Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0122 Fragaria x ananassa HOM05D004296 ORTHO05D005045 4.9e-153 544.7 324 100.0
FAN17G1800 Fragaria x ananassa HOM05D004296 ORTHO05D005045 7.9e-127 457.6 294 94.6
FvH4_4g36830 Fragaria vesca HOM05D004296 ORTHO05D005045 1.2e-114 417.2 274 94.2
FAN07G0166 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.9e-113 412.5 292 75.7
FAN12G1413 Fragaria x ananassa HOM05D004296 ORTHO05D005045 3.8e-113 412.1 276 92.0
RcHm_v2.0_Chr7g0197731 Rosa chinensis HOM05D004296 ORTHO05D005045 4.8e-108 395.2 292 76.0
FAN12G3540 Fragaria x ananassa HOM05D004296 ORTHO05D005045 6.3e-108 394.8 291 73.5
FvH4_5g02380 Fragaria vesca HOM05D004296 ORTHO05D005045 8.9e-94 347.8 281 70.1
FAN08G1593 Fragaria x ananassa HOM05D004296 ORTHO05D005045 8.9e-94 347.8 281 77.6
FAN04G1575 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.6e-93 346.3 281 66.9
Prupe.5G099900 Prunus persica HOM05D004296 ORTHO05D005045 1.3e-55 221.1 164 66.5
MD14G1104200 Malus domestica HOM05D004296 ORTHO05D005045 2.1e-55 220.3 304 60.2
Cfa013198 Carpinus fangiana HOM05D004296 ORTHO05D005045 5.8e-53 212.2 289 44.3
QL12p012797 Quercus lobata HOM05D004296 ORTHO05D005045 5.8e-53 212.2 299 43.1
MD07G1059600 Malus domestica HOM05D004296 ORTHO05D005045 1.7e-52 210.7 307 50.8
Haze_22818 Corylus avellana HOM05D004296 ORTHO05D005045 4.9e-52 209.1 289 44.3
FAN13G2230 Fragaria x ananassa HOM05D004296 ORTHO05D005045 3.0e-49 199.9 122 81.1
TAR268G0002 Trochodendron aralioides HOM05D004296 ORTHO05D005045 3.9e-49 199.5 300 41.0
Manes.01G061800 Manihot esculenta HOM05D004296 ORTHO05D005045 1.5e-48 197.6 276 45.3
CSS0030285 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 7.3e-48 195.3 295 41.7
Dinv38945 Davidia involucrata HOM05D004296 ORTHO05D005045 1.6e-47 194.1 283 40.3
Hma1.2p1_0896F.1_g234000 Hydrangea macrophylla HOM05D004296 ORTHO05D005045 1.6e-47 194.1 292 40.4
TAR375G1065 Trochodendron aralioides HOM05D004296 ORTHO05D005045 8.1e-47 191.8 300 40.3
CSS0003782 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.1e-46 191.4 295 41.7
Duzib068G1191 Durio zibethinus HOM05D004296 ORTHO05D005045 3.1e-46 189.9 288 42.7
Rhsim02G0231000 Rhododendron simsii HOM05D004296 ORTHO05D005045 6.9e-46 188.7 284 41.2
Nn1g01503 Nelumbo nucifera HOM05D004296 ORTHO05D005045 1.2e-45 188.0 304 40.8
CiPaw.08G074700 Carya illinoinensis HOM05D004296 ORTHO05D005045 4.5e-45 186.0 286 43.4
Eucgr.D01846 Eucalyptus grandis HOM05D004296 ORTHO05D005045 5.8e-45 185.7 297 41.8
Thecc.03G278500 Theobroma cacao HOM05D004296 ORTHO05D005045 7.6e-45 185.3 285 42.8
Atru.chr9.2192 Acer truncatum HOM05D004296 ORTHO05D005045 1.7e-44 184.1 292 42.5
Actinidia02008 Actinidia chinensis HOM05D004296 ORTHO05D005045 5.4e-43 179.1 285 46.0
