Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 0.0e+00 1201.4 681 100.0
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 0.0e+00 1078.9 783 82.2
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.1e-292 1009.6 778 78.9
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.0e-289 998.8 832 74.8
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 1.4e-282 976.1 774 76.9
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 9.2e-226 787.3 784 64.0
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 1.8e-221 773.1 638 76.5
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 4.9e-219 765.0 784 62.8
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 5.9e-164 582.0 735 54.4
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 3.8e-163 579.3 884 48.8
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 1.7e-158 563.9 761 52.4
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 1.4e-157 560.8 703 54.9
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 1.8e-157 560.5 777 52.1
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 5.3e-157 558.9 701 53.5
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 5.9e-156 555.4 700 54.0
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 1.0e-155 554.7 700 54.0
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 1.7e-155 553.9 764 51.4
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 9.1e-149 531.6 862 41.0
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 2.2e-147 526.9 798 50.0
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 2.9e-147 526.6 713 52.7
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 1.1e-146 524.6 698 53.6
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 4.4e-143 512.7 779 48.5
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 8.2e-142 508.4 659 45.8
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 1.1e-141 508.1 794 49.5
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.8e-141 507.3 674 46.1
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 3.5e-140 503.1 674 44.7
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 5.9e-140 502.3 672 44.9
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 7.7e-140 501.9 743 47.2
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 1.3e-139 501.1 670 45.5
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 1.3e-139 501.1 670 45.5
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 2.2e-139 500.4 679 53.8
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 2.3e-136 490.3 681 44.6
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 6.3e-134 482.3 758 48.7
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 1.8e-133 480.7 782 48.6
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 2.9e-131 473.4 787 47.8
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 3.6e-129 466.5 677 44.0
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 2.3e-128 463.8 778 45.0
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 2.6e-127 460.3 673 43.1
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 2.8e-126 456.8 830 43.5
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 1.8e-125 454.1 663 43.0
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 1.2e-124 451.4 754 45.5
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 7.3e-122 442.2 759 44.5
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 4.7e-121 439.5 774 45.9
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 6.1e-121 439.1 633 51.0
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 3.0e-120 436.8 773 43.6
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 6.8e-120 435.6 677 40.3
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 8.9e-120 435.3 631 52.1
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 6.6e-115 419.1 858 42.7
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 3.3e-114 416.8 766 45.4
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 7.3e-114 415.6 681 39.1
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 4.7e-113 412.9 768 43.4
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 6.2e-113 412.5 776 43.6
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 2.0e-111 407.5 769 43.6
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 1.3e-110 404.8 777 44.4
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 2.2e-110 404.1 765 44.7
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 2.9e-110 403.7 657 49.0
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 2.9e-110 403.7 632 41.5
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 4.1e-109 399.8 771 44.5
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 5.4e-109 399.4 689 47.2
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 2.7e-108 397.1 769 42.7
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 2.7e-108 397.1 697 45.6
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 6.0e-108 396.0 690 47.1
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 2.1e-105 387.5 694 45.8
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 2.8e-105 387.1 715 45.9
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 3.6e-105 386.7 782 42.2
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 8.1e-105 385.6 764 42.4
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 1.1e-104 385.2 740 43.4
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 7.5e-103 379.0 640 38.6
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 4.1e-101 373.2 763 43.5
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 1.6e-100 371.3 690 46.2
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 4.6e-100 369.8 659 44.2
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 3.9e-99 366.7 638 38.2
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 2.1e-97 360.9 516 41.9
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 4.0e-96 356.7 617 47.2
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 3.4e-95 353.6 756 40.3
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 6.4e-94 349.4 480 42.5
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 1.4e-93 348.2 621 36.4
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 2.4e-93 347.4 663 42.7
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 1.6e-92 344.7 449 45.2
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 1.6e-89 334.7 546 50.2
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 1.7e-86 324.7 460 42.8
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 8.1e-81 305.8 585 34.2
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 4.9e-78 296.6 556 46.4
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 2.8e-73 280.8 629 40.4
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 2.9e-70 270.8 675 35.9
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 2.4e-69 267.7 618 39.2
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 4.6e-68 263.5 582 32.8
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 1.1e-66 258.8 533 44.1
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.5e-66 258.5 579 41.1
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 3.3e-66 257.3 235 54.0
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 3.4e-55 220.7 266 48.5
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 2.2e-54 218.0 330 55.5
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 1.1e-50 205.7 414 36.2
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 4.2e-45 187.2 175 57.1
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 3.6e-44 184.1 428 33.6
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 1.4e-37 162.2 462 42.6
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 2.6e-34 151.4 301 54.5
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 8.2e-33 146.4 633 26.1
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 1.3e-30 139.0 347 32.0
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 2.1e-28 131.7 196 43.9
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 5.0e-22 110.5 179 39.1
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.8e-19 102.1 146 47.3
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 6.8e-19 100.1 75 66.7
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 2.6e-18 98.2 217 35.0
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 9.8e-18 96.3 160 38.1
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 1.4e-16 92.4 95 49.5
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 5.9e-15 87.0 155 36.1
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.0e-14 86.3 46 84.8
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 8.6e-14 83.2 81 54.3
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 1.1e-13 82.8 135 44.4
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 3.6e-12 77.8 125 41.6
vmacro10766 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 6.1e-12 77.0 128 36.7
Haze_10728 Corylus avellana HOM05D063416 ORTHO05D034208 3.7e-09 67.8 104 38.5
C02p32190 Brassica napus HOM05D006757 ORTHO05D004651 1.8e-08 65.5 46 60.9
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 2.7e-07 61.6 153 27.5


User provided reference genes

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