Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0617 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.5e-55 217.6 105 100.0
FAN01G1087 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.6e-47 191.8 103 89.3
FAN14G5848 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.4e-34 147.1 108 65.7
RcHm_v2.0_Chr1g0344421 Rosa chinensis HOM05D000003 ORTHO05D006737 6.3e-33 144.1 108 63.0
FvH4_3g25361 Fragaria vesca HOM05D000003 ORTHO05D006737 5.9e-31 137.5 108 63.0
FAN12G2468 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.8e-30 134.8 98 67.3
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 1.9e-29 132.5 105 59.0
FvH4_4g10782 Fragaria vesca HOM05D000003 ORTHO05D006737 4.2e-29 131.3 101 60.4
FAN12G3592 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.2e-29 131.3 94 68.1
FAN13G1105 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.2e-29 130.6 108 61.1
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 7.2e-29 130.6 108 56.5
RcHm_v2.0_Chr5g0040041 Rosa chinensis HOM05D000003 ORTHO05D006737 9.4e-29 130.2 108 60.2
FAN18G0619 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.2e-28 129.8 108 61.1
RcHm_v2.0_Chr2g0125521 Rosa chinensis HOM05D000003 ORTHO05D006737 2.7e-28 128.6 109 58.7
FAN20G2266 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.7e-28 127.9 108 56.5
RcHm_v2.0_Chr5g0031961 Rosa chinensis HOM05D000003 ORTHO05D006737 1.8e-27 125.9 108 56.5
FAN09G3586 Fragaria x ananassa HOM05D004387 ORTHO05D005218 5.2e-27 124.4 94 63.8
FvH4_6g06990 Fragaria vesca HOM05D000003 ORTHO05D006737 5.7e-26 120.9 89 66.3
RcHm_v2.0_Chr4g0397511 Rosa chinensis HOM05D000003 ORTHO05D006737 1.4e-24 116.3 108 52.8
FvH4_5g01660 Fragaria vesca HOM05D000003 ORTHO05D006737 7.0e-24 114.0 104 58.7
FvH4_6g32941 Fragaria vesca HOM05D000003 ORTHO05D006737 2.2e-22 109.0 109 52.3
FAN14G2822 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.5e-22 107.5 85 60.0
FvH4_6g08250 Fragaria vesca HOM05D000003 ORTHO05D006737 8.5e-22 107.1 85 60.0
RcHm_v2.0_Chr5g0065261 Rosa chinensis HOM05D000003 ORTHO05D006737 4.2e-21 104.8 107 47.7
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 5.5e-21 104.4 107 47.7
RcHm_v2.0_Chr6g0288751 Rosa chinensis HOM05D000003 ORTHO05D006737 5.5e-21 104.4 107 47.7
FvH4_3g32552 Fragaria vesca HOM05D000003 ORTHO05D006737 9.4e-21 103.6 108 47.2
RcHm_v2.0_Chr7g0212601 Rosa chinensis HOM05D000003 ORTHO05D006737 1.0e-19 100.1 104 47.1
FAN01G2975 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.8e-19 99.4 103 50.5
RcHm_v2.0_Chr2g0118121 Rosa chinensis HOM05D000003 ORTHO05D006737 3.4e-18 95.1 101 43.6
FvH4_3g20371 Fragaria vesca HOM05D000003 ORTHO05D000004 4.4e-18 94.7 102 41.2
FvH4_4g20982 Fragaria vesca HOM05D000003 ORTHO05D006737 7.5e-18 94.0 102 41.2
FAN18G0759 Fragaria x ananassa HOM05D000003 ORTHO05D006737 9.8e-18 93.6 71 63.4
FAN14G3227 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.3e-17 93.2 98 50.0
RcHm_v2.0_Chr1g0314431 Rosa chinensis HOM05D000003 ORTHO05D006737 2.2e-17 92.4 108 42.6
FvH4_6g36441 Fragaria vesca HOM05D000003 ORTHO05D019158 4.8e-17 91.3 104 43.3
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 6.3e-17 90.9 108 42.6
FvH4_6g52701 Fragaria vesca HOM05D000003 ORTHO05D006737 1.1e-16 90.1 96 41.7
FvH4_2g00211 Fragaria vesca HOM05D000003 ORTHO05D006737 1.8e-16 89.4 109 42.2
FvH4_1g25610 Fragaria vesca HOM05D000003 ORTHO05D000004 2.4e-16 89.0 96 41.7
FAN11G0642 Fragaria x ananassa HOM05D000355 ORTHO05D000227 5.4e-16 87.8 73 58.9
FvH4_3g27973 Fragaria vesca HOM05D000003 ORTHO05D006737 7.0e-16 87.4 97 41.2
RcHm_v2.0_Chr7g0176911 Rosa chinensis HOM05D000003 ORTHO05D006737 9.1e-16 87.0 105 40.0
RcHm_v2.0_Chr1g0336051 Rosa chinensis HOM05D000003 ORTHO05D006737 1.2e-15 86.7 108 39.8
