Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0678 Fragaria x ananassa HOM05D010815 ORTHO05D011855 2.3e-72 275.4 131 100.0
FvH4_4g05670 Fragaria vesca HOM05D005430 ORTHO05D007814 6.2e-70 267.3 127 98.4
FAN17G1087 Fragaria x ananassa HOM05D005430 ORTHO05D007814 1.8e-69 265.8 127 97.6
FAN12G1989 Fragaria x ananassa HOM05D010815 ORTHO05D011855 8.9e-69 263.5 127 96.9
RcHm_v2.0_Chr4g0396871 Rosa chinensis HOM05D010815 ORTHO05D011855 3.1e-61 238.4 132 84.1
Prupe.1G060200 Prunus persica HOM05D010815 ORTHO05D011855 8.7e-24 114.0 88 60.2
Ciclev10007012m.g Citrus clementina HOM05D010815 ORTHO05D011855 5.1e-16 88.2 130 36.2
Eucgr.H00099 Eucalyptus grandis HOM05D010815 ORTHO05D011855 1.1e-15 87.0 102 39.2
Duzib147G1057 Durio zibethinus HOM05D010815 ORTHO05D011855 5.7e-15 84.7 133 38.3
Gohir.A12G078544 Gossypium hirsutum HOM05D010815 ORTHO05D011855 6.3e-14 81.3 125 37.6
Nn1g03102 Nelumbo nucifera HOM05D000256 ORTHO05D000119 1.1e-13 80.5 103 34.0
Rhsim02G0053100 Rhododendron simsii HOM05D016215 ORTHO05D011855 1.8e-13 79.7 141 36.2
CANSAT21G1227 Cannabis sativa HOM05D000256 ORTHO05D000119 2.4e-13 79.3 103 36.9
Gorai.008G102800 Gossypium raimondii HOM05D010815 ORTHO05D011855 4.1e-13 78.6 125 38.4
Gohir.D12G094450 Gossypium hirsutum HOM05D010815 ORTHO05D011855 5.3e-13 78.2 125 38.4
Nn1g08718 Nelumbo nucifera HOM05D000256 ORTHO05D000119 5.3e-13 78.2 136 34.6
SGA_v2.0_scaffold57G20171 Striga asiatica HOM05D000256 ORTHO05D000119 1.5e-12 76.6 106 36.8
Thhalv10022037m.g Eutrema salsugineum HOM05D010815 ORTHO05D011855 7.6e-12 74.3 127 38.6
Rhsim02G0053000 Rhododendron simsii HOM05D016215 ORTHO05D011855 1.7e-11 73.2 141 34.8
Oeu009572.1 Olea europaea HOM05D000256 ORTHO05D000119 2.2e-11 72.8 88 36.4
PSO210G4725 Papaver somniferum HOM05D000256 ORTHO05D000119 5.0e-11 71.6 107 34.6
SalBow4G2587 Salvia bowleyana HOM05D000256 ORTHO05D000119 8.4e-11 70.9 93 34.4
Migut.G00616 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.1e-10 70.5 107 33.6
Prupe.4G273700 Prunus persica HOM05D015853 ORTHO05D000119 1.1e-10 70.5 126 31.0
Phvul.008G062800 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.9e-10 69.7 124 37.1
Lalb_Chr15g0088741 Lupinus albus HOM05D005430 ORTHO05D007814 2.5e-10 69.3 113 30.1
Migut.G00604 Erythranthe guttata HOM05D005430 ORTHO05D007814 3.2e-10 68.9 109 31.2
Rhsim02G0052600 Rhododendron simsii HOM05D016215 ORTHO05D011855 3.2e-10 68.9 137 32.8
CANSAT35G0230 Cannabis sativa HOM05D000256 ORTHO05D000119 2.1e-09 66.2 108 29.6
Sp3g21190 Schrenkiella parvula HOM05D010815 ORTHO05D011855 2.1e-09 66.2 123 32.5
Manes.03G153950 Manihot esculenta HOM05D000256 ORTHO05D000119 2.7e-09 65.9 104 35.6
Phvul.011G169266 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 2.7e-09 65.9 95 35.8
