Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0091 Fragaria x ananassa HOM05D001765 ORTHO05D005876 3.3e-91 339.0 262 100.0
FvH4_4g19461 Fragaria vesca HOM05D001765 ORTHO05D005876 4.5e-88 328.6 204 97.1
MD13G1156300 Malus domestica HOM05D001765 ORTHO05D005876 4.4e-75 285.4 197 89.8
Atru.chr4.3029 Acer truncatum HOM05D001765 ORTHO05D005876 7.4e-75 284.6 205 86.3
Prupe.1G122100 Prunus persica HOM05D001765 ORTHO05D005876 3.7e-74 282.3 197 85.3
Prupe.1G073200 Prunus persica HOM05D001765 ORTHO05D005876 1.2e-72 277.3 198 86.9
MD16G1157200 Malus domestica HOM05D001765 ORTHO05D005876 3.8e-71 272.3 189 82.0
RcHm_v2.0_Chr4g0424571 Rosa chinensis HOM05D001765 ORTHO05D005876 1.9e-70 270.0 203 86.7
Gohir.A10G171300 Gossypium hirsutum HOM05D001765 ORTHO05D005876 3.2e-70 269.2 205 83.4
TAR365G0409 Trochodendron aralioides HOM05D001765 ORTHO05D005876 4.7e-69 265.4 202 83.7
CiPaw.02G075900 Carya illinoinensis HOM05D001765 ORTHO05D005876 2.3e-68 263.1 197 85.3
Cpa.g.sc9.87 Carica papaya HOM05D001765 ORTHO05D005876 3.0e-68 262.7 196 77.0
TAR633G2429 Trochodendron aralioides HOM05D001765 ORTHO05D005876 6.8e-68 261.5 201 79.1
TWI09G0718 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 1.2e-67 260.8 193 81.9
Duzib052G0074 Durio zibethinus HOM05D001765 ORTHO05D005876 9.7e-67 257.7 204 82.4
Gorai.011G199400 Gossypium raimondii HOM05D001765 ORTHO05D005876 1.3e-66 257.3 204 83.8
Haze_17391 Corylus avellana HOM05D001765 ORTHO05D005876 1.7e-66 256.9 193 85.0
Gohir.D10G178400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 8.3e-66 254.6 204 83.3
Ca_21450_v3 Cicer arietinum L. HOM05D001765 ORTHO05D005876 1.1e-65 254.2 199 75.4
CiPaw.01G139800 Carya illinoinensis HOM05D001765 ORTHO05D005876 1.4e-65 253.8 193 75.6
COL.COLO4_11257 Corchorus olitorius HOM05D001765 ORTHO05D005876 1.2e-64 250.8 205 74.6
vmacro08062 Vaccinium macrocarpon HOM05D001765 ORTHO05D005876 1.6e-64 250.4 196 79.6
MBI19_g07244_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 2.7e-64 249.6 207 75.4
Haze_01276 Corylus avellana HOM05D001765 ORTHO05D005876 1.0e-63 247.7 190 83.2
Rhsim04G0234200 Rhododendron simsii HOM05D001765 ORTHO05D005876 1.3e-63 247.3 197 80.7
CANSAT78G1829 Cannabis sativa HOM05D001765 ORTHO05D005876 3.8e-63 245.7 151 87.4
Lj6P689T37 Lonicera japonica HOM05D001765 ORTHO05D005876 3.8e-63 245.7 207 77.8
Thecc.04G297600 Theobroma cacao HOM05D001765 ORTHO05D005876 5.0e-63 245.4 193 82.9
Ciclev10005673m.g Citrus clementina HOM05D001765 ORTHO05D005876 8.5e-63 244.6 152 86.2
Cc03_g00980 Coffea canephora HOM05D001765 ORTHO05D005876 8.5e-63 244.6 194 83.0
Actinidia40362 Actinidia chinensis HOM05D001765 ORTHO05D005876 1.1e-62 244.2 196 75.5
