Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0152 Fragaria x ananassa HOM05D008445 ORTHO05D011083 2.9e-210 734.9 362 100.0
FvH4_4g07610 Fragaria vesca HOM05D008445 ORTHO05D011083 5.7e-174 614.4 309 97.7
FAN11G1101 Fragaria x ananassa HOM05D008445 ORTHO05D010376 6.7e-167 590.9 294 98.6
FAN23G1770 Fragaria x ananassa HOM05D008445 ORTHO05D011083 5.5e-153 544.7 310 89.4
FAN02G4306 Fragaria x ananassa HOM05D008445 ORTHO05D011083 4.5e-147 525.0 267 97.4
FAN01G0838 Fragaria x ananassa HOM05D008445 ORTHO05D011083 2.2e-146 522.7 295 88.8
FAN03G2046 Fragaria x ananassa HOM05D008445 ORTHO05D011083 1.4e-143 513.5 266 95.5
FAN14G1338 Fragaria x ananassa HOM05D008445 ORTHO05D011083 9.5e-137 490.7 317 81.4
FAN11G3515 Fragaria x ananassa HOM05D008445 ORTHO05D011083 4.7e-112 408.7 235 87.2
FAN14G5656 Fragaria x ananassa HOM05D008445 ORTHO05D011083 6.2e-104 381.7 268 74.3
FAN17G1315 Fragaria x ananassa HOM05D008445 ORTHO05D011083 8.4e-77 291.6 147 98.6
FAN21G0968 Fragaria x ananassa HOM05D008445 ORTHO05D011083 1.3e-72 277.7 159 88.7
FAN04G0878 Fragaria x ananassa HOM05D008445 ORTHO05D011083 1.6e-72 277.3 142 96.5
FAN26G2014 Fragaria x ananassa HOM05D001160 ORTHO05D001092 8.2e-72 275.0 205 73.2
FAN13G2769 Fragaria x ananassa HOM05D008445 ORTHO05D011083 3.1e-71 273.1 141 97.2
FAN03G0144 Fragaria x ananassa HOM05D008445 ORTHO05D011083 3.2e-60 236.5 115 99.1
FAN04G1815 Fragaria x ananassa HOM05D008445 ORTHO05D011083 4.2e-60 236.1 115 98.3
FAN12G2459 Fragaria x ananassa HOM05D008445 ORTHO05D011083 3.9e-58 229.6 116 98.3
FAN05G1493 Fragaria x ananassa HOM05D008445 ORTHO05D011083 1.5e-57 227.6 116 97.4
FAN09G3020 Fragaria x ananassa HOM05D008445 ORTHO05D011083 4.3e-57 226.1 115 95.7
FAN21G1290 Fragaria x ananassa HOM05D008445 ORTHO05D011083 6.3e-56 222.2 116 95.7
FAN12G3425 Fragaria x ananassa HOM05D008445 ORTHO05D011083 2.6e-41 173.7 126 72.2
FAN18G1114 Fragaria x ananassa HOM05D008445 ORTHO05D020651 1.1e-39 168.3 212 47.6
FAN11G1778 Fragaria x ananassa HOM05D008445 ORTHO05D011083 1.2e-38 164.9 273 43.2
FAN09G0229 Fragaria x ananassa HOM05D008445 ORTHO05D011083 1.5e-36 157.9 230 45.2
FAN21G2160 Fragaria x ananassa HOM05D008445 ORTHO05D035524 4.0e-34 149.8 120 63.3
FAN15G3679 Fragaria x ananassa HOM05D008445 ORTHO05D011083 3.7e-32 143.3 225 43.6
FvH4_1g19660 Fragaria vesca HOM05D008445 ORTHO05D035524 2.9e-29 133.7 85 74.1
FAN15G2284 Fragaria x ananassa HOM05D008445 ORTHO05D011083 1.4e-26 124.8 235 40.4
FAN23G1608 Fragaria x ananassa HOM05D008445 ORTHO05D020651 1.8e-26 124.4 228 39.5
