Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0868 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.2e-205 718.8 374 100.0
FAN17G1075 Fragaria x ananassa HOM05D003379 ORTHO05D003862 6.9e-199 697.2 374 97.6
FvH4_4g22730 Fragaria vesca HOM05D003379 ORTHO05D003862 1.2e-187 659.8 374 93.9
FAN12G1414 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.0e-186 656.8 374 93.3
RcHm_v2.0_Chr4g0428951 Rosa chinensis HOM05D003379 ORTHO05D003862 5.9e-166 587.8 382 83.5
Prupe.1G216200 Prunus persica HOM05D003379 ORTHO05D003862 8.1e-99 364.8 397 59.4
MD13G1129900 Malus domestica HOM05D003379 ORTHO05D003862 1.8e-77 293.9 386 50.3
Haze_12496 Corylus avellana HOM05D003379 ORTHO05D003862 1.6e-75 287.3 427 45.9
CiPaw.06G109000 Carya illinoinensis HOM05D003379 ORTHO05D003862 4.2e-71 272.7 432 44.0
QL03p049546 Quercus lobata HOM05D003379 ORTHO05D003862 5.1e-69 265.8 431 43.9
Dinv19304 Davidia involucrata HOM05D003379 ORTHO05D003862 6.2e-67 258.8 449 42.3
TAR475G0001 Trochodendron aralioides HOM05D003379 ORTHO05D003862 2.2e-64 250.4 442 40.7
Atru.chr12.1405 Acer truncatum HOM05D003379 ORTHO05D003862 3.8e-64 249.6 438 44.3
Cfa009444 Carpinus fangiana HOM05D003379 ORTHO05D003862 8.4e-64 248.4 543 37.4
Dinv01473 Davidia involucrata HOM05D003379 ORTHO05D003862 1.9e-63 247.3 433 42.5
TAR374G0325 Trochodendron aralioides HOM05D003379 ORTHO05D003862 3.5e-62 243.0 448 41.5
TWI75G1860 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 2.3e-61 240.4 429 42.2
Ciclev10005064m.g Citrus clementina HOM05D003379 ORTHO05D003862 1.9e-60 237.3 423 43.5
Potri.003G163100 Populus trichocarpa HOM05D003379 ORTHO05D003862 2.8e-59 233.4 444 40.8
Actinidia30590 Actinidia chinensis HOM05D003379 ORTHO05D003862 5.3e-58 229.2 431 39.7
Actinidia22119 Actinidia chinensis HOM05D003379 ORTHO05D003862 2.0e-57 227.3 430 41.9
COL.COLO4_21771 Corchorus olitorius HOM05D003379 ORTHO05D003862 2.2e-56 223.8 438 39.0
Sabra03G0118600 Salix brachista HOM05D003379 ORTHO05D003862 2.2e-56 223.8 439 40.1
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 2.5e-55 220.3 457 39.2
Gorai.005G196800 Gossypium raimondii HOM05D003379 ORTHO05D003862 6.1e-54 215.7 437 39.6
Rhsim12G0017700 Rhododendron simsii HOM05D003379 ORTHO05D003862 6.1e-54 215.7 436 37.8
TWI36G1473 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 7.9e-54 215.3 434 40.1
Duzib132G1102 Durio zibethinus HOM05D003379 ORTHO05D003862 3.9e-53 213.0 437 40.0
Gohir.D02G175200 Gossypium hirsutum HOM05D003379 ORTHO05D003862 5.1e-53 212.6 436 39.2
Manes.08G101800 Manihot esculenta HOM05D003379 ORTHO05D003862 1.5e-52 211.1 438 41.1
CSS0045312 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 6.3e-51 205.7 375 39.7
Thecc.02G193300 Theobroma cacao HOM05D003379 ORTHO05D003862 1.1e-50 204.9 440 40.2
Sc17g0006750 Simmondsia chinensis HOM05D003379 ORTHO05D003862 6.9e-50 202.2 432 38.0
Dinv25618 Davidia involucrata HOM05D003379 ORTHO05D003862 1.9e-47 194.1 452 35.0
MBI07_g41898_MAGBIO Magnolia biondii HOM05D003379 ORTHO05D003862 3.2e-47 193.4 448 35.5