Cc10_g03910 Coffea canephora HOM05D004296 ORTHO05D005045 2.1e-42 177.2 219 46.1
Ciclev10002111m.g Citrus clementina HOM05D004296 ORTHO05D005045 6.0e-42 175.6 281 48.8
Cpa.g.sc45.44 Carica papaya HOM05D004296 ORTHO05D005045 1.3e-41 174.5 300 41.0
Lj2A555T5 Lonicera japonica HOM05D004296 ORTHO05D005045 1.8e-41 174.1 223 43.9
TWI36G1592 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 1.8e-41 174.1 287 38.3
TWI18G1338 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 3.9e-41 172.9 285 38.2
COL.COLO4_34461 Corchorus olitorius HOM05D001502 ORTHO05D002950 5.1e-41 172.6 196 50.5
SalBow1G8718 Salvia bowleyana HOM05D004296 ORTHO05D005045 4.3e-40 169.5 284 37.7
Phvul.005G126900 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 5.6e-40 169.1 291 35.4
Migut.A00767 Erythranthe guttata HOM05D004296 ORTHO05D005045 7.4e-40 168.7 291 38.1
Glyma.01G220000 Glycine max HOM05D004296 ORTHO05D005045 9.6e-40 168.3 286 39.5
Gohir.D05G298900 Gossypium hirsutum HOM05D004296 ORTHO05D005045 9.6e-40 168.3 164 53.7
Sc01g0009550 Simmondsia chinensis HOM05D004296 ORTHO05D005045 1.3e-39 167.9 279 40.5
PGR031G2604 Punica granatum HOM05D004296 ORTHO05D005045 1.6e-39 167.5 227 44.9
DCAR_000614 Daucus carota HOM05D004296 ORTHO05D005045 2.1e-39 167.2 288 36.8
Gohir.A05G299133 Gossypium hirsutum HOM05D004296 ORTHO05D005045 2.1e-39 167.2 164 53.7
Lj8C228T3 Lonicera japonica HOM05D004296 ORTHO05D005045 2.1e-39 167.2 153 55.6
MSTRG.11985 Avicennia marina HOM05D004296 ORTHO05D005045 2.8e-39 166.8 283 37.8
MSTRG.11987 Avicennia marina HOM05D004296 ORTHO05D005045 4.8e-39 166.0 283 37.5
TPR.G3981 Trifolium pratense HOM05D004296 ORTHO05D005045 4.8e-39 166.0 281 37.7
Glyma.20G061500 Glycine max HOM05D004296 ORTHO05D005045 8.1e-39 165.2 290 37.6
QL05p087372 Quercus lobata HOM05D004296 ORTHO05D005045 2.4e-38 163.7 295 41.4
Gorai.009G316100 Gossypium raimondii HOM05D004296 ORTHO05D005045 3.1e-38 163.3 289 39.1
Cpa.g.sc39.99 Carica papaya HOM05D004296 ORTHO05D005045 5.3e-38 162.5 164 53.7
SGA_v2.0_scaffold96G28938 Striga asiatica HOM05D004296 ORTHO05D005045 5.3e-38 162.5 271 36.9
FAN18G3255 Fragaria x ananassa HOM05D004296 ORTHO05D005045 9.0e-38 161.8 91 84.6
VMungo1080G1277 Vigna mungo HOM05D004296 ORTHO05D005045 1.2e-37 161.4 298 36.2
CSS0037206 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 4.5e-37 159.5 295 41.0
Phvul.002G157700 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 5.8e-37 159.1 288 36.8
MBI18_g42175_MAGBIO Magnolia biondii HOM05D004296 ORTHO05D005045 1.0e-36 158.3 287 36.9
Medtr0768s0010 Medicago truncatula HOM05D004296 ORTHO05D005045 1.3e-36 157.9 288 37.2
AUR62007249 Chenopodium quinoa HOM05D004296 ORTHO05D005045 2.2e-36 157.1 320 35.6
