Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.2e-145 518.1 276 100.0
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 2.4e-140 502.3 276 97.1
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.1e-140 501.5 276 96.4
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 5.9e-139 497.7 276 96.4
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 1.2e-134 483.4 275 92.7
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 1.7e-122 443.0 275 83.6
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 2.1e-120 436.0 275 82.2
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 9.8e-118 427.2 274 81.4
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 9.2e-116 420.6 276 79.0
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 4.5e-115 418.3 273 80.2
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 6.6e-114 414.5 273 79.1
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 4.0e-111 405.2 274 77.0
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 1.7e-109 399.8 271 76.4
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 2.9e-109 399.1 273 75.8
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 6.4e-109 397.9 266 75.9
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 8.3e-109 397.5 274 76.3
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.6e-107 393.3 275 74.9
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 1.6e-107 393.3 273 74.7
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 2.0e-107 392.9 274 74.5
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 2.0e-107 392.9 275 73.1
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 2.0e-107 392.9 266 75.6
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 7.8e-107 391.0 273 74.0
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 1.3e-106 390.2 273 74.7
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 1.3e-106 390.2 272 73.5
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 2.3e-106 389.4 273 74.7
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 3.0e-106 389.0 274 72.6
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 8.6e-106 387.5 276 72.1
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 4.3e-105 385.2 266 74.4
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 9.5e-105 384.0 273 71.8
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.2e-104 383.6 275 73.1
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 3.6e-104 382.1 274 73.0
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.1e-103 380.6 274 72.6
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 2.3e-103 379.4 275 70.2
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 8.9e-103 377.5 268 72.8
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 2.0e-102 376.3 272 71.7
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 2.6e-102 375.9 274 71.5
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 2.6e-102 375.9 268 71.6
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 2.2e-101 372.9 274 69.7
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 2.2e-101 372.9 275 68.4
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 4.9e-101 371.7 268 71.3
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 1.1e-100 370.5 272 70.2
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 1.4e-100 370.2 268 70.9
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 2.4e-100 369.4 269 72.1
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 3.2e-100 369.0 268 70.5
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 1.2e-99 367.1 265 71.7
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 3.5e-99 365.5 278 70.1
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 3.5e-99 365.5 274 68.2
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 4.6e-99 365.2 270 68.5
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 6.0e-99 364.8 273 70.0
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 7.8e-99 364.4 274 67.5
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 1.0e-98 364.0 272 68.0
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 3.0e-98 362.5 278 69.8
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 3.0e-98 362.5 273 69.2
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 3.0e-98 362.5 275 68.4
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 3.0e-98 362.5 272 67.3
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 3.9e-98 362.1 243 77.4
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 3.9e-98 362.1 269 71.7
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 5.0e-98 361.7 274 67.2
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 5.0e-98 361.7 275 67.3
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 6.6e-98 361.3 273 68.9
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 8.6e-98 360.9 274 70.8
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 1.9e-97 359.8 325 61.2
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 2.5e-97 359.4 277 67.5
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 7.3e-97 357.8 273 68.5
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 7.3e-97 357.8 273 68.5
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 1.2e-96 357.1 278 68.0
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 1.6e-96 356.7 274 67.5
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 2.1e-96 356.3 277 67.5
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 3.6e-96 355.5 268 69.4
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 3.6e-96 355.5 266 67.7
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 4.7e-96 355.1 275 69.1
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 4.0e-95 352.1 241 77.2
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 1.5e-94 350.1 276 67.8
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 3.4e-94 349.0 270 68.5
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 1.7e-93 346.7 274 66.4
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 4.9e-93 345.1 269 68.0
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 8.3e-93 344.4 273 67.4
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 1.1e-92 344.0 234 74.8
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 4.1e-92 342.0 288 63.9
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 5.4e-92 341.7 276 66.3
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 7.1e-92 341.3 265 65.3
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.6e-91 340.1 273 65.6
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 2.1e-91 339.7 282 66.0
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 2.7e-91 339.3 267 66.3
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 6.0e-91 338.2 273 63.0
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 1.1e-89 334.0 282 65.6
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 1.1e-89 334.0 266 65.0
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 1.9e-89 333.2 264 66.3
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 1.2e-88 330.5 266 62.0
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 6.2e-88 328.2 225 76.9
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 6.4e-85 318.2 274 61.3
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 7.1e-84 314.7 259 61.4
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 8.7e-82 307.8 224 69.6
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 3.3e-81 305.8 266 60.5
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 5.6e-81 305.1 272 59.2
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.6e-80 303.5 240 65.8
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 3.6e-80 302.4 266 60.5
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.1e-79 300.8 236 64.8
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 9.9e-78 294.3 240 63.3
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 1.7e-74 283.5 391 43.7
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.6e-72 276.9 268 56.3
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.3e-69 267.3 268 54.1
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 9.3e-68 261.2 269 53.5
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 2.3e-66 256.5 228 61.4
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 7.1e-60 235.0 149 81.2
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 3.2e-52 209.5 184 64.7
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.3e-49 199.1 137 70.1
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 3.7e-48 196.1 183 62.8
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 3.7e-48 196.1 220 51.8
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 3.2e-44 183.0 147 63.3
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 5.1e-42 175.6 140 57.9
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 8.8e-42 174.9 217 46.5
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 4.5e-38 162.5 120 71.7
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 1.6e-35 154.1 133 62.4
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.0e-30 137.1 80 95.0
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 2.2e-29 133.7 209 45.0
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 2.9e-29 133.3 137 58.4
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 5.5e-28 129.0 133 59.4
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 6.1e-27 125.6 119 58.0
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 7.7e-22 108.6 248 33.1
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 4.2e-20 102.8 80 65.0
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 1.6e-11 74.3 108 42.6
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 1.4e-07 61.2 50 54.0


User provided reference genes

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