FvH4_5g02251 Fragaria vesca HOM05D000005 ORTHO05D000294 2.6e-25 120.6 121 54.5
FAN11G2290 Fragaria x ananassa HOM05D008445 ORTHO05D011083 4.4e-25 119.8 213 44.6
FAN05G0706 Fragaria x ananassa HOM05D008445 ORTHO05D011083 4.8e-24 116.3 57 98.2
FAN05G0707 Fragaria x ananassa HOM05D023925 ORTHO05D025416 1.1e-23 115.2 298 36.2
FAN05G4394 Fragaria x ananassa HOM05D008445 ORTHO05D020651 4.5e-22 109.8 240 35.8
FAN21G2682 Fragaria x ananassa HOM05D008445 ORTHO05D020651 1.3e-21 108.2 84 65.5
FAN18G2992 Fragaria x ananassa HOM05D008445 ORTHO05D011083 3.3e-20 103.6 261 35.6
FAN20G0904 Fragaria x ananassa HOM05D008445 ORTHO05D011083 4.2e-20 103.2 153 46.4
RcHm_v2.0_Chr1g0351211 Rosa chinensis HOM05D007741 ORTHO05D015647 2.8e-19 100.5 165 42.4
FAN12G0192 Fragaria x ananassa HOM05D007761 ORTHO05D011461 2.3e-18 97.4 117 49.6
FAN01G0683 Fragaria x ananassa HOM05D007761 ORTHO05D011461 3.0e-18 97.1 117 49.6
FAN10G3275 Fragaria x ananassa HOM05D007761 ORTHO05D011461 3.0e-18 97.1 117 49.6
FAN25G1610 Fragaria x ananassa HOM05D007761 ORTHO05D011461 3.0e-18 97.1 117 49.6
FAN12G1158 Fragaria x ananassa HOM05D008445 ORTHO05D011083 8.9e-18 95.5 94 56.4
RcHm_v2.0_Chr4g0427731 Rosa chinensis HOM05D007741 ORTHO05D006912 1.5e-17 94.7 190 37.9
FAN16G1203 Fragaria x ananassa HOM05D008445 ORTHO05D011083 1.3e-16 91.7 117 53.8
FAN04G2389 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.7e-16 91.3 179 36.9
FAN27G1171 Fragaria x ananassa HOM05D007761 ORTHO05D011083 4.1e-15 86.7 119 47.1
FAN14G1493 Fragaria x ananassa HOM05D001253 ORTHO05D001086 7.0e-15 85.9 100 49.0
FAN05G5109 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.6e-14 84.7 172 39.0
FAN09G0722 Fragaria x ananassa HOM05D007761 ORTHO05D011461 2.0e-14 84.3 108 50.0
FAN05G2318 Fragaria x ananassa HOM05D008445 ORTHO05D022710 3.5e-14 83.6 61 67.2
FAN07G1261 Fragaria x ananassa HOM05D007761 ORTHO05D011461 3.5e-14 83.6 99 49.5
FAN24G1922 Fragaria x ananassa HOM05D008445 ORTHO05D035524 4.5e-14 83.2 62 64.5
FAN15G1618 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.7e-13 81.3 99 48.5
FAN05G3139 Fragaria x ananassa HOM05D008445 ORTHO05D020651 3.8e-13 80.1 62 59.7
FAN16G3080 Fragaria x ananassa HOM05D007761 ORTHO05D000537 3.8e-13 80.1 92 51.1
FAN19G2064 Fragaria x ananassa HOM05D008445 ORTHO05D011083 1.1e-12 78.6 66 59.1
RcHm_v2.0_Chr1g0367541 Rosa chinensis HOM05D007741 ORTHO05D011083 1.1e-12 78.6 229 33.2
FAN06G2527 Fragaria x ananassa HOM05D008445 ORTHO05D011083 3.3e-12 77.0 108 45.4
RcHm_v2.0_Chr4g0422711 Rosa chinensis HOM05D007741 ORTHO05D011461 3.3e-12 77.0 116 43.1