AUR62014693 Chenopodium quinoa HOM05D003379 ORTHO05D003862 5.5e-47 192.6 386 38.3
THA.LOC104825464 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 7.2e-47 192.2 425 36.9
PGR142G1656 Punica granatum HOM05D003379 ORTHO05D003862 1.6e-46 191.0 438 34.9
Aqoxy6G00186 Aquilegia oxysepala HOM05D003379 ORTHO05D003862 4.7e-46 189.5 456 34.2
Hund23589 Selenicereus undatus HOM05D003379 ORTHO05D003862 4.7e-46 189.5 443 34.5
Ah.09g236390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 7.9e-46 188.7 438 37.2
THA.LOC104825281 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 1.4e-45 188.0 433 37.4
CDE05G0540 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 3.0e-45 186.8 416 33.4
Manes.11G076800 Manihot esculenta HOM05D003379 ORTHO05D003862 8.8e-45 185.3 454 34.6
Cpa.g.sc70.68 Carica papaya HOM05D003379 ORTHO05D003862 1.5e-44 184.5 456 34.6
QL02p069539 Quercus lobata HOM05D003379 ORTHO05D003862 2.0e-44 184.1 447 35.1
MELO3C014781.2 Cucumis melo HOM05D003379 ORTHO05D003862 3.3e-44 183.3 435 35.2
MSTRG.2062 Avicennia marina HOM05D003379 ORTHO05D003862 9.7e-44 181.8 447 32.4
ClCG05G012630 Citrullus lanatus HOM05D003379 ORTHO05D003862 9.7e-44 181.8 446 34.3
Nn4g22138 Nelumbo nucifera HOM05D003379 ORTHO05D003862 1.3e-43 181.4 424 37.5
EL10Ac8g20553 Beta vulgaris HOM05D003379 ORTHO05D003862 3.1e-42 176.8 429 34.0
Lj7A617T72 Lonicera japonica HOM05D003379 ORTHO05D003862 9.1e-42 175.3 448 34.6
CDE05G1535 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 1.5e-41 174.5 419 32.9
Manes.09G187602 Manihot esculenta HOM05D003379 ORTHO05D003862 2.0e-41 174.1 420 36.9
Cfa007165 Carpinus fangiana HOM05D003379 ORTHO05D003862 2.6e-41 173.7 447 33.8
Potri.014G143800 Populus trichocarpa HOM05D003379 ORTHO05D003862 4.5e-41 172.9 449 33.4
vmacro18379 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 4.5e-41 172.9 454 34.4
Rhsim08G0039200 Rhododendron simsii HOM05D003379 ORTHO05D003862 1.0e-40 171.8 321 39.6
Sed0002814 Sechium edule HOM05D003379 ORTHO05D003862 1.3e-40 171.4 441 34.2
Migut.E00693 Erythranthe guttata HOM05D003379 ORTHO05D003862 2.2e-40 170.6 443 34.8
PSO017G0829 Papaver somniferum HOM05D003379 ORTHO05D003862 5.0e-40 169.5 445 34.2
Sed0021165 Sechium edule HOM05D003379 ORTHO05D003862 5.0e-40 169.5 449 33.6
Duzib187G1855 Durio zibethinus HOM05D003379 ORTHO05D003862 6.5e-40 169.1 445 33.7
PSO478G4908 Papaver somniferum HOM05D003379 ORTHO05D003862 6.5e-40 169.1 449 35.4
C09p63750 Brassica napus HOM05D003379 ORTHO05D003862 1.9e-39 167.5 342 39.8
Actinidia36245 Actinidia chinensis HOM05D003379 ORTHO05D003862 2.5e-39 167.2 439 34.2
Peaxi162Scf00171g00621 Petunia axillaris HOM05D003379 ORTHO05D003862 2.5e-39 167.2 419 35.6
Aa31LG3G14350 Aethionema arabicum HOM05D003379 ORTHO05D003862 3.2e-39 166.8 426 35.7
Sopen04g017060 Solanum pennellii HOM05D003379 ORTHO05D003862 3.2e-39 166.8 406 36.0
vmacro01023 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 3.2e-39 166.8 433 35.1
CsaV3_3G027780 Cucumis sativus L. HOM05D003379 ORTHO05D003862 4.2e-39 166.4 439 33.0
