Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.7e-129 466.1 241 100.0
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.6e-119 433.0 255 90.6
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 2.0e-119 432.6 255 90.6
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 7.7e-119 430.6 255 90.2
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 4.7e-100 368.2 249 79.5
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 2.9e-65 252.7 249 60.2
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 1.9e-64 250.0 244 62.7
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 1.6e-63 246.9 233 60.9
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 2.7e-63 246.1 238 58.8
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 4.6e-63 245.4 240 59.6
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 4.6e-63 245.4 247 59.1
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 2.8e-60 236.1 222 59.9
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 4.0e-59 232.3 233 57.5
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 2.6e-58 229.6 232 56.9
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 3.4e-58 229.2 239 56.5
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 7.1e-56 221.5 241 55.2
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 1.6e-55 220.3 234 56.0
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 2.7e-55 219.5 220 55.9
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 7.9e-55 218.0 221 56.1
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 1.0e-54 217.6 233 53.6
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 3.0e-54 216.1 228 56.1
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 2.5e-53 213.0 224 55.8
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 4.8e-52 208.8 233 51.5
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 6.2e-52 208.4 233 52.4
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 8.1e-52 208.0 240 52.1
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 1.1e-51 207.6 217 55.3
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 1.1e-51 207.6 235 52.8
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 1.5e-50 203.8 239 52.7
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 2.6e-50 203.0 217 54.8
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 1.1e-48 197.6 217 51.2
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 1.4e-48 197.2 233 48.5
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 6.0e-47 191.8 219 51.6
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 1.0e-46 191.0 219 50.2
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 1.8e-46 190.3 255 47.8
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 1.8e-46 190.3 234 50.4
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 3.7e-44 182.6 232 46.1
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 8.2e-44 181.4 190 54.2
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 1.4e-43 180.6 188 54.8
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 1.2e-42 177.6 221 46.6
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 1.2e-42 177.6 221 46.6
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 2.6e-42 176.4 222 46.4
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 3.4e-42 176.0 190 53.7
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 5.9e-42 175.3 223 48.4
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 5.9e-42 175.3 228 49.6
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 7.6e-42 174.9 221 45.7
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 1.0e-41 174.5 221 45.7
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 1.4e-40 170.6 222 44.1
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.9e-40 170.2 219 45.7
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 1.9e-40 170.2 219 45.7
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 2.5e-40 169.9 221 46.2
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 9.3e-40 167.9 219 46.1
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 2.1e-39 166.8 245 43.7
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 3.6e-39 166.0 217 44.2
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 7.9e-39 164.9 220 45.0
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 9.7e-37 157.9 153 58.2
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 2.2e-36 156.8 233 41.2
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 2.1e-31 140.2 167 50.3
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 5.7e-29 132.1 176 44.3
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 3.7e-28 129.4 176 43.2
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 8.2e-28 128.3 168 49.4
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 9.4e-24 114.8 199 35.7
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.6e-23 114.0 133 50.4
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 6.1e-23 112.1 152 46.1
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 8.8e-22 108.2 129 53.5
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 5.3e-19 99.0 229 31.9
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 8.5e-17 91.7 106 50.0
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.7e-15 86.7 233 30.5
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 1.8e-14 84.0 114 41.2
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 2.0e-13 80.5 71 62.0
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 2.0e-13 80.5 64 71.9
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 1.3e-09 67.8 189 28.0
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 3.8e-09 66.2 157 31.8
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.1e-08 64.7 204 27.0
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.1e-08 64.7 204 27.0
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 2.5e-08 63.5 49 69.4
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 9.4e-08 61.6 181 26.0


User provided reference genes

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