Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 9.8e-101 370.2 190 100.0
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.4e-99 364.4 190 98.9
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.7e-97 359.4 190 97.9
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 3.5e-90 335.1 190 90.5
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 1.6e-82 309.7 159 98.1
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 9.2e-67 257.3 192 74.0
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 1.6e-55 219.9 193 64.8
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 2.4e-51 206.1 190 59.5
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 4.2e-51 205.3 196 59.7
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 6.0e-50 201.4 188 59.6
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 1.3e-49 200.3 190 57.9
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 3.0e-49 199.1 187 59.9
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 5.1e-49 198.4 178 60.7
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 6.6e-49 198.0 167 62.3
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.1e-48 197.2 166 63.3
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 1.5e-48 196.8 129 72.1
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 1.5e-48 196.8 204 55.4
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 4.3e-48 195.3 180 58.3
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 4.3e-48 195.3 128 71.1
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 7.3e-48 194.5 197 56.9
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 7.3e-48 194.5 188 58.0
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 7.3e-48 194.5 190 57.9
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 9.6e-48 194.1 193 57.0
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 9.6e-48 194.1 189 54.5
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 9.6e-48 194.1 188 58.0
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 2.8e-47 192.6 190 54.7
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 1.1e-46 190.7 187 55.1
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 1.4e-46 190.3 136 68.4
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 1.8e-46 189.9 188 55.9
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 3.1e-46 189.1 138 68.8
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 5.3e-46 188.3 191 56.0
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 6.9e-46 188.0 145 64.1
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 9.0e-46 187.6 141 64.5
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 1.2e-45 187.2 191 53.9
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 1.2e-45 187.2 192 54.2
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 1.5e-45 186.8 209 55.0
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 1.5e-45 186.8 124 70.2
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.5e-45 186.8 190 54.7
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 1.5e-45 186.8 190 55.8
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 2.0e-45 186.4 164 59.8
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 2.0e-45 186.4 164 59.8
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 2.0e-45 186.4 137 65.7
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 2.6e-45 186.0 190 54.7
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 3.4e-45 185.7 173 57.2
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 4.5e-45 185.3 157 62.4
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 5.8e-45 184.9 180 56.7
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 5.8e-45 184.9 181 55.2
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 7.6e-45 184.5 126 71.4
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 7.6e-45 184.5 125 71.2
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 1.3e-44 183.7 157 62.4
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 1.3e-44 183.7 164 59.1
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 2.9e-44 182.6 148 62.8
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 2.9e-44 182.6 125 68.8
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 3.8e-44 182.2 126 69.0
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 4.9e-44 181.8 191 53.9
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 6.4e-44 181.4 135 66.7
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 8.4e-44 181.0 148 61.5
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 8.4e-44 181.0 123 68.3
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 1.1e-43 180.6 193 53.9
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 1.1e-43 180.6 124 66.1
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 1.1e-43 180.6 145 63.4
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 1.1e-43 180.6 156 62.2
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 1.4e-43 180.3 125 70.4
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 1.4e-43 180.3 183 51.9
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 1.4e-43 180.3 187 55.1
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 1.9e-43 179.9 145 62.8
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 2.4e-43 179.5 125 70.4
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 7.1e-43 177.9 128 68.8
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 9.3e-43 177.6 191 51.3
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 9.3e-43 177.6 145 63.4
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 1.6e-42 176.8 148 61.5
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 1.6e-42 176.8 136 64.0
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 1.6e-42 176.8 189 53.4
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 2.7e-42 176.0 151 60.3
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 3.5e-42 175.6 173 54.3
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 6.0e-42 174.9 125 65.6
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 1.8e-41 173.3 129 65.1
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 2.3e-41 172.9 120 69.2
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 2.3e-41 172.9 137 62.0
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 3.0e-41 172.6 137 61.3
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 5.1e-41 171.8 125 65.6
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 5.1e-41 171.8 125 65.6
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 5.1e-41 171.8 125 65.6
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 5.1e-41 171.8 125 65.6
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 5.1e-41 171.8 125 65.6
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 6.7e-41 171.4 151 58.3
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 1.1e-40 170.6 174 53.4
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 1.1e-40 170.6 169 56.2
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 1.9e-40 169.9 189 50.3
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 3.3e-40 169.1 108 71.3
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 7.4e-40 167.9 187 51.9
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 6.2e-39 164.9 188 53.2
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 1.8e-38 163.3 154 51.9
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 3.1e-38 162.5 121 65.3
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 5.3e-38 161.8 124 64.5
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 2.6e-37 159.5 122 62.3
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 1.4e-35 153.7 103 66.0
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 2.5e-35 152.9 118 63.6
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 1.2e-34 150.6 150 54.7
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 6.9e-30 134.8 143 53.8
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 6.9e-30 134.8 143 53.8
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 6.9e-30 134.8 143 53.8
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 6.9e-30 134.8 99 65.7
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 3.5e-26 122.5 116 51.7
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 3.7e-23 112.5 80 67.5
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 1.1e-22 110.9 127 45.7
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 4.5e-21 105.5 110 58.2
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 5.9e-21 105.1 100 61.0
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 7.7e-21 104.8 123 47.2
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.7e-20 103.6 52 92.3
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 1.0e-17 94.4 104 45.2
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 1.1e-16 90.9 156 37.8
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.5e-16 90.5 70 65.7
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 7.4e-08 61.6 147 32.7
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 1.1e-06 57.8 44 54.5


User provided reference genes

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