BraA10t44552Z Brassica rapa HOM05D003379 ORTHO05D003862 7.2e-39 165.6 365 37.3
Atru.chr6.2693 Acer truncatum HOM05D003379 ORTHO05D003862 9.4e-39 165.2 436 34.2
Ciclev10015333m.g Citrus clementina HOM05D003379 ORTHO05D003862 1.2e-38 164.9 449 33.4
COL.COLO4_13374 Corchorus olitorius HOM05D003379 ORTHO05D003862 1.2e-38 164.9 448 33.3
VMungo1383G3656 Vigna mungo HOM05D003379 ORTHO05D003862 1.2e-38 164.9 427 36.5
EL10Ac6g13403 Beta vulgaris HOM05D003379 ORTHO05D003862 1.6e-38 164.5 493 32.9
Haze_14949 Corylus avellana HOM05D003379 ORTHO05D003862 1.6e-38 164.5 452 33.8
Gohir.A03G152100 Gossypium hirsutum HOM05D003379 ORTHO05D003862 1.6e-38 164.5 311 40.2
TWI32G0366 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 2.7e-38 163.7 436 34.9
ECA234G2936 Erigeron canadensis HOM05D003379 ORTHO05D003862 4.7e-38 162.9 383 35.8
A10p24890 Brassica napus HOM05D003379 ORTHO05D003862 8.0e-38 162.2 345 37.7
PGSC0003DMG400004243 Solanum tuberosum HOM05D003379 ORTHO05D003862 1.0e-37 161.8 413 35.8
HanXRQChr12g0384731 Helianthus annuus HOM05D003379 ORTHO05D003862 1.4e-37 161.4 381 37.8
BcaC04g19123 Brassica carinata HOM05D003379 ORTHO05D003862 1.8e-37 161.0 416 36.5
Thecc.04G047800 Theobroma cacao HOM05D003379 ORTHO05D003862 1.8e-37 161.0 452 34.5
MD09G1002700 Malus domestica HOM05D003379 ORTHO05D003862 2.3e-37 160.6 441 33.6
Nitab4.5_0005424g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 2.3e-37 160.6 404 33.9
CAN.G7.8 Capsicum annuum HOM05D003379 ORTHO05D003862 5.2e-37 159.5 413 34.4
Solyc04g024520.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 1.1e-36 158.3 406 35.5
Ca_08145_v3 Cicer arietinum L. HOM05D003379 ORTHO05D003862 2.6e-36 157.1 426 34.7
Thhalv10013755m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 2.6e-36 157.1 419 34.1
Lalb_Chr14g0364121 Lupinus albus HOM05D003379 ORTHO05D003862 2.6e-36 157.1 431 34.1
Nitab4.5_0002116g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 2.6e-36 157.1 417 34.3
Gorai.001G276100 Gossypium raimondii HOM05D003379 ORTHO05D003862 4.4e-36 156.4 452 32.5
GSVIVG01001080001 Vitis vinifera HOM05D003379 ORTHO05D003862 7.4e-36 155.6 411 34.5
HPP92_027984 Vanilla planifolia HOM05D003379 ORTHO05D003862 1.7e-35 154.5 365 35.1
Gohir.D07G239900 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.8e-35 153.7 454 31.7
Medtr7g084070 Medicago truncatula HOM05D003379 ORTHO05D003862 2.8e-35 153.7 392 34.9
Sabra02G0181500 Salix brachista HOM05D003379 ORTHO05D003862 2.8e-35 153.7 441 32.7
Gohir.A07G232700 Gossypium hirsutum HOM05D003379 ORTHO05D003862 4.8e-35 152.9 452 31.9
Sp6g30680 Schrenkiella parvula HOM05D003379 ORTHO05D003862 4.8e-35 152.9 414 33.6
Sc03g0005220 Simmondsia chinensis HOM05D003379 ORTHO05D003862 6.3e-35 152.5 428 34.6
AUR62017428 Chenopodium quinoa HOM05D003379 ORTHO05D003862 1.1e-34 151.8 331 38.1
Eucgr.I02446 Eucalyptus grandis HOM05D003379 ORTHO05D003862 4.1e-34 149.8 466 31.3
Phvul.001G084300 Phaseolus vulgaris HOM05D003379 ORTHO05D003862 4.1e-34 149.8 431 33.6
ATR0582G197 Amborella trichopoda HOM05D003379 ORTHO05D003862 7.0e-34 149.1 442 31.4