RcHm_v2.0_Chr7g0198361 Rosa chinensis HOM05D000003 ORTHO05D006737 2.0e-15 85.9 98 40.8
FAN25G3140 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.5e-15 85.1 96 39.6
FvH4_5g31132 Fragaria vesca HOM05D002804 ORTHO05D006737 5.9e-15 84.3 102 38.2
RcHm_v2.0_Chr4g0395671 Rosa chinensis HOM05D000003 ORTHO05D006737 5.9e-15 84.3 98 41.8
RcHm_v2.0_Chr5g0033371 Rosa chinensis HOM05D000003 ORTHO05D006737 2.2e-14 82.4 105 39.0
FvH4_5g33393 Fragaria vesca HOM05D000003 ORTHO05D006737 3.8e-14 81.6 102 39.2
FvH4_6g21171 Fragaria vesca HOM05D000003 ORTHO05D006737 3.8e-14 81.6 99 35.4
RcHm_v2.0_Chr5g0072311 Rosa chinensis HOM05D000003 ORTHO05D006737 5.0e-14 81.3 94 42.6
FvH4_1g19421 Fragaria vesca HOM05D000003 ORTHO05D006737 6.5e-14 80.9 94 39.4
FAN15G1410 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.5e-14 80.9 89 40.4
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 6.5e-14 80.9 53 71.7
RcHm_v2.0_Chr5g0036711 Rosa chinensis HOM05D000003 ORTHO05D006737 8.5e-14 80.5 85 49.4
FvH4_6g20980 Fragaria vesca HOM05D017784 ORTHO05D006737 2.5e-13 79.0 107 40.2
FAN01G2436 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.5e-13 77.8 101 36.6
FAN15G2825 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.5e-13 77.8 89 40.4
FvH4_4g24131 Fragaria vesca HOM05D000003 ORTHO05D015112 2.1e-12 75.9 100 39.0
RcHm_v2.0_Chr3g0474921 Rosa chinensis HOM05D000003 ORTHO05D006737 6.1e-12 74.3 84 46.4
FAN19G0394 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.0e-12 73.9 89 38.2
FAN19G1043 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.0e-12 73.9 89 38.2
FvH4_5g04911 Fragaria vesca HOM05D000003 ORTHO05D006737 1.4e-11 73.2 68 52.9
FvH4_5g01582 Fragaria vesca HOM05D000003 ORTHO05D006737 2.3e-11 72.4 53 56.6
FAN27G1320 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.0e-11 72.0 86 38.4
FvH4_5g30811 Fragaria vesca HOM05D000003 ORTHO05D006737 6.8e-11 70.9 102 38.2
FAN05G0213 Fragaria x ananassa HOM05D001310 ORTHO05D008060 6.8e-11 70.9 49 63.3
FvH4_2g19503 Fragaria vesca HOM05D000003 ORTHO05D006737 8.8e-11 70.5 84 39.3
RcHm_v2.0_Chr6g0286611 Rosa chinensis HOM05D000003 ORTHO05D006737 8.8e-11 70.5 68 51.5
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 1.5e-10 69.7 54 59.3
FvH4_6g08193 Fragaria vesca HOM05D000003 ORTHO05D006737 2.6e-10 68.9 84 36.9
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.4e-10 68.6 53 58.5
FAN08G0755 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.7e-10 67.8 51 56.9
FvH4_5g12241 Fragaria vesca HOM05D000003 ORTHO05D000004 1.7e-09 66.2 84 39.3
RcHm_v2.0_Chr4g0423161 Rosa chinensis HOM05D000003 ORTHO05D006737 1.7e-09 66.2 81 44.4
FAN13G3306 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.7e-09 65.1 86 33.7
RcHm_v2.0_Chr1g0348191 Rosa chinensis HOM05D000003 ORTHO05D006737 4.9e-09 64.7 69 46.4
FAN04G2364 Fragaria x ananassa HOM05D030836 ORTHO05D035801 1.4e-08 63.2 53 64.2
FvH4_4g01552 Fragaria vesca HOM05D000003 ORTHO05D006737 2.0e-07 59.3 52 48.1
RcHm_v2.0_Chr5g0004021 Rosa chinensis HOM05D000003 ORTHO05D006737 2.7e-07 58.9 73 43.8
FAN09G3474 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.5e-07 58.2 52 48.1
FvH4_6g31921 Fragaria vesca HOM05D000003 ORTHO05D006737 5.9e-07 57.8 68 47.1
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.7e-06 56.2 100 31.0
FAN12G1814 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.3e-06 55.8 47 46.8
FvH4_3g30681 Fragaria vesca HOM05D000003 ORTHO05D000006 2.9e-06 55.5 52 46.2
FvH4_4g16971 Fragaria vesca HOM05D000003 ORTHO05D000004 5.0e-06 54.7 54 42.6
FAN05G1347 Fragaria x ananassa HOM05D015760 ORTHO05D020672 6.6e-06 54.3 52 46.2
FAN19G0368 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.6e-06 53.9 71 42.3


User provided reference genes

Program Settings