Nn4g25612 Nelumbo nucifera HOM05D001765 ORTHO05D005876 1.9e-62 243.4 150 86.7
CSS0034555 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 3.2e-62 242.7 196 78.1
Nitab4.5_0000276g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 7.2e-62 241.5 195 80.5
Peaxi162Scf00065g00002 Petunia axillaris HOM05D001765 ORTHO05D005876 9.4e-62 241.1 198 80.8
Gorai.006G079200 Gossypium raimondii HOM05D001765 ORTHO05D005876 1.2e-61 240.7 194 84.0
COL.COLO4_34649 Corchorus olitorius HOM05D001765 ORTHO05D005123 2.1e-61 240.0 207 71.0
Nn3g21679 Nelumbo nucifera HOM05D001765 ORTHO05D005876 2.1e-61 240.0 194 74.2
TWI73G0761 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 2.7e-61 239.6 194 78.9
QL06p011625 Quercus lobata HOM05D001765 ORTHO05D005876 4.7e-61 238.8 151 85.4
Sc13g0006420 Simmondsia chinensis HOM05D001765 ORTHO05D005876 8.0e-61 238.0 206 68.9
CAN.G874.72 Capsicum annuum HOM05D001765 ORTHO05D005876 1.0e-60 237.7 206 79.1
AUR62037504 Chenopodium quinoa HOM05D001765 ORTHO05D005876 1.8e-60 236.9 152 84.2
Nitab4.5_0000456g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.8e-60 236.9 195 79.5
Potri.010G142400 Populus trichocarpa HOM05D001765 ORTHO05D005876 1.8e-60 236.9 193 82.4
CDE12G0657 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 4.0e-60 235.7 152 83.6
ClCG06G004640 Citrullus lanatus HOM05D001765 ORTHO05D005876 2.0e-59 233.4 145 84.8
Gohir.D09G064400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 2.0e-59 233.4 189 82.0
Sopen01g026230 Solanum pennellii HOM05D001765 ORTHO05D005876 3.4e-59 232.6 201 77.1
Glyma.07G241300 Glycine max HOM05D001765 ORTHO05D005876 4.4e-59 232.3 152 83.6
ATR0706G059 Amborella trichopoda HOM05D001765 ORTHO05D005876 5.7e-59 231.9 145 85.5
Gohir.A09G065500 Gossypium hirsutum HOM05D001765 ORTHO05D005876 5.7e-59 231.9 152 84.9
EL10Ac4g08905 Beta vulgaris HOM05D001765 ORTHO05D005876 7.5e-59 231.5 152 80.9
Glyma.17G032500 Glycine max HOM05D001765 ORTHO05D005876 7.5e-59 231.5 152 82.9
Phvul.003G112500 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 1.7e-58 230.3 199 77.9
PGR031G3587 Punica granatum HOM05D001765 ORTHO05D005876 1.7e-58 230.3 205 74.1
Aqoxy1G02157 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 2.2e-58 229.9 152 81.6
Solyc01g060030.3 Solanum lycopersicum HOM05D001765 ORTHO05D005876 2.2e-58 229.9 196 77.6
Sed0022335 Sechium edule HOM05D001765 ORTHO05D005876 2.8e-58 229.6 145 83.4
Ah.04g162900 Amaranthus hybridus HOM05D001765 ORTHO05D005876 3.7e-58 229.2 152 81.6
Nitab4.5_0004323g0040 Nicotiana tabacum HOM05D001765 ORTHO05D005876 3.7e-58 229.2 193 78.2
AUR62004747 Chenopodium quinoa HOM05D001765 ORTHO05D005876 4.8e-58 228.8 138 88.4