CiPaw.04G001500 Carya illinoinensis HOM05D003379 ORTHO05D003862 7.0e-34 149.1 349 37.2
Potri.002G238100 Populus trichocarpa HOM05D003379 ORTHO05D003862 7.0e-34 149.1 443 32.1
MD17G1006900 Malus domestica HOM05D003379 ORTHO05D003862 9.1e-34 148.7 436 32.1
Lj1g0011786 Lotus japonicus HOM05D003379 ORTHO05D003862 2.0e-33 147.5 457 32.2
AUR62037825 Chenopodium quinoa HOM05D003379 ORTHO05D003862 2.6e-33 147.1 329 38.9
SGA_v2.0_scaffold306G48013 Striga asiatica HOM05D003379 ORTHO05D003862 3.5e-33 146.7 449 29.4
FAN09G0861 Fragaria x ananassa HOM05D003379 ORTHO05D003862 4.5e-33 146.4 433 33.0
FvH4_6g54290 Fragaria vesca HOM05D003379 ORTHO05D003862 5.9e-33 146.0 435 32.9
Cc07_g01280 Coffea canephora HOM05D003379 ORTHO05D003862 7.7e-33 145.6 497 29.8
CARHR200130 Cardamine hirsuta HOM05D003379 ORTHO05D003862 1.3e-32 144.8 422 34.6
C09p63160 Brassica napus HOM05D003379 ORTHO05D003862 2.9e-32 143.7 414 32.6
BolC9t59151H Brassica oleracea HOM05D003379 ORTHO05D003862 2.9e-32 143.7 412 31.3
Psat3g093320 Pisum sativum HOM05D003379 ORTHO05D003862 3.8e-32 143.3 426 33.1
A10p24430 Brassica napus HOM05D003379 ORTHO05D003862 8.5e-32 142.1 416 33.2
FAN14G1380 Fragaria x ananassa HOM05D003379 ORTHO05D003862 8.5e-32 142.1 435 32.6
Ah.03g136390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 1.1e-31 141.7 478 31.2
Glyma.19G103400 Glycine max HOM05D003379 ORTHO05D003862 1.9e-31 141.0 434 32.0
AL6G23930 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 4.2e-31 139.8 411 33.1
BraA10t44509Z Brassica rapa HOM05D003379 ORTHO05D003862 4.2e-31 139.8 415 33.0
Carub.0006s1148 Capsella rubella HOM05D003379 ORTHO05D003862 7.2e-31 139.0 413 31.5
Thhalv10013725m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 1.6e-30 137.9 426 32.4
DCAR_002970 Daucus carota HOM05D003379 ORTHO05D003862 3.6e-30 136.7 435 31.7
AT5G13310 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 4.7e-30 136.3 410 33.4
AUR62012502 Chenopodium quinoa HOM05D003379 ORTHO05D003862 6.1e-30 136.0 310 37.4
Prupe.3G313500 Prunus persica HOM05D003379 ORTHO05D003862 6.1e-30 136.0 454 30.6
Zm00001eb421370 Zea mays HOM05D003379 ORTHO05D003862 1.4e-29 134.8 449 29.8
Zm00001eb084870 Zea mays HOM05D003379 ORTHO05D003862 4.0e-29 133.3 451 29.5
Sp6g30030 Schrenkiella parvula HOM05D003379 ORTHO05D003862 5.2e-29 132.9 423 31.7
FAN05G5138 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.0e-28 131.0 431 31.1
Lsat_1_v5_gn_4_1521 Lactuca sativa HOM05D003379 ORTHO05D003862 2.6e-28 130.6 304 36.8
SalBow6G5409 Salvia bowleyana HOM05D003379 ORTHO05D003862 3.4e-28 130.2 325 35.7
Glyma.16G047900 Glycine max HOM05D003379 ORTHO05D003862 7.5e-28 129.0 435 32.4
Hund04187 Selenicereus undatus HOM05D003379 ORTHO05D003862 7.5e-28 129.0 472 30.3
Duzib147G0361 Durio zibethinus HOM05D003379 ORTHO05D003862 3.7e-27 126.7 371 32.1
Carub.0006s1216 Capsella rubella HOM05D003379 ORTHO05D003862 6.3e-27 125.9 430 31.2
Nitab4.5_0001409g0240 Nicotiana tabacum HOM05D000225 ORTHO05D001595 8.3e-27 125.6 414 29.2
