Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.0e-204 716.5 352 100.0
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 9.0e-201 703.4 352 98.0
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 1.4e-198 696.0 352 97.4
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.4e-198 696.0 352 97.4
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 5.5e-182 641.0 355 90.7
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 5.9e-168 594.3 364 82.4
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 3.2e-166 588.6 362 82.6
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 8.5e-159 563.9 353 80.2
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 2.7e-157 558.9 353 79.6
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 2.7e-157 558.9 363 76.9
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 1.4e-153 546.6 355 75.8
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 1.4e-153 546.6 355 76.3
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 4.1e-153 545.0 355 75.8
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 5.4e-153 544.7 358 75.1
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 7.0e-153 544.3 361 75.3
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 2.7e-152 542.3 356 74.4
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 1.7e-151 539.7 362 75.4
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 2.3e-151 539.3 362 74.3
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 8.6e-151 537.3 356 75.3
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 1.2e-149 533.5 366 75.4
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 4.7e-149 531.6 365 74.0
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 8.0e-149 530.8 368 74.7
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 2.3e-148 529.3 354 73.2
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 6.8e-148 527.7 361 72.9
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 3.4e-147 525.4 364 73.6
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 5.7e-147 524.6 358 72.9
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 9.8e-147 523.9 363 73.6
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 9.8e-147 523.9 363 73.6
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 1.7e-146 523.1 356 73.3
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 4.9e-146 521.5 356 74.7
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 6.4e-146 521.2 361 72.0
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 1.4e-145 520.0 355 74.4
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 2.4e-145 519.2 365 72.6
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 3.2e-145 518.8 372 71.8
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 3.2e-145 518.8 364 72.8
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 4.1e-145 518.5 362 74.0
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 4.1e-145 518.5 363 72.5
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 5.4e-145 518.1 361 73.1
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 1.6e-144 516.5 357 72.3
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 2.7e-144 515.8 357 72.0
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 3.5e-144 515.4 370 70.0
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 1.0e-143 513.8 369 70.2
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 1.0e-143 513.8 377 71.1
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 1.0e-143 513.8 362 71.0
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 1.3e-143 513.5 359 71.9
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 2.3e-143 512.7 367 70.0
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 2.9e-143 512.3 370 69.7
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 2.9e-143 512.3 370 69.7
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 2.9e-143 512.3 356 72.2
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 3.9e-143 511.9 363 73.6
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 6.6e-143 511.1 355 73.8
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 8.6e-143 510.8 359 71.6
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 8.6e-143 510.8 370 69.7
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 1.9e-142 509.6 355 72.1
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 2.5e-142 509.2 359 70.8
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 3.3e-142 508.8 382 70.7
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 3.3e-142 508.8 382 70.7
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 3.3e-142 508.8 361 70.9
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 7.3e-142 507.7 361 69.8
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 9.5e-142 507.3 357 70.3
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 1.6e-141 506.5 369 69.1
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.6e-141 505.4 353 70.3
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 1.0e-140 503.8 361 72.0
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 1.0e-140 503.8 354 70.6
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 6.8e-140 501.1 352 69.9
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 8.9e-140 500.7 352 70.7
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 3.4e-139 498.8 362 68.5
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 9.8e-139 497.3 352 71.0
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 2.9e-138 495.7 358 68.7
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 3.7e-138 495.4 381 66.9
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 7.0e-137 491.1 352 69.0
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 7.0e-137 491.1 352 69.0
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 2.7e-136 489.2 303 78.2
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 3.5e-136 488.8 352 68.8
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 7.8e-136 487.6 333 75.1
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 3.0e-135 485.7 367 67.6
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 5.0e-135 485.0 352 68.5
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 5.0e-135 485.0 368 67.1
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 5.0e-135 485.0 356 68.5
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 6.6e-135 484.6 438 60.3
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 4.3e-134 481.9 329 73.3
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.6e-133 478.8 314 73.6
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 3.6e-133 478.8 371 66.3
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 6.2e-133 478.0 360 67.5
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 1.4e-132 476.9 353 67.7
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 1.4e-132 476.9 355 68.5
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 1.4e-132 476.9 356 66.6
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 1.4e-132 476.9 349 67.9
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 9.8e-131 470.7 356 66.9
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 1.7e-130 469.9 357 66.9
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 1.9e-129 466.5 327 73.1
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 2.1e-128 463.0 356 66.0
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 1.0e-127 460.7 358 63.4
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 2.5e-126 456.1 324 72.5
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 7.3e-126 454.5 356 64.9
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 9.5e-126 454.1 352 63.9
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 2.8e-125 452.6 352 65.6
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 9.9e-123 444.1 361 62.9
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 4.9e-122 441.8 352 62.2
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 4.9e-122 441.8 361 63.2
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 1.4e-121 440.3 335 66.9
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 2.4e-121 439.5 364 62.6
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 9.2e-121 437.6 364 62.4
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 1.7e-119 433.3 364 61.3
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 1.9e-118 429.9 287 76.3
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 1.8e-116 423.3 296 68.9
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 2.0e-115 419.9 352 61.1
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 2.1e-112 409.8 295 73.2
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 3.3e-110 402.5 294 72.1
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 6.9e-108 394.8 342 57.3
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 2.4e-105 386.3 353 56.7
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 7.1e-105 384.8 297 62.3
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 5.1e-103 378.6 325 61.5
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 1.4e-100 370.5 365 54.8
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 2.0e-99 366.7 228 77.6
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 2.0e-99 366.7 194 86.1
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 7.6e-99 364.8 194 87.1
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 2.1e-96 356.7 355 54.4
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 1.8e-95 353.6 357 52.4
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 6.7e-95 351.7 330 53.6
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 6.7e-95 351.7 194 84.5
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 1.1e-94 350.9 293 59.7
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 2.5e-94 349.7 338 54.7
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 3.7e-93 345.9 350 52.0
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 6.5e-90 335.1 296 53.0
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 1.1e-68 264.6 153 79.7
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.3e-63 246.9 126 88.1
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 2.6e-62 243.4 210 58.6
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 3.2e-49 199.9 207 52.7
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 2.3e-47 193.7 100 89.0
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.5e-43 179.9 90 88.9
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 5.9e-43 179.1 187 54.0
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 1.3e-42 177.9 142 69.7
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 2.3e-31 140.6 234 43.6
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 1.2e-30 138.3 101 70.3
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 6.4e-29 132.5 88 70.5
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.4e-28 130.6 160 50.0
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 1.2e-27 128.3 147 47.6
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 7.8e-27 125.6 73 74.0
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 1.3e-26 124.8 73 74.0
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 3.7e-13 80.1 125 40.0
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 9.2e-12 75.5 43 76.7
Actinidia05457 Actinidia chinensis HOM05D005688 ORTHO05D054920 5.2e-07 59.7 72 50.0


User provided reference genes

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