Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0963 Fragaria x ananassa HOM05D000410 ORTHO05D002963 2.2e-70 268.9 134 100.0
FAN07G2141 Fragaria x ananassa HOM05D000410 ORTHO05D002963 3.9e-27 125.2 64 93.8
FvH4_3g23840 Fragaria vesca HOM05D000410 ORTHO05D002963 1.9e-26 122.9 95 69.5
FAN11G3527 Fragaria x ananassa HOM05D000410 ORTHO05D002963 1.9e-26 122.9 95 69.5
FAN08G2615 Fragaria x ananassa HOM05D000410 ORTHO05D002963 9.5e-26 120.6 101 66.3
FAN18G0369 Fragaria x ananassa HOM05D000410 ORTHO05D002963 9.5e-26 120.6 101 66.3
FAN04G2418 Fragaria x ananassa HOM05D000410 ORTHO05D002963 1.4e-24 116.7 101 64.4
FAN13G1868 Fragaria x ananassa HOM05D000410 ORTHO05D002963 6.8e-24 114.4 101 64.4
RcHm_v2.0_Chr7g0207871 Rosa chinensis HOM05D000410 ORTHO05D002963 2.7e-20 102.4 115 55.7
FvH4_5g16050 Fragaria vesca HOM05D000410 ORTHO05D002963 7.8e-20 100.9 50 98.0
Prupe.2G192200 Prunus persica HOM05D000410 ORTHO05D002963 3.9e-19 98.6 130 50.8
Prupe.6G165200 Prunus persica HOM05D000410 ORTHO05D002963 3.9e-19 98.6 130 50.8
Prupe.7G181900 Prunus persica HOM05D000410 ORTHO05D002963 3.9e-19 98.6 130 50.8
Prupe.8G197800 Prunus persica HOM05D000410 ORTHO05D002963 3.9e-19 98.6 130 50.8
QL12p007792 Quercus lobata HOM05D000410 ORTHO05D002963 6.2e-17 91.3 104 54.8
Prupe.5G050300 Prunus persica HOM05D000410 ORTHO05D002963 5.2e-16 88.2 112 52.7
MELO3C003360.2 Cucumis melo HOM05D000410 ORTHO05D002963 1.2e-15 87.0 100 52.0
CsaV3_3G049650 Cucumis sativus L. HOM05D000410 ORTHO05D002963 2.0e-15 86.3 100 52.0
Sed0020068 Sechium edule HOM05D000410 ORTHO05D002963 9.9e-15 84.0 49 75.5
Manes.15G171500 Manihot esculenta HOM05D000410 ORTHO05D002963 1.3e-14 83.6 114 46.5
ClCG09G012480 Citrullus lanatus HOM05D000410 ORTHO05D002963 1.7e-14 83.2 101 51.5
CANSAT21G1942 Cannabis sativa HOM05D000410 ORTHO05D002963 2.9e-14 82.4 101 50.5
CiPaw.12G058700 Carya illinoinensis HOM05D000410 ORTHO05D002963 4.9e-14 81.6 108 51.9
Thecc.03G236500 Theobroma cacao HOM05D000410 ORTHO05D002963 1.1e-13 80.5 105 45.7
TWI60G0489 Tripterygium wilfordii HOM05D000410 ORTHO05D002963 1.1e-13 80.5 99 48.5
CsaV3_3G002110 Cucumis sativus L. HOM05D000410 ORTHO05D002963 1.4e-13 80.1 104 52.9
MD06G1043600 Malus domestica HOM05D000410 ORTHO05D002963 3.2e-13 79.0 108 47.2
Potri.001G148600 Populus trichocarpa HOM05D000410 ORTHO05D002963 4.1e-13 78.6 113 46.0
Ciclev10020548m.g Citrus clementina HOM05D000410 ORTHO05D002963 5.4e-13 78.2 44 81.8
TWI81G0043 Tripterygium wilfordii HOM05D000410 ORTHO05D002963 5.4e-13 78.2 99 48.5
CiPaw.11G085800 Carya illinoinensis HOM05D000410 ORTHO05D002963 2.7e-12 75.9 93 53.8
Manes.17G020100 Manihot esculenta HOM05D000410 ORTHO05D002963 3.5e-12 75.5 118 44.1
TAR636G3151 Trochodendron aralioides HOM05D000410 ORTHO05D002963 4.6e-12 75.1 101 47.5
PGR042G2973 Punica granatum HOM05D000410 ORTHO05D002963 1.0e-11 73.9 103 47.6