SalBow7G4152 Salvia bowleyana HOM05D004296 ORTHO05D005045 2.2e-36 157.1 221 41.6
Lj8A231T11 Lonicera japonica HOM05D004296 ORTHO05D005045 2.9e-36 156.8 179 48.6
Psat7g254600 Pisum sativum HOM05D004296 ORTHO05D005045 3.8e-36 156.4 154 51.3
Ah.12g054620 Amaranthus hybridus HOM05D004296 ORTHO05D005045 4.9e-36 156.0 305 36.4
HanXRQChr03g0086721 Helianthus annuus HOM05D004296 ORTHO05D005045 6.5e-36 155.6 303 35.6
CSS0027171 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.4e-35 154.5 158 53.8
ClCG07G008080 Citrullus lanatus HOM05D004296 ORTHO05D005045 1.4e-35 154.5 306 37.9
Psat1g061240 Pisum sativum HOM05D004296 ORTHO05D005045 1.4e-35 154.5 155 49.7
Medtr6g011320 Medicago truncatula HOM05D004296 ORTHO05D005045 2.5e-35 153.7 291 36.1
Oeu009155.1 Olea europaea HOM05D004296 ORTHO05D005045 2.5e-35 153.7 305 34.8
CsaV3_4G005960 Cucumis sativus L. HOM05D004296 ORTHO05D005045 4.2e-35 152.9 335 34.3
LjContig00312_ERROPOS870357g0005117 Lotus japonicus HOM05D004296 ORTHO05D005045 4.2e-35 152.9 293 36.2
Potri.003G127200 Populus trichocarpa HOM05D004296 ORTHO05D005045 7.1e-35 152.1 184 47.3
HanXRQChr03g0086731 Helianthus annuus HOM05D004296 ORTHO05D005045 1.2e-34 151.4 309 35.3
CSS0028138 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.6e-34 151.0 158 52.5
PGSC0003DMG403005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 1.6e-34 151.0 154 50.6
MELO3C016352.2 Cucumis melo HOM05D004296 ORTHO05D005045 2.7e-34 150.2 334 33.8
Sopen04g002480 Solanum pennellii HOM05D004296 ORTHO05D005045 2.7e-34 150.2 159 50.9
EL10Ac8g19045 Beta vulgaris HOM05D004296 ORTHO05D005045 7.9e-34 148.7 291 35.7
Solyc04g007420.4 Solanum lycopersicum HOM05D004296 ORTHO05D005045 1.0e-33 148.3 159 50.3
PGSC0003DMG401005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 1.8e-33 147.5 154 50.0
Peaxi162Scf00119g00828 Petunia axillaris HOM05D004296 ORTHO05D005045 3.0e-33 146.7 324 33.6
Lsat_1_v5_gn_6_87401 Lactuca sativa HOM05D004296 ORTHO05D005045 5.1e-33 146.0 291 34.0
Hund17074 Selenicereus undatus HOM05D004296 ORTHO05D005045 5.1e-33 146.0 285 36.8
Peaxi162Scf00014g00082 Petunia axillaris HOM05D004296 ORTHO05D005045 6.7e-33 145.6 296 35.5
Hund05589 Selenicereus undatus HOM05D004296 ORTHO05D005045 6.7e-33 145.6 182 47.8
Lalb_Chr20g0109121 Lupinus albus HOM05D004296 ORTHO05D005045 1.1e-32 144.8 286 34.3
Sopen08g029360 Solanum pennellii HOM05D004296 ORTHO05D005045 1.9e-32 144.1 144 50.0
arahy.Tifrunner.gnm1.ann1.KQ253K Arachis hypogaea HOM05D004296 ORTHO05D005045 7.4e-32 142.1 202 40.1
FvH4_4g24221 Fragaria vesca HOM05D004296 ORTHO05D005045 7.4e-32 142.1 145 61.4
Lsat_1_v5_gn_5_92680 Lactuca sativa HOM05D004296 ORTHO05D005045 7.4e-32 142.1 273 34.8
ECA240G3612 Erigeron canadensis HOM05D004296 ORTHO05D005045 9.6e-32 141.7 129 52.7
