Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.2e-264 916.0 461 100.0
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.5e-259 899.0 461 98.0
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 3.7e-255 884.4 446 98.4
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 5.1e-252 874.0 461 94.4
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 1.1e-214 750.0 452 82.5
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 5.5e-214 747.7 377 98.7
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 6.0e-213 744.2 433 83.8
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 1.3e-210 736.5 450 80.4
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 1.1e-209 733.4 450 80.4
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 4.5e-208 728.0 439 81.5
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 7.6e-208 727.2 452 80.3
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 1.0e-207 726.9 452 79.9
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 1.0e-207 726.9 442 80.5
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 2.9e-207 725.3 450 79.3
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 1.1e-206 723.4 443 80.8
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 1.4e-206 723.0 468 77.4
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 4.2e-206 721.5 437 80.8
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 7.2e-206 720.7 451 80.3
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 7.2e-206 720.7 442 79.9
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.2e-205 719.9 452 79.6
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.2e-205 719.9 434 80.6
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 1.6e-205 719.5 436 80.3
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.3e-204 716.5 448 79.5
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 1.8e-204 716.1 451 79.2
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 2.3e-204 715.7 436 80.3
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 3.0e-204 715.3 436 80.3
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.9e-203 712.6 446 79.6
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 4.3e-203 711.4 441 78.0
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 4.3e-203 711.4 442 80.3
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 7.4e-203 710.7 448 78.3
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 9.7e-203 710.3 439 77.9
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 9.7e-203 710.3 448 78.3
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 1.6e-202 709.5 453 77.5
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 2.2e-202 709.1 444 75.7
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.2e-202 709.1 434 80.2
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 2.8e-202 708.8 435 79.1
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 8.2e-202 707.2 433 77.1
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 2.4e-201 705.7 417 83.0
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 3.1e-201 705.3 482 73.0
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 4.1e-201 704.9 435 77.9
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 5.3e-201 704.5 437 78.3
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 6.9e-201 704.1 434 78.3
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 3.4e-200 701.8 433 77.8
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 4.5e-200 701.4 438 79.7
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 1.3e-199 699.9 452 77.2
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 2.9e-199 698.7 458 76.6
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 3.8e-199 698.4 436 76.8
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 3.8e-199 698.4 435 77.2
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 5.0e-199 698.0 442 77.6
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 6.5e-199 697.6 436 77.5
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 1.9e-198 696.0 448 74.6
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 3.2e-198 695.3 436 76.8
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 2.1e-197 692.6 448 75.9
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 2.1e-197 692.6 435 75.6
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 2.7e-197 692.2 436 77.1
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 4.6e-197 691.4 452 75.2
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 7.9e-197 690.6 453 73.5
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 7.9e-197 690.6 436 76.6
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 3.0e-196 688.7 447 72.9
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 3.0e-196 688.7 433 77.1
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 3.3e-195 685.3 448 73.2
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 3.3e-195 685.3 458 76.4
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 2.2e-194 682.6 450 73.6
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 4.8e-194 681.4 448 73.4
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 4.8e-194 681.4 434 75.6
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 6.3e-194 681.0 448 73.2
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 6.3e-194 681.0 435 76.1
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 1.1e-193 680.2 451 77.6
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 1.4e-193 679.9 451 73.4
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 1.4e-193 679.9 430 76.0
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 3.1e-193 678.7 435 76.3
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 5.3e-193 677.9 446 74.2
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 9.1e-193 677.2 449 76.4
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 1.2e-192 676.8 448 73.0
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 1.2e-192 676.8 435 73.8
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 4.5e-192 674.9 454 73.1
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 5.9e-192 674.5 467 70.4
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 1.0e-191 673.7 430 74.9
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 6.5e-191 671.0 448 73.0
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 1.1e-190 670.2 448 73.9
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 1.1e-190 670.2 448 72.8
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 2.5e-190 669.1 468 70.1
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 2.7e-189 665.6 459 71.0
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 4.7e-189 664.8 477 68.8
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 4.7e-189 664.8 448 73.0
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 4.7e-189 664.8 436 72.0
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 1.0e-183 647.1 452 69.9
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 3.2e-182 642.1 464 72.2
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 4.2e-182 641.7 455 71.9
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 5.5e-182 641.3 404 76.2
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 4.7e-181 638.3 456 71.1
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 4.0e-180 635.2 428 72.0
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 5.2e-180 634.8 431 68.2
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 5.2e-180 634.8 508 66.7
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 1.8e-177 626.3 466 67.0
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 7.0e-177 624.4 398 77.6
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 5.0e-175 618.2 412 72.6
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 5.2e-172 608.2 409 74.1
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 5.7e-171 604.7 394 72.6
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 4.1e-169 598.6 457 65.4
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 4.7e-165 585.1 446 67.5
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 2.8e-162 575.9 465 64.5
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 3.5e-160 568.9 448 64.7
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 8.0e-157 557.8 422 62.8
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 2.2e-154 549.7 442 60.0
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 1.1e-150 537.3 438 58.0
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 6.2e-149 531.6 426 60.3
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 2.2e-146 523.1 441 56.7
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 6.4e-146 521.5 322 79.2
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 2.6e-131 473.0 277 80.9
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 7.6e-131 471.5 454 57.5
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 7.6e-115 418.3 431 47.1
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 1.3e-111 407.5 430 54.7
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 1.8e-103 380.6 443 46.3
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 3.9e-103 379.4 315 64.1
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 1.3e-98 364.4 370 54.9
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.4e-89 334.3 182 87.4
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 2.0e-83 313.9 486 37.0
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 9.7e-70 268.5 379 48.5
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 2.3e-63 247.3 339 44.2
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 3.5e-59 233.4 167 70.7
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 2.3e-55 220.7 108 93.5
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 2.4e-44 184.1 117 77.8
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 1.6e-43 181.4 137 71.5
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 3.0e-39 167.2 390 33.3
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 3.7e-37 160.2 124 71.8
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 2.0e-30 137.9 85 74.1
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 2.9e-29 134.0 85 68.2
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 9.5e-25 119.0 67 89.6
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 2.8e-24 117.5 127 47.2
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 2.8e-24 117.5 83 69.9
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 8.3e-21 105.9 67 70.1
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 1.1e-20 105.5 191 31.4
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 1.9e-20 104.8 77 62.3
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 2.4e-20 104.4 104 53.8
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 8.6e-18 95.9 101 53.5
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 2.0e-14 84.7 57 75.4
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 6.4e-13 79.7 70 58.6
arahy.Tifrunner.gnm1.ann1.V8UVVM Arachis hypogaea HOM05D005577 ORTHO05D086716 1.2e-06 58.9 43 60.5


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