COL.COLO4_06707 Corchorus olitorius HOM05D000410 ORTHO05D002963 1.7e-11 73.2 106 46.2
THA.LOC104814702 Tarenaya hassleriana HOM05D000410 ORTHO05D002963 1.7e-11 73.2 111 45.9
TAR374G1463 Trochodendron aralioides HOM05D000410 ORTHO05D002963 1.7e-11 73.2 100 46.0
Gohir.A11G029600 Gossypium hirsutum HOM05D000410 ORTHO05D002963 3.0e-11 72.4 99 47.5
Nitab4.5_0001708g0030 Nicotiana tabacum HOM05D000410 ORTHO05D002963 3.0e-11 72.4 112 47.3
Gorai.004G190300 Gossypium raimondii HOM05D000410 ORTHO05D002963 3.9e-11 72.0 100 48.0
Gohir.D11G028100 Gossypium hirsutum HOM05D000410 ORTHO05D002963 5.1e-11 71.6 100 46.0
Sed0019352 Sechium edule HOM05D000410 ORTHO05D002963 5.1e-11 71.6 101 49.5
GSVIVG01013266001 Vitis vinifera HOM05D000410 ORTHO05D002963 5.1e-11 71.6 102 49.0
Duzib068G0858 Durio zibethinus HOM05D000410 ORTHO05D002963 6.6e-11 71.2 96 46.9
Glyma.11G039700 Glycine max HOM05D000410 ORTHO05D002963 6.6e-11 71.2 103 49.5
Peaxi162Scf00084g00027 Petunia axillaris HOM05D000410 ORTHO05D002963 6.6e-11 71.2 59 64.4
Sed0015081 Sechium edule HOM05D000410 ORTHO05D002963 6.6e-11 71.2 100 46.0
Eucgr.E00327 Eucalyptus grandis HOM05D000410 ORTHO05D002963 1.1e-10 70.5 101 44.6
Gohir.A08G161400 Gossypium hirsutum HOM05D000410 ORTHO05D002963 1.1e-10 70.5 100 47.0
Cfa012361 Carpinus fangiana HOM05D000410 ORTHO05D002963 1.5e-10 70.1 108 49.1
Nitab4.5_0007226g0020 Nicotiana tabacum HOM05D000410 ORTHO05D002963 1.5e-10 70.1 113 46.9
CSS0004938 Camellia sinensis var. sinensis HOM05D000410 ORTHO05D002963 1.9e-10 69.7 108 48.1
Gohir.D08G181300 Gossypium hirsutum HOM05D000410 ORTHO05D002963 1.9e-10 69.7 100 47.0
Hma1.2p1_0414F.1_g147550 Hydrangea macrophylla HOM05D000410 ORTHO05D002963 1.9e-10 69.7 107 45.8
Haze_08322 Corylus avellana HOM05D000410 ORTHO05D002963 2.5e-10 69.3 110 48.2
Dinv28900 Davidia involucrata HOM05D000410 ORTHO05D002963 3.3e-10 68.9 107 47.7
Lj2g0008503 Lotus japonicus HOM05D000410 ORTHO05D002963 4.3e-10 68.6 104 46.2
PGSC0003DMG400001841 Solanum tuberosum HOM05D000410 ORTHO05D002963 5.6e-10 68.2 114 45.6
Gorai.008G229800 Gossypium raimondii HOM05D000410 ORTHO05D002963 7.3e-10 67.8 100 42.0
Solyc08g077460.3 Solanum lycopersicum HOM05D000410 ORTHO05D002963 7.3e-10 67.8 112 46.4
Sopen08g026050 Solanum pennellii HOM05D000410 ORTHO05D002963 7.3e-10 67.8 112 46.4
MELO3C013883.2 Cucumis melo HOM05D000410 ORTHO05D002963 9.6e-10 67.4 109 45.9
Hma1.2p1_0311F.1_g121150 Hydrangea macrophylla HOM05D000410 ORTHO05D002963 9.6e-10 67.4 110 43.6
Nn1g00692 Nelumbo nucifera HOM05D000410 ORTHO05D002963 1.2e-09 67.0 105 47.6
Lalb_Chr05g0220741 Lupinus albus HOM05D000410 ORTHO05D002963 1.6e-09 66.6 99 46.5
EL10Ac5g12214 Beta vulgaris HOM05D000410 ORTHO05D002963 2.1e-09 66.2 48 70.8
Potri.003G085800 Populus trichocarpa HOM05D000410 ORTHO05D002963 2.1e-09 66.2 40 82.5
Lalb_Chr05g0214161 Lupinus albus HOM05D000410 ORTHO05D002963 3.6e-09 65.5 87 50.6
