Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 3.4e-171 605.1 359 100.0
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 1.1e-158 563.5 359 94.7
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 4.6e-152 541.6 359 91.6
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 2.7e-136 489.2 359 81.3
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 2.3e-90 336.7 383 61.6
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 6.6e-82 308.5 382 53.1
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 4.7e-80 302.4 382 56.5
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 1.2e-59 234.6 391 42.5
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 1.6e-59 234.2 399 43.4
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 8.1e-56 221.9 395 44.8
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 7.1e-52 208.8 383 46.0
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 6.0e-51 205.7 378 44.2
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 2.3e-50 203.8 397 46.3
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.3e-48 198.0 382 45.0
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 2.1e-48 197.2 380 43.4
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 3.7e-48 196.4 396 41.7
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.2e-46 191.4 393 40.5
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 5.8e-46 189.1 323 40.2
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.0e-45 188.3 360 39.4
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 3.2e-44 183.3 365 47.4
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 9.3e-44 181.8 386 38.9
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 6.0e-43 179.1 352 37.8
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 1.0e-42 178.3 380 44.7
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 5.1e-42 176.0 372 44.9
FAN07G1029 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.5e-41 174.5 136 74.3
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.5e-41 174.5 388 44.6
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 1.9e-41 174.1 364 44.0
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 3.3e-41 173.3 360 47.2
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 4.3e-41 172.9 374 47.6
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 7.4e-41 172.2 367 42.8
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 1.6e-40 171.0 374 42.2
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 1.6e-40 171.0 374 42.2
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 2.8e-40 170.2 417 41.7
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 4.8e-40 169.5 359 45.4
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 6.2e-40 169.1 374 42.2
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 1.4e-39 167.9 389 36.8
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 3.1e-39 166.8 367 46.6
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 4.0e-39 166.4 299 38.1
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 6.9e-39 165.6 376 42.0
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 9.0e-39 165.2 388 43.6
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 7.6e-38 162.2 417 36.5
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 1.3e-37 161.4 387 42.1
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 1.7e-37 161.0 370 45.9
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 1.7e-37 161.0 386 37.8
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 2.2e-37 160.6 366 46.2
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 2.2e-37 160.6 388 38.9
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 2.9e-37 160.2 404 31.9
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 3.8e-37 159.8 371 42.9
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 6.5e-37 159.1 364 44.5
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 2.5e-36 157.1 385 40.8
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 2.5e-36 157.1 386 38.1
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 3.2e-36 156.8 360 38.9
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 4.2e-36 156.4 368 40.2
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 4.2e-36 156.4 374 42.0
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 1.6e-35 154.5 272 40.1
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 1.6e-35 154.5 363 40.2
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 2.7e-35 153.7 365 44.7
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 4.6e-35 152.9 371 41.5
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 7.9e-35 152.1 365 32.9
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 1.0e-34 151.8 375 41.9
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 1.8e-34 151.0 368 44.6
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 2.3e-34 150.6 368 45.9
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 3.0e-34 150.2 197 47.7
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 5.1e-34 149.4 423 34.0
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 6.7e-34 149.1 383 34.2
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 5.7e-33 146.0 384 38.8
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.3e-32 144.8 357 37.8
FAN12G0946 Fragaria x ananassa HOM05D005773 ORTHO05D046089 1.6e-32 144.4 136 63.2
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 4.8e-32 142.9 349 39.5
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 8.2e-32 142.1 359 40.7
FvH4_4g21660 Fragaria vesca HOM05D005773 ORTHO05D046089 1.4e-31 141.4 136 62.5
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.8e-31 141.0 361 42.9
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 2.4e-31 140.6 360 45.3
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 3.1e-31 140.2 401 30.4
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 6.9e-31 139.0 420 37.4
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 9.0e-31 138.7 427 34.9
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 1.5e-30 137.9 388 34.3
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 5.9e-30 136.0 359 43.7
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 7.7e-30 135.6 382 33.8
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 7.7e-30 135.6 380 36.3
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 1.3e-29 134.8 356 41.3
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.7e-29 134.4 345 38.3
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 2.9e-29 133.7 421 36.8
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 3.8e-29 133.3 369 42.8
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 8.5e-29 132.1 333 42.9
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 8.5e-29 132.1 421 36.3
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.1e-28 131.7 272 50.0
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 1.1e-28 131.7 343 41.7
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.4e-28 131.3 341 40.2
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 1.9e-28 131.0 333 36.3
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 4.2e-28 129.8 359 39.6
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 1.2e-27 128.3 363 35.0
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 1.2e-27 128.3 365 41.6
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 1.4e-26 124.8 363 41.0
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 1.8e-26 124.4 362 41.2
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 1.8e-26 124.4 354 32.2
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 6.7e-26 122.5 375 41.6
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 8.8e-26 122.1 321 33.0
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 1.7e-24 117.9 249 50.6
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 2.8e-24 117.1 348 40.2
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 3.7e-24 116.7 330 33.9
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 4.8e-24 116.3 297 33.3
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 6.3e-24 115.9 359 42.9
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 6.3e-24 115.9 225 37.3
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 8.2e-24 115.5 330 33.9
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 2.4e-23 114.0 358 37.4
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 2.4e-23 114.0 370 31.6
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 7.7e-22 109.0 181 40.3
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.7e-21 107.8 327 31.8
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 5.0e-21 106.3 172 39.0
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 1.2e-19 101.7 105 52.4
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 2.7e-19 100.5 389 30.3
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 2.8e-16 90.5 335 40.3
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 3.1e-15 87.0 207 32.9
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 3.1e-15 87.0 171 35.1
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 1.5e-14 84.7 372 33.6
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 1.5e-12 78.2 335 38.5
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 1.9e-12 77.8 83 51.8
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 5.5e-12 76.3 335 38.2
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 8.0e-11 72.4 48 66.7
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 2.3e-10 70.9 397 27.0
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 4.1e-07 60.1 44 59.1
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 2.0e-06 57.8 104 37.5
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 5.9e-06 56.2 111 38.7
TAR624G0439 Trochodendron aralioides HOM05D005773 ORTHO05D006930 5.9e-06 56.2 72 44.4


User provided reference genes

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