Lalb_Chr13g0298421 Lupinus albus HOM05D001765 ORTHO05D005876 4.8e-58 228.8 153 81.7
THA.LOC104818892 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 4.8e-58 228.8 152 81.6
Ciclev10016311m.g Citrus clementina HOM05D001765 ORTHO05D005876 8.3e-58 228.0 133 91.0
Potri.008G107100 Populus trichocarpa HOM05D001765 ORTHO05D005876 8.3e-58 228.0 193 81.3
Sabra10G0110100 Salix brachista HOM05D001765 ORTHO05D005876 8.3e-58 228.0 198 79.3
Duzib151G0385 Durio zibethinus HOM05D001765 ORTHO05D005876 1.4e-57 227.3 150 84.0
THA.LOC104802705 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 3.1e-57 226.1 205 71.2
Nitab4.5_0010629g0030 Nicotiana tabacum HOM05D001765 ORTHO05D005876 4.1e-57 225.7 196 78.6
SEGI_21194 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 4.1e-57 225.7 145 84.1
SEGI_31674 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 4.1e-57 225.7 145 84.1
Aqoxy5G01535 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 5.4e-57 225.3 152 80.9
CsaV3_2G015100 Cucumis sativus L. HOM05D001765 ORTHO05D005876 5.4e-57 225.3 134 89.6
MELO3C023334.2 Cucumis melo HOM05D001765 ORTHO05D005876 7.0e-57 224.9 133 89.5
Lalb_Chr07g0182091 Lupinus albus HOM05D001765 ORTHO05D005876 7.0e-57 224.9 142 85.2
TPR.G16856 Trifolium pratense HOM05D001765 ORTHO05D005876 7.0e-57 224.9 142 85.2
CSS0002630 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 9.1e-57 224.6 184 73.4
unitig_749.g13366 Utricularia gibba HOM05D001765 ORTHO05D005876 9.1e-57 224.6 152 82.2
VMungo1215G2482 Vigna mungo HOM05D001765 ORTHO05D005876 1.2e-56 224.2 152 82.9
Manes.03G202700 Manihot esculenta HOM05D001765 ORTHO05D005876 1.6e-56 223.8 150 82.0
Dinv44303 Davidia involucrata HOM05D001765 ORTHO05D005876 2.7e-56 223.0 151 82.1
Hma1.2p1_0013F.1_g008730 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 2.7e-56 223.0 208 74.5
SGA_v2.0_scaffold119G32663 Striga asiatica HOM05D001765 ORTHO05D005876 5.9e-56 221.9 145 83.4
Sabra08G0081000 Salix brachista HOM05D001765 ORTHO05D005876 7.7e-56 221.5 147 82.3
PSO210G5285 Papaver somniferum HOM05D001765 ORTHO05D005876 1.3e-55 220.7 187 67.4
VMungo0647G0513 Vigna mungo HOM05D000091 ORTHO05D005533 5.0e-55 218.8 141 84.4
Eucgr.A00351 Eucalyptus grandis HOM05D001765 ORTHO05D005876 1.5e-54 217.2 152 78.3
Psat4g024600 Pisum sativum HOM05D001765 ORTHO05D005876 1.5e-54 217.2 188 69.1
Sp2g19740 Schrenkiella parvula HOM05D001765 ORTHO05D005876 1.5e-54 217.2 153 80.4
SpUn0021_0110 Schrenkiella parvula HOM05D001765 ORTHO05D005876 1.5e-54 217.2 153 80.4
Hma1.2p1_0078F.1_g040010 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 1.9e-54 216.9 145 80.7
arahy.Tifrunner.gnm1.ann1.03CYAA Arachis hypogaea HOM05D001765 ORTHO05D005876 2.5e-54 216.5 133 87.2