Aqoxy3G03006 Aquilegia oxysepala HOM05D000593 ORTHO05D011855 3.5e-09 65.5 133 30.8
AL300U10020 Arabidopsis lyrata HOM05D010815 ORTHO05D011855 3.5e-09 65.5 126 31.0
AL3G39290 Arabidopsis lyrata HOM05D010815 ORTHO05D011855 3.5e-09 65.5 126 31.0
Phvul.011G171500 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 3.5e-09 65.5 95 36.8
Aqoxy3G02790 Aquilegia oxysepala HOM05D000256 ORTHO05D000119 4.6e-09 65.1 149 29.5
TAR365G0403 Trochodendron aralioides HOM05D000256 ORTHO05D000119 4.6e-09 65.1 127 27.6
TAR365G0555 Trochodendron aralioides HOM05D000256 ORTHO05D000119 4.6e-09 65.1 127 27.6
TAR365G1110 Trochodendron aralioides HOM05D000256 ORTHO05D000119 4.6e-09 65.1 127 27.6
AT3G24068 Arabidopsis thaliana HOM05D010815 ORTHO05D011855 6.1e-09 64.7 133 30.1
SalBow1G5361 Salvia bowleyana HOM05D016215 ORTHO05D021550 6.1e-09 64.7 113 36.3
FvH4_3g25180 Fragaria vesca HOM05D000256 ORTHO05D000119 1.0e-08 63.9 117 35.9
Aa31LG8G10810 Aethionema arabicum HOM05D010815 ORTHO05D011855 1.3e-08 63.5 94 35.1
Dinv38286 Davidia involucrata HOM05D005430 ORTHO05D007814 1.3e-08 63.5 107 36.4
FvH4_2g19740 Fragaria vesca HOM05D000256 ORTHO05D000119 1.8e-08 63.2 135 29.6
Phvul.011G169244 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.8e-08 63.2 84 38.1
Phvul.011G169310 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 2.3e-08 62.8 126 32.5
vmacro22823 Vaccinium macrocarpon HOM05D000256 ORTHO05D000119 3.9e-08 62.0 111 37.8
Gohir.A04G051850 Gossypium hirsutum HOM05D000256 ORTHO05D000119 5.1e-08 61.6 117 35.9
Nn6g34635 Nelumbo nucifera HOM05D000256 ORTHO05D000119 5.1e-08 61.6 114 36.0
MD05G1181800 Malus domestica HOM05D000256 ORTHO05D000119 6.7e-08 61.2 100 36.0
Manes.03G154000 Manihot esculenta HOM05D000256 ORTHO05D000119 6.7e-08 61.2 123 28.5
Gohir.D05G317566 Gossypium hirsutum HOM05D000256 ORTHO05D000119 8.7e-08 60.8 121 34.7
Manes.03G154300 Manihot esculenta HOM05D000256 ORTHO05D000119 8.7e-08 60.8 123 28.5
Phvul.011G168800 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 8.7e-08 60.8 84 36.9
CiPaw.01G205000 Carya illinoinensis HOM05D000256 ORTHO05D000119 1.5e-07 60.1 125 29.6
MELO3C024072.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.5e-07 60.1 107 32.7
MD04G1242200 Malus domestica HOM05D015853 ORTHO05D000119 1.5e-07 60.1 105 30.5
Sed0009184 Sechium edule HOM05D000256 ORTHO05D000119 1.5e-07 60.1 143 28.0
Gohir.A08G046400 Gossypium hirsutum HOM05D000256 ORTHO05D000119 2.5e-07 59.3 125 28.8
Gorai.004G058000 Gossypium raimondii HOM05D000256 ORTHO05D000119 2.5e-07 59.3 122 30.3
PSO782G2289 Papaver somniferum HOM05D000256 ORTHO05D000119 2.5e-07 59.3 96 30.2
MD05G1182000 Malus domestica HOM05D000256 ORTHO05D000119 3.3e-07 58.9 111 33.3