FAN04G2478 Fragaria x ananassa HOM05D007761 ORTHO05D011461 4.3e-12 76.6 92 48.9
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 9.5e-12 75.5 90 50.0
FvH4_5g00140 Fragaria vesca HOM05D007761 ORTHO05D015647 1.2e-11 75.1 118 47.5
FAN08G3144 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.2e-11 75.1 92 47.8
FAN06G3287 Fragaria x ananassa HOM05D007761 ORTHO05D011461 3.6e-11 73.6 90 47.8
FAN24G0486 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.4e-10 71.6 105 43.8
FAN24G2207 Fragaria x ananassa HOM05D007761 ORTHO05D015647 1.4e-10 71.6 125 37.6
RcHm_v2.0_Chr6g0280951 Rosa chinensis HOM05D007761 ORTHO05D011461 1.8e-10 71.2 125 40.0
RcHm_v2.0_Chr2g0140171 Rosa chinensis HOM05D007741 ORTHO05D015647 4.0e-10 70.1 109 42.2
RcHm_v2.0_Chr2g0151251 Rosa chinensis HOM05D005636 ORTHO05D006912 3.4e-09 67.0 143 35.7
FAN13G3075 Fragaria x ananassa HOM05D001229 ORTHO05D001374 7.5e-09 65.9 125 35.2
FAN27G1253 Fragaria x ananassa HOM05D007761 ORTHO05D011461 7.5e-09 65.9 77 49.4
RcHm_v2.0_Chr1g0330531 Rosa chinensis HOM05D007741 ORTHO05D011461 7.5e-09 65.9 76 50.0
FAN21G0226 Fragaria x ananassa HOM05D007741 ORTHO05D208582 1.3e-08 65.1 121 39.7
RcHm_v2.0_Chr6g0280101 Rosa chinensis HOM05D007741 ORTHO05D343715 3.7e-08 63.5 76 48.7
RcHm_v2.0_Chr6g0295101 Rosa chinensis HOM05D007741 ORTHO05D035834 3.7e-08 63.5 119 38.7
FAN27G1809 Fragaria x ananassa HOM05D007761 ORTHO05D206830 1.4e-07 61.6 85 45.9
FAN09G3967 Fragaria x ananassa HOM05D008445 ORTHO05D011083 1.9e-07 61.2 53 60.4
FAN13G2057 Fragaria x ananassa HOM05D022609 ORTHO05D011083 1.9e-07 61.2 87 44.8
RcHm_v2.0_Chr7g0204591 Rosa chinensis HOM05D007741 ORTHO05D016318 4.1e-07 60.1 203 33.5
FAN09G1022 Fragaria x ananassa HOM05D007761 ORTHO05D011461 7.0e-07 59.3 66 51.5
FAN09G4565 Fragaria x ananassa HOM05D007761 ORTHO05D015647 7.0e-07 59.3 110 40.9
FAN28G0167 Fragaria x ananassa HOM05D008445 ORTHO05D011083 7.0e-07 59.3 66 53.0
FvH4_5g33161 Fragaria vesca HOM05D026847 ORTHO05D046448 1.2e-06 58.5 100 43.0
FAN16G0863 Fragaria x ananassa HOM05D000070 ORTHO05D003190 1.2e-06 58.5 120 36.7
FAN25G0843 Fragaria x ananassa HOM05D008445 ORTHO05D011083 1.6e-06 58.2 117 40.2
FAN03G0276 Fragaria x ananassa HOM05D007761 ORTHO05D011461 2.7e-06 57.4 64 46.9
FAN19G1218 Fragaria x ananassa HOM05D007741 ORTHO05D035834 2.7e-06 57.4 122 35.2
FAN15G0652 Fragaria x ananassa HOM05D007741 ORTHO05D014215 7.8e-06 55.8 115 39.1


User provided reference genes

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