Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G1029 Fragaria x ananassa HOM05D005773 ORTHO05D006930 3.3e-170 601.7 311 100.0
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 4.1e-48 196.1 149 73.2
FAN12G0946 Fragaria x ananassa HOM05D005773 ORTHO05D046089 2.3e-43 180.3 149 69.1
FvH4_4g21660 Fragaria vesca HOM05D005773 ORTHO05D046089 1.5e-42 177.6 138 71.0
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.5e-42 177.6 136 74.3
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 6.4e-41 172.2 135 73.3
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 3.2e-40 169.9 136 70.6
FvH4_6g31171 Fragaria vesca HOM05D002480 ORTHO05D003145 1.5e-26 124.4 137 50.4
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 4.4e-26 122.9 158 53.2
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 6.4e-25 119.0 139 56.1
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 1.9e-24 117.5 165 47.3
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 1.0e-22 111.7 144 50.7
FAN14G1957 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-20 104.8 106 54.7
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 9.9e-18 95.1 167 40.7
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 1.3e-17 94.7 174 41.4
FvH4_4g02561 Fragaria vesca HOM05D002480 ORTHO05D198563 2.4e-16 90.5 65 70.8
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 4.2e-16 89.7 160 41.2
FvH4_4g26661 Fragaria vesca HOM05D002480 ORTHO05D003145 4.6e-15 86.3 157 39.5
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 6.0e-15 85.9 161 41.6
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 1.8e-14 84.3 158 43.0
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 2.3e-14 84.0 160 40.6
FAN12G0307 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-14 84.0 158 39.9
FAN26G0220 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-13 81.6 138 38.4
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 1.1e-13 81.6 128 43.0
FAN12G2038 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.5e-13 80.5 157 38.2
FvH4_3g34441 Fragaria vesca HOM05D002480 ORTHO05D003145 4.3e-13 79.7 136 35.3
FAN02G1343 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.6e-13 79.3 139 38.1
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 7.4e-13 79.0 167 38.9
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 1.3e-12 78.2 162 38.3
FAN06G5011 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-12 78.2 139 37.4
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 1.3e-12 78.2 162 37.7
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 1.6e-12 77.8 160 38.8
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 1.6e-12 77.8 160 38.8
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 2.8e-12 77.0 162 37.7
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 2.8e-12 77.0 163 39.3
FAN15G1902 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.8e-12 77.0 139 37.4
FAN03G2236 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.7e-12 76.6 139 37.4
FAN09G1485 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.8e-12 76.3 139 36.7
FAN19G0872 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.8e-12 76.3 114 42.1
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 4.8e-12 76.3 169 39.6
FAN18G3922 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.2e-12 75.9 114 42.1
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 8.1e-12 75.5 162 38.9
FAN08G0647 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.1e-12 75.5 139 37.4
FAN23G1644 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.1e-12 75.5 139 36.7
FAN16G2492 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-11 74.7 139 36.7
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 2.4e-11 73.9 157 38.9
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 3.1e-11 73.6 164 39.0
FAN09G1541 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.0e-11 73.2 169 39.1
FAN06G4257 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.3e-11 72.8 122 39.3
FAN19G0644 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.3e-11 72.8 114 40.4
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 5.3e-11 72.8 155 38.1
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 6.9e-11 72.4 160 39.4
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 6.9e-11 72.4 160 39.4
FAN22G1509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-10 71.6 114 37.7
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.2e-10 71.6 154 37.0
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.5e-10 71.2 158 38.0
FAN25G0074 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-10 70.5 112 41.1
FAN25G1938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-10 70.5 139 36.0
FAN28G0938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-10 70.5 139 38.1
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 2.6e-10 70.5 164 36.6
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 4.5e-10 69.7 182 36.8
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 4.5e-10 69.7 158 39.2
FAN11G3668 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.6e-10 68.9 114 39.5
FAN14G5553 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-09 68.2 164 32.3
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 1.3e-09 68.2 161 35.4
FAN10G3390 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.7e-09 67.8 122 36.9
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 1.7e-09 67.8 153 36.6
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 2.9e-09 67.0 129 39.5
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 2.9e-09 67.0 141 38.3
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 3.8e-09 66.6 113 45.1
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 4.9e-09 66.2 157 36.3
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 6.5e-09 65.9 140 39.3
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 8.4e-09 65.5 160 36.2
FAN07G2297 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-08 65.1 103 39.8
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 1.1e-08 65.1 151 35.8
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.1e-08 65.1 163 33.7
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 3.2e-08 63.5 154 35.1
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 3.2e-08 63.5 150 36.0
FvH4_6g16701 Fragaria vesca HOM05D002480 ORTHO05D003145 4.2e-08 63.2 147 35.4
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 5.5e-08 62.8 152 34.9
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 7.1e-08 62.4 155 36.1
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 7.1e-08 62.4 154 35.7
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 7.1e-08 62.4 108 45.4
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 9.3e-08 62.0 139 37.4
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 1.2e-07 61.6 129 38.0
FAN26G1082 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-07 61.6 149 32.9
FvH4_4g09962 Fragaria vesca HOM05D002480 ORTHO05D003145 1.6e-07 61.2 168 29.2
FvH4_1g21331 Fragaria vesca HOM05D002480 ORTHO05D035625 2.1e-07 60.8 116 39.7
FAN05G4537 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.7e-07 60.5 79 44.3
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 3.5e-07 60.1 140 35.0
FvH4_5g23942 Fragaria vesca HOM05D002480 ORTHO05D003145 4.6e-07 59.7 98 40.8
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 7.9e-07 58.9 143 38.5
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 7.9e-07 58.9 150 35.3
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 7.9e-07 58.9 169 36.7
FvH4_5g05871 Fragaria vesca HOM05D002480 ORTHO05D003145 1.0e-06 58.5 114 33.3
FAN18G1209 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-06 58.5 97 38.1
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.0e-06 58.5 140 34.3
FAN11G1925 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-06 57.8 93 35.5
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 2.3e-06 57.4 137 34.3
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 2.3e-06 57.4 144 36.1
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 3.0e-06 57.0 139 39.6
FAN05G5374 Fragaria x ananassa HOM05D002480 ORTHO05D020619 3.0e-06 57.0 53 54.7
FAN28G0175 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.0e-06 57.0 121 35.5
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 3.0e-06 57.0 135 34.8
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 3.0e-06 57.0 138 31.9
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 3.9e-06 56.6 118 36.4
FAN25G1052 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.1e-06 56.2 58 43.1
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 6.7e-06 55.8 137 33.6
FAN05G2680 Fragaria x ananassa HOM05D002480 ORTHO05D020619 8.7e-06 55.5 115 33.0


User provided reference genes

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