Lalb_Chr22g0359971 Lupinus albus HOM05D003379 ORTHO05D003862 1.1e-26 125.2 441 31.5
Oeu027918.1 Olea europaea HOM05D003379 ORTHO05D003862 2.0e-25 120.9 429 29.1
Aa31LG11G15410 Aethionema arabicum HOM05D003379 ORTHO05D003862 7.7e-25 119.0 435 29.0
AL6G24630 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 1.3e-24 118.2 421 30.4
AT5G13970 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 2.9e-24 117.1 430 30.2
Sopen02g036510 Solanum pennellii HOM05D003379 ORTHO05D003862 3.8e-24 116.7 419 29.1
CSS0018885 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 5.0e-24 116.3 282 34.4
CSS0041611 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 5.0e-24 116.3 464 28.7
Nitab4.5_0007209g0030 Nicotiana tabacum HOM05D000225 ORTHO05D001595 5.0e-24 116.3 388 28.6
CANSAT64G2275 Cannabis sativa HOM05D003379 ORTHO05D003862 1.1e-23 115.2 431 29.5
arahy.Tifrunner.gnm1.ann1.JRYW6U Arachis hypogaea HOM05D003379 ORTHO05D003862 5.5e-23 112.8 445 31.7
Solyc02g091940.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 7.2e-23 112.5 419 28.6
CARHR199420 Cardamine hirsuta HOM05D003379 ORTHO05D003862 6.1e-22 109.4 250 37.6
Lj6P837T11 Lonicera japonica HOM05D003379 ORTHO05D003862 8.0e-22 109.0 161 44.7
HPP92_006450 Vanilla planifolia HOM05D003379 ORTHO05D003862 5.2e-21 106.3 293 33.1
unitig_22.g5626 Utricularia gibba HOM05D003379 ORTHO05D003862 6.8e-21 105.9 390 28.7
Lsat_1_v5_gn_0_41321 Lactuca sativa HOM05D003379 ORTHO05D003862 7.5e-20 102.4 437 26.3
arahy.Tifrunner.gnm1.ann1.M1DIX9 Arachis hypogaea HOM05D003379 ORTHO05D003862 1.3e-19 101.7 445 30.3
SMO117G0242 Selaginella moellendorffii HOM05D002493 ORTHO05D003175 2.2e-19 100.9 400 29.0
ECA246G3772 Erigeron canadensis HOM05D003379 ORTHO05D003862 4.8e-19 99.8 455 28.1
PGSC0003DMG400021424 Solanum tuberosum HOM05D003379 ORTHO05D003862 1.2e-17 95.1 417 26.9
BcaNung03374 Brassica carinata HOM05D003379 ORTHO05D003862 1.7e-16 91.3 175 40.0
Cpa.g.sc38.89 Carica papaya HOM05D003379 ORTHO05D003862 1.7e-16 91.3 179 40.8
Pp3c5_23700 Physcomitrium patens HOM05D003379 ORTHO05D003862 2.3e-16 90.9 353 30.3
CAN.G1061.1 Capsicum annuum HOM05D003379 ORTHO05D003862 2.9e-16 90.5 415 28.0
HanXRQChr17g0550921 Helianthus annuus HOM05D003379 ORTHO05D003862 1.6e-14 84.7 206 34.0
Ah.14g088790 Amaranthus hybridus HOM05D003379 ORTHO05D003862 9.8e-12 75.5 186 36.0
BcaC04g20129 Brassica carinata HOM05D003379 ORTHO05D003862 2.4e-10 70.9 173 36.4
BolC7t42848H Brassica oleracea HOM05D003379 ORTHO05D003862 9.2e-10 68.9 185 34.6
AagrBONN_evm.TU.Sc2ySwM_369.605 Anthoceros agrestis HOM05D003379 ORTHO05D003862 7.8e-09 65.9 286 29.0
RcHm_v2.0_Chr3g0475791 Rosa chinensis HOM05D003379 ORTHO05D003862 2.3e-08 64.3 356 26.1
Mapoly0001s0546 Marchantia polymorpha HOM05D003379 ORTHO05D003862 3.3e-07 60.5 400 26.0
BcaC01g02664 Brassica carinata HOM05D003379 ORTHO05D003862 1.2e-06 58.5 71 45.1
BolC3t18480H Brassica oleracea HOM05D003379 ORTHO05D003862 2.1e-06 57.8 71 45.1


User provided reference genes

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