MSTRG.21776 Avicennia marina HOM05D001765 ORTHO05D005876 2.5e-54 216.5 153 79.7
Thhalv10004753m.g Eutrema salsugineum HOM05D001765 ORTHO05D005876 2.5e-54 216.5 144 84.7
PSO761G0153 Papaver somniferum HOM05D001765 ORTHO05D005876 3.3e-54 216.1 191 67.0
Oeu063485.1 Olea europaea HOM05D001765 ORTHO05D005876 5.5e-54 215.3 194 73.7
Aqoxy5G02976 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 7.2e-54 214.9 145 80.7
Oeu001465.1 Olea europaea HOM05D001765 ORTHO05D005876 9.5e-54 214.5 151 78.1
Sed0021764 Sechium edule HOM05D001765 ORTHO05D005876 9.5e-54 214.5 130 90.0
A06p38370 Brassica napus HOM05D001765 ORTHO05D005876 1.2e-53 214.2 150 80.0
BraA06t26751Z Brassica rapa HOM05D001765 ORTHO05D005876 1.2e-53 214.2 150 80.0
Migut.N00048 Erythranthe guttata HOM05D001765 ORTHO05D005876 1.6e-53 213.8 145 80.7
Carub.0008s0928 Capsella rubella HOM05D001765 ORTHO05D005876 2.1e-53 213.4 148 81.1
Phvul.008G245800 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 2.1e-53 213.4 144 81.9
Phvul.009G074533 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 2.1e-53 213.4 144 81.9
BolC7t44518H Brassica oleracea HOM05D001765 ORTHO05D005876 2.8e-53 213.0 148 80.4
HanXRQChr05g0145931 Helianthus annuus HOM05D001765 ORTHO05D005876 3.6e-53 212.6 147 81.0
AL8G23110 Arabidopsis lyrata HOM05D001765 ORTHO05D005876 1.0e-52 211.1 148 79.7
BcaC06g30699 Brassica carinata HOM05D001765 ORTHO05D005876 1.0e-52 211.1 140 82.1
Lsat_1_v5_gn_6_116901 Lactuca sativa HOM05D001765 ORTHO05D005876 1.0e-52 211.1 152 78.3
BcaNung02601 Brassica carinata HOM05D001765 ORTHO05D005876 1.4e-52 210.7 148 79.7
C07p39890 Brassica napus HOM05D001765 ORTHO05D005876 1.4e-52 210.7 148 79.7
CARHR182130 Cardamine hirsuta HOM05D001765 ORTHO05D005876 1.8e-52 210.3 140 82.1
Lj4g0023600 Lotus japonicus HOM05D001765 ORTHO05D005876 1.8e-52 210.3 196 76.5
AT5G49400 Arabidopsis thaliana HOM05D001765 ORTHO05D005876 2.3e-52 209.9 148 79.7
C02p57300 Brassica napus HOM05D001765 ORTHO05D003527 2.3e-52 209.9 195 74.4
BolC2t11799H Brassica oleracea HOM05D001765 ORTHO05D003527 2.3e-52 209.9 195 74.4
CDE01G0626 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 3.0e-52 209.5 151 76.2
Aa31LG11G7990 Aethionema arabicum HOM05D001765 ORTHO05D005876 4.0e-52 209.1 185 73.0
ECA246G2338 Erigeron canadensis HOM05D001765 ORTHO05D005876 5.2e-52 208.8 151 78.8
BcaC03g17719 Brassica carinata HOM05D001765 ORTHO05D005876 6.8e-52 208.4 151 77.5
DCAR_002506 Daucus carota HOM05D001765 ORTHO05D005876 6.8e-52 208.4 147 81.0
A02p38130 Brassica napus HOM05D001765 ORTHO05D003527 7.5e-51 204.9 197 73.1
Os11g0199600 Oryza sativa ssp. japonica HOM05D001765 ORTHO05D005876 1.2e-48 197.6 146 75.3