SHI00018 Sapria himalayana HOM05D005430 ORTHO05D007814 3.3e-07 58.9 128 26.6
AT3G24065 Arabidopsis thaliana HOM05D010815 ORTHO05D011855 4.3e-07 58.5 135 28.1
Gohir.A08G193448 Gossypium hirsutum HOM05D000256 ORTHO05D000119 4.3e-07 58.5 107 29.0
DCAR_008853 Daucus carota HOM05D016215 ORTHO05D011855 5.7e-07 58.2 113 35.4
Gohir.A08G193464 Gossypium hirsutum HOM05D000256 ORTHO05D000119 5.7e-07 58.2 107 29.0
MD05G1181700 Malus domestica HOM05D000256 ORTHO05D000119 5.7e-07 58.2 123 29.3
RcHm_v2.0_Chr5g0046141 Rosa chinensis HOM05D000256 ORTHO05D000119 5.7e-07 58.2 107 29.9
CiPaw.01G204900 Carya illinoinensis HOM05D000256 ORTHO05D000119 7.4e-07 57.8 125 28.0
Phvul.011G123100 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.3e-06 57.0 113 32.7
RcHm_v2.0_Chr6g0312461 Rosa chinensis HOM05D000256 ORTHO05D000119 1.3e-06 57.0 110 32.7
Phvul.011G114700 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.6e-06 56.6 117 32.5
Phvul.011G123000 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.6e-06 56.6 120 31.7
RcHm_v2.0_Chr6g0312471 Rosa chinensis HOM05D000256 ORTHO05D000119 1.6e-06 56.6 107 33.6
TAR362G0888 Trochodendron aralioides HOM05D000256 ORTHO05D000119 1.6e-06 56.6 117 31.6
COL.COLO4_34098 Corchorus olitorius HOM05D000048 ORTHO05D000207 2.2e-06 56.2 105 33.3
Eucgr.H01302 Eucalyptus grandis HOM05D000256 ORTHO05D000119 2.2e-06 56.2 114 29.8
Prupe.8G208500 Prunus persica HOM05D000256 ORTHO05D000119 2.2e-06 56.2 136 25.7
PGR142G0414 Punica granatum HOM05D000256 ORTHO05D000119 2.2e-06 56.2 90 34.4
RcHm_v2.0_Chr6g0285441 Rosa chinensis HOM05D000256 ORTHO05D000119 2.8e-06 55.8 126 33.3
Medtr1g058520 Medicago truncatula HOM05D000256 ORTHO05D000119 3.7e-06 55.5 89 32.6
PGR044G1630 Punica granatum HOM05D000256 ORTHO05D000119 3.7e-06 55.5 105 34.3
Oeu045965.1 Olea europaea HOM05D023321 ORTHO05D021550 4.8e-06 55.1 93 35.5
Migut.J01121 Erythranthe guttata HOM05D000256 ORTHO05D000119 6.3e-06 54.7 116 29.3
MD00G1207100 Malus domestica HOM05D015853 ORTHO05D000119 6.3e-06 54.7 109 30.3
MD04G1242900 Malus domestica HOM05D015853 ORTHO05D000119 6.3e-06 54.7 109 30.3
Oeu048230.1 Olea europaea HOM05D023321 ORTHO05D021550 6.3e-06 54.7 124 31.5
Phvul.008G177700 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 6.3e-06 54.7 89 34.8
Thecc.01G232200 Theobroma cacao HOM05D000256 ORTHO05D000119 6.3e-06 54.7 138 25.4
CANSAT78G0119 Cannabis sativa HOM05D000256 ORTHO05D000119 8.2e-06 54.3 100 32.0
Medtr1g057370 Medicago truncatula HOM05D000256 ORTHO05D000119 8.2e-06 54.3 107 30.8
Nitab4.5_0000401g0200 Nicotiana tabacum HOM05D000256 ORTHO05D000119 8.2e-06 54.3 125 31.2


User provided reference genes

Program Settings