1 86 44.2
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 1.8e-10 69.7 69 65.2
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 2.4e-10 69.3 62 59.7
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 2.4e-10 69.3 60 63.3
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 2.4e-10 69.3 62 71.0
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 2.4e-10 69.3 108 49.1
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 2.4e-10 69.3 111 48.6
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 3.1e-10 68.9 111 45.9
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 3.1e-10 68.9 40 82.5
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 5.3e-10 68.2 64 68.8
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 6.9e-10 67.8 112 44.6
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 6.9e-10 67.8 63 57.1
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 6.9e-10 67.8 62 58.1
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 6.9e-10 67.8 93 51.6
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 9.0e-10 67.4 112 40.2
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 9.0e-10 67.4 68 69.1
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 1.5e-09 66.6 63 58.7
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 1.5e-09 66.6 63 58.7
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 1.5e-09 66.6 62 56.5
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 1.5e-09 66.6 91 42.9
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 2.0e-09 66.2 62 62.9
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 2.0e-09 66.2 62 54.8
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 2.0e-09 66.2 65 60.0
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 2.6e-09 65.9 111 41.4
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 2.6e-09 65.9 104 51.0
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 2.6e-09 65.9 62 59.7
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 2.6e-09 65.9 60 71.7
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 4.5e-09 65.1 63 55.6
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 4.5e-09 65.1 92 45.7
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 4.5e-09 65.1 91 47.3
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 4.5e-09 65.1 92 45.7
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 4.5e-09 65.1 111 45.0
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 4.5e-09 65.1 112 52.7
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 5.8e-09 64.7 91 47.3
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 5.8e-09 64.7 91 47.3
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 9.9e-09 63.9 63 54.0
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 1.7e-08 63.2 60 53.3
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 1.7e-08 63.2 63 54.0
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 2.2e-08 62.8 114 40.4
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 3.8e-08 62.0 75 56.0
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 4.9e-08 61.6 61 57.4
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 4.9e-08 61.6 95 43.2
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 6.4e-08 61.2 98 44.9
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 6.4e-08 61.2 112 40.2
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 8.4e-08 60.8 121 33.1
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.1e-07 60.5 68 66.2
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 1.1e-07 60.5 63 66.7
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 1.9e-07 59.7 59 55.9
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 3.2e-07 58.9 62 71.0
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 5.5e-07 58.2 64 53.1
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 5.5e-07 58.2 60 53.3
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 5.5e-07 58.2 68 48.5
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 7.1e-07 57.8 114 33.3
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 7.1e-07 57.8 60 50.0
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 1.6e-06 56.6 100 40.0
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 3.5e-06 55.5 65 49.2
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 4.6e-06 55.1 65 49.2
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 4.6e-06 55.1 67 49.3
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 6.0e-06 54.7 113 42.5
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 6.0e-06 54.7 108 46.3
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 7.9e-06 54.3 37 70.3


User provided reference genes

Program Settings