Oeu020615.1 Olea europaea HOM05D004296 ORTHO05D005045 1.3e-31 141.4 195 43.6
PSO210G3801 Papaver somniferum HOM05D004296 ORTHO05D005045 1.3e-31 141.4 164 45.7
PGSC0003DMG400012342 Solanum tuberosum HOM05D004296 ORTHO05D005045 1.3e-31 141.4 154 48.7
BcaB06g27609 Brassica carinata HOM05D004296 ORTHO05D005045 3.7e-31 139.8 139 51.8
A04p14410 Brassica napus HOM05D004296 ORTHO05D005045 4.8e-31 139.4 138 50.7
BraA04t17088Z Brassica rapa HOM05D004296 ORTHO05D005045 4.8e-31 139.4 138 50.7
Solyc08g081040.3 Solanum lycopersicum HOM05D004296 ORTHO05D005045 4.8e-31 139.4 158 46.8
PSO782G5383 Papaver somniferum HOM05D004296 ORTHO05D005045 6.2e-31 139.0 325 34.2
Aqoxy3G03757 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 8.2e-31 138.7 207 40.6
TPR.G4254 Trifolium pratense HOM05D004296 ORTHO05D005045 8.2e-31 138.7 165 44.8
arahy.Tifrunner.gnm1.ann1.SKNY54 Arachis hypogaea HOM05D004296 ORTHO05D005045 1.1e-30 138.3 202 39.6
Nitab4.5_0001615g0200 Nicotiana tabacum HOM05D004296 ORTHO05D005045 1.1e-30 138.3 162 49.4
Sed0022715 Sechium edule HOM05D004296 ORTHO05D005045 1.1e-30 138.3 144 51.4
arahy.Tifrunner.gnm1.ann1.CEX2YD Arachis hypogaea HOM05D004296 ORTHO05D005045 1.8e-30 137.5 202 40.1
Nitab4.5_0011683g0020 Nicotiana tabacum HOM05D004296 ORTHO05D005045 4.1e-30 136.3 328 32.0
Carub.0007s3425 Capsella rubella HOM05D004296 ORTHO05D005045 5.3e-30 136.0 183 42.1
AL7G48180 Arabidopsis lyrata HOM05D004296 ORTHO05D005045 9.0e-30 135.2 182 42.3
THA.LOC104809392 Tarenaya hassleriana HOM05D004296 ORTHO05D005045 9.0e-30 135.2 183 43.2
C04p48320 Brassica napus HOM05D004296 ORTHO05D005045 2.0e-29 134.0 276 34.4
CAN.G774.35 Capsicum annuum HOM05D004296 ORTHO05D005045 2.0e-29 134.0 303 34.3
PSO478G0046 Papaver somniferum HOM05D004296 ORTHO05D005045 2.6e-29 133.7 296 34.8
Aa31LG9G640 Aethionema arabicum HOM05D004296 ORTHO05D005045 1.0e-28 131.7 187 42.8
Sp7g00660 Schrenkiella parvula HOM05D004296 ORTHO05D005045 1.0e-28 131.7 276 36.2
SpUn0010_0140 Schrenkiella parvula HOM05D004296 ORTHO05D005045 1.0e-28 131.7 276 36.2
Lalb_Chr09g0320981 Lupinus albus HOM05D004296 ORTHO05D005045 1.7e-28 131.0 142 45.1
unitig_32.g11599 Utricularia gibba HOM05D004296 ORTHO05D005045 2.9e-28 130.2 272 34.2
AUR62018749 Chenopodium quinoa HOM05D004296 ORTHO05D005045 8.4e-28 128.6 341 32.6
SHI24854 Sapria himalayana HOM05D004296 ORTHO05D005045 1.4e-27 127.9 183 41.5
BcaC02g08973 Brassica carinata HOM05D004296 ORTHO05D005045 3.2e-27 126.7 292 31.8
BolC4t26425H Brassica oleracea HOM05D004296 ORTHO05D005045 3.2e-27 126.7 292 31.8
HPP92_021782 Vanilla planifolia HOM05D004296 ORTHO05D005045 3.2e-27 126.7 163 44.2
Actinidia14560 Actinidia chinensis HOM05D004296 ORTHO05D005045 4.2e-27 126.3 277 33.6
