Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0497 Fragaria x ananassa HOM05D000933 ORTHO05D202359 5.7e-42 173.7 80 100.0
FvH4_4g25220 Fragaria vesca HOM05D000933 ORTHO05D000820 1.7e-14 82.4 36 100.0
FAN12G0596 Fragaria x ananassa HOM05D000933 ORTHO05D000820 1.7e-14 82.4 36 100.0
FAN17G1979 Fragaria x ananassa HOM05D000933 ORTHO05D000820 1.7e-14 82.4 36 100.0
FAN22G0868 Fragaria x ananassa HOM05D000933 ORTHO05D000820 6.5e-14 80.5 36 97.2
TPR.G5657 Trifolium pratense HOM05D000933 ORTHO05D000820 2.4e-08 62.0 39 71.8
RcHm_v2.0_Chr4g0432411 Rosa chinensis HOM05D000933 ORTHO05D000820 4.1e-08 61.2 35 80.0
Ca_25127_v3 Cicer arietinum L. HOM05D000933 ORTHO05D000820 5.3e-08 60.8 39 71.8
VMungo1383G3215 Vigna mungo HOM05D000933 ORTHO05D000820 1.2e-07 59.7 36 75.0
Glyma.11G244600 Glycine max HOM05D000933 ORTHO05D000820 1.6e-07 59.3 39 69.2
Cfa009261 Carpinus fangiana HOM05D000933 ORTHO05D000820 2.0e-07 58.9 36 75.0
Lj6g0021419 Lotus japonicus HOM05D000933 ORTHO05D000820 2.0e-07 58.9 39 69.2
MD16G1106000 Malus domestica HOM05D000933 ORTHO05D000820 2.0e-07 58.9 36 75.0
Phvul.001G256600 Phaseolus vulgaris HOM05D000933 ORTHO05D000820 2.0e-07 58.9 39 66.7
Glyma.18G012500 Glycine max HOM05D000933 ORTHO05D000820 3.5e-07 58.2 39 66.7
Medtr3g086340 Medicago truncatula HOM05D000933 ORTHO05D000820 4.5e-07 57.8 39 69.2
COL.COLO4_03316 Corchorus olitorius HOM05D000933 ORTHO05D000820 5.9e-07 57.4 36 72.2
CANSAT01G2129 Cannabis sativa HOM05D000933 ORTHO05D000820 7.7e-07 57.0 35 71.4
Haze_12294 Corylus avellana HOM05D000933 ORTHO05D000820 7.7e-07 57.0 36 75.0
Duzib248G0384 Durio zibethinus HOM05D000933 ORTHO05D000820 7.7e-07 57.0 25 92.0
Psat5g092680 Pisum sativum HOM05D000933 ORTHO05D000820 1.0e-06 56.6 39 66.7
Prupe.1G240400 Prunus persica HOM05D000933 ORTHO05D000820 1.7e-06 55.8 35 71.4
Potri.010G051400 Populus trichocarpa HOM05D000933 ORTHO05D000820 2.9e-06 55.1 25 84.0
Thecc.02G267100 Theobroma cacao HOM05D000933 ORTHO05D000820 2.9e-06 55.1 36 72.2
MSTRG.7956 Avicennia marina HOM05D000933 ORTHO05D000820 3.8e-06 54.7 25 84.0
PGR102G1067 Punica granatum HOM05D000933 ORTHO05D000820 3.8e-06 54.7 35 71.4
Atru.chr11.2188 Acer truncatum HOM05D000933 ORTHO05D000820 5.0e-06 54.3 24 91.7
Sabra10G0018700 Salix brachista HOM05D000933 ORTHO05D000820 5.0e-06 54.3 36 66.7
arahy.Tifrunner.gnm1.ann1.69ELPC Arachis hypogaea HOM05D000933 ORTHO05D000820 6.5e-06 53.9 25 84.0
arahy.Tifrunner.gnm1.ann1.M8ATBD Arachis hypogaea HOM05D000933 ORTHO05D000820 6.5e-06 53.9 25 84.0
Hma1.2p1_0079F.1_g041270 Hydrangea macrophylla HOM05D000933 ORTHO05D000820 8.5e-06 53.5 25 80.0
QL03p056124 Quercus lobata HOM05D000933 ORTHO05D000820 8.5e-06 53.5 35 71.4


User provided reference genes

Program Settings