Pp3c14_13970 Physcomitrium patens HOM05D001765 ORTHO05D005876 1.3e-47 194.1 138 77.5
BraA02t08788Z Brassica rapa HOM05D001765 ORTHO05D005876 2.3e-47 193.4 207 69.1
Mapoly0023s0038 Marchantia polymorpha HOM05D001765 ORTHO05D005876 2.3e-47 193.4 147 77.6
Zm00001eb328920 Zea mays HOM05D001765 ORTHO05D005876 6.6e-47 191.8 143 74.8
Zm00001eb109890 Zea mays HOM05D001765 ORTHO05D005876 8.6e-47 191.4 150 72.0
AagrBONN_evm.TU.Sc2ySwM_362.810 Anthoceros agrestis HOM05D001765 ORTHO05D005876 5.6e-46 188.7 157 70.7
BcaB07g34154 Brassica carinata HOM05D001765 ORTHO05D005876 1.3e-42 177.6 131 76.3
Manes.15G005450 Manihot esculenta HOM05D001765 ORTHO05D005876 1.1e-41 174.5 132 72.7
Nitab4.5_0004323g0070 Nicotiana tabacum HOM05D001765 ORTHO05D005876 2.7e-40 169.9 115 85.2
Mapoly0171s0012 Marchantia polymorpha HOM05D001765 ORTHO05D005876 3.5e-40 169.5 133 69.2
MBI19_g17409_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 4.6e-40 169.1 207 60.9
Pp3c14_17690 Physcomitrium patens HOM05D001765 ORTHO05D005876 2.5e-38 163.3 131 68.7
AagrBONN_evm.TU.Sc2ySwM_228.5656 Anthoceros agrestis HOM05D001765 ORTHO05D005876 1.2e-37 161.0 121 77.7
CBR_g53494 Chara braunii HOM05D000188 ORTHO05D005876 1.2e-32 144.4 135 63.7
SMO340G0272 Selaginella moellendorffii HOM05D001765 ORTHO05D005876 6.0e-32 142.1 109 67.9
GSVIVG01035017001 Vitis vinifera HOM05D001765 ORTHO05D005876 8.6e-31 138.3 87 93.1
Zm00001eb091100 Zea mays HOM05D001765 ORTHO05D005876 1.2e-29 134.4 128 60.2
Zm00001eb276930 Zea mays HOM05D001765 ORTHO05D005876 3.6e-29 132.9 109 68.8
SEGI_08255 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 7.6e-27 125.2 113 65.5
ATR1159G054 Amborella trichopoda HOM05D001765 ORTHO05D005876 4.6e-24 115.9 80 70.0
Lsat_1_v5_gn_6_18261 Lactuca sativa HOM05D001765 ORTHO05D005876 4.6e-24 115.9 139 54.7
CAN.G201.7 Capsicum annuum HOM05D001765 ORTHO05D005876 1.0e-23 114.8 205 52.7
HanXRQChr13g0395311 Helianthus annuus HOM05D001765 ORTHO05D005876 8.6e-23 111.7 108 59.3
ECA233G0063 Erigeron canadensis HOM05D001765 ORTHO05D005876 5.6e-22 109.0 141 52.5
Medtr1g032030 Medicago truncatula HOM05D001765 ORTHO05D005876 5.2e-20 102.4 81 76.5
Medtr1g032370 Medicago truncatula HOM05D001765 ORTHO05D005876 5.2e-20 102.4 81 76.5
Zm00001eb408400 Zea mays HOM05D001765 ORTHO05D005876 7.6e-19 98.6 87 69.0
CAN.G197.3 Capsicum annuum HOM05D001765 ORTHO05D005876 2.3e-15 87.0 72 72.2
ATR1159G071 Amborella trichopoda HOM05D001765 ORTHO05D005876 3.0e-15 86.7 66 81.8
ATR1159G066 Amborella trichopoda HOM05D001765 ORTHO05D005876 2.5e-14 83.6 64 79.7
Cre12.g529200 Chlamydomonas reinhardtii HOM05D001765 ORTHO05D005876 5.1e-07 59.3 40 60.0


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