Aqoxy3G00118 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 4.6e-26 122.9 151 44.4
Rhsim02G0230400 Rhododendron simsii HOM05D004296 ORTHO05D005045 6.1e-26 122.5 281 33.1
CDE04G2006 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 7.9e-26 122.1 147 45.6
Carub.0001s0729 Capsella rubella HOM05D004296 ORTHO05D005045 1.8e-25 120.9 172 39.0
Thhalv10028247m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 2.3e-25 120.6 182 37.9
CDE01G0178 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 3.0e-25 120.2 141 44.7
CARHR213060 Cardamine hirsuta HOM05D004296 ORTHO05D005045 3.9e-25 119.8 183 39.9
Os01g0541600 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 6.7e-25 119.0 153 41.2
AT5G41270 Arabidopsis thaliana HOM05D004296 ORTHO05D005045 5.7e-24 115.9 267 30.3
Zm00001eb162950 Zea mays HOM05D004296 ORTHO05D005045 1.3e-23 114.8 147 40.8
CAN.G1069.19 Capsicum annuum HOM05D004296 ORTHO05D005045 2.2e-23 114.0 118 53.4
Rhsim02G0230900 Rhododendron simsii HOM05D004296 ORTHO05D005045 3.7e-23 113.2 156 44.2
ATR0680G148 Amborella trichopoda HOM05D004296 ORTHO05D005045 4.8e-23 112.8 132 42.4
arahy.Tifrunner.gnm1.ann1.W3QJXS Arachis hypogaea HOM05D004296 ORTHO05D005045 1.8e-22 110.9 161 41.6
Psat0s5346g0040 Pisum sativum HOM05D002378 ORTHO05D002936 6.9e-22 109.0 220 34.5
SEGI_21744 Sequoiadendron giganteum HOM05D004296 ORTHO05D005045 5.9e-21 105.9 157 39.5
Sabra01G0078900 Salix brachista HOM05D004296 ORTHO05D005045 1.7e-20 104.4 122 53.3
Haze_21601 Corylus avellana HOM05D004296 ORTHO05D005045 8.5e-20 102.1 223 34.5
Mapoly0057s0058 Marchantia polymorpha HOM05D004296 ORTHO05D005045 1.4e-17 94.7 116 41.4
PSO210G3847 Papaver somniferum HOM05D004296 ORTHO05D005045 1.4e-17 94.7 261 30.7
Thhalv10027895m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 1.8e-17 94.4 182 34.1
Sed0002821 Sechium edule HOM05D004296 ORTHO05D005045 2.3e-17 94.0 189 35.4
Oeu009158.1 Olea europaea HOM05D004296 ORTHO05D005045 5.3e-14 82.8 148 36.5
Nitab4.5_0003441g0080 Nicotiana tabacum HOM05D004296 ORTHO05D005045 9.1e-14 82.0 83 50.6
Os01g0531000 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 9.1e-14 82.0 90 43.3
ATR0680G137 Amborella trichopoda HOM05D004296 ORTHO05D005045 4.2e-11 73.2 57 59.6
Pp3c22_14200 Physcomitrium patens HOM05D004296 ORTHO05D005045 9.4e-11 72.0 170 32.4
PGSC0003DMG402005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 6.1e-10 69.3 76 46.1
AagrBONN_evm.TU.Sc2ySwM_228.2126 Anthoceros agrestis HOM05D004296 ORTHO05D005045 2.8e-07 60.5 161 30.4
Cfa014102 Carpinus fangiana HOM05D004296 ORTHO05D005045 2.8e-07 60.5 54 50.0
Mapoly0057s0052 Marchantia polymorpha HOM05D004296 ORTHO05D005045 4.8e-07 59.7 88 35.2


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