Gorai.007G030800 Gossypium raimondii HOM05D000410 ORTHO05D002963 4.7e-09 65.1 100 44.0
Actinidia03400 Actinidia chinensis HOM05D000410 ORTHO05D002963 6.2e-09 64.7 56 62.5
FAN14G3035 Fragaria x ananassa HOM05D004096 ORTHO05D000898 8.1e-09 64.3 39 76.9
Glyma.01G203300 Glycine max HOM05D000410 ORTHO05D002963 1.1e-08 63.9 100 49.0
Gohir.A12G211700 Gossypium hirsutum HOM05D000410 ORTHO05D002963 1.1e-08 63.9 100 42.0
FvH4_7g05770 Fragaria vesca HOM05D004096 ORTHO05D000898 1.4e-08 63.5 40 80.0
FvH4_7g12251 Fragaria vesca HOM05D004096 ORTHO05D000898 1.4e-08 63.5 40 80.0
PSO782G0633 Papaver somniferum HOM05D000410 ORTHO05D002963 1.4e-08 63.5 114 40.4
ClCG10G002020 Citrullus lanatus HOM05D000410 ORTHO05D002963 1.8e-08 63.2 106 46.2
Actinidia34403 Actinidia chinensis HOM05D000410 ORTHO05D002963 2.4e-08 62.8 55 61.8
FAN09G2456 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.4e-08 62.8 39 76.9
Nitab4.5_0000185g0300 Nicotiana tabacum HOM05D000410 ORTHO05D002963 2.4e-08 62.8 59 59.3
PSO063G3541 Papaver somniferum HOM05D000410 ORTHO05D002963 5.2e-08 61.6 117 41.0
FvH4_5g19752 Fragaria vesca HOM05D004096 ORTHO05D000898 6.8e-08 61.2 46 69.6
Glyma.05G068400 Glycine max HOM05D000410 ORTHO05D002963 6.8e-08 61.2 121 41.3
Lj4g0007315 Lotus japonicus HOM05D000410 ORTHO05D002963 6.8e-08 61.2 110 47.3
Lalb_Chr09g0329641 Lupinus albus HOM05D000410 ORTHO05D002963 6.8e-08 61.2 45 71.1
Hund14452 Selenicereus undatus HOM05D000410 ORTHO05D002963 8.9e-08 60.8 62 56.5
Lalb_Chr09g0324001 Lupinus albus HOM05D000410 ORTHO05D002963 1.5e-07 60.1 101 45.5
Peaxi162Scf00190g00029 Petunia axillaris HOM05D000410 ORTHO05D002963 2.0e-07 59.7 105 41.9
Actinidia34414 Actinidia chinensis HOM05D060695 ORTHO05D002963 3.4e-07 58.9 55 60.0
Eucgr.D02146 Eucalyptus grandis HOM05D000410 ORTHO05D002963 3.4e-07 58.9 95 47.4
Gohir.D12G214200 Gossypium hirsutum HOM05D000410 ORTHO05D002963 4.4e-07 58.5 100 40.0
Glyma.17G150900 Glycine max HOM05D000410 ORTHO05D002963 9.9e-07 57.4 48 66.7
AL1G47020 Arabidopsis lyrata HOM05D000410 ORTHO05D002963 1.3e-06 57.0 100 44.0
DCAR_008308 Daucus carota HOM05D000410 ORTHO05D002963 1.3e-06 57.0 48 58.3
Nitab4.5_0000506g0240 Nicotiana tabacum HOM05D000410 ORTHO05D002963 1.7e-06 56.6 115 40.9
Actinidia23304 Actinidia chinensis HOM05D000410 ORTHO05D002963 2.2e-06 56.2 51 60.8
Gohir.A03G003100 Gossypium hirsutum HOM05D000410 ORTHO05D002963 2.2e-06 56.2 108 38.0
Phvul.002G002700 Phaseolus vulgaris HOM05D000410 ORTHO05D002963 2.9e-06 55.8 99 42.4
Peaxi162Scf00102g00731 Petunia axillaris HOM05D000410 ORTHO05D002963 3.8e-06 55.5 56 57.1
Ah.12g053780 Amaranthus hybridus HOM05D000410 ORTHO05D002963 4.9e-06 55.1 112 37.5
Gohir.D03G169300 Gossypium hirsutum HOM05D000410 ORTHO05D002963 4.9e-06 55.1 108 37.0
SHI07578 Sapria himalayana HOM05D000410 ORTHO05D002963 8.4e-06 54.3 43 60.